RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 IFNA5P01569 189 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 TRBV12-3P01733 135 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 IGHV3-11P01762 117 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 IGLC1P0CG04 106 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 RAB5AP20339 215 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 GATA2P23769 480 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-205ENST00000462254 OR10J1P30954 320 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 GPX4P36969 197 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-205ENST00000462254 CEBPGP53567 150 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 KRTAP10-3P60369 221 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 PAFAH1B2P68402 229 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 ZNF90Q03938 601 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 C15orf32Q32M92 178 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 TCTEX1D4Q5JR98 221 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 FAM74A1Q5RGS3 127 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 MIC13Q5XKP0 118 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 TEX261Q6UWH6 196 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 C18orf65Q6ZTR6 163 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 MRPL52Q86TS9 123 aaKnown RBP3.47□□□□□ -1.85
CSMD3-205ENST00000462254 CBLN2Q8IUK8 224 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 FAM223AQ8IWN6 122 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-205ENST00000462254 OR4X1Q8NH49 305 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 C11orf45Q8TAV5 145 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 VN1R17PQ8TDU5 208 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 PGLYRP4Q96LB8 373 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 OCR1Q9BZK8 76 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 VSIRQ9H7M9 311 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 GNB4Q9HAV0 340 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 C21orf62Q9NYP8 219 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 TCRBV4S1A1TA0A5B7 111 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 OR2T8A6NH00 312 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 ZFP92A6NM28 416 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 PPP5D1E7EU14 171 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 CYB5BO43169 146 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 TGOLN2O43493 480 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 GNG7O60262 68 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 YIF1AO95070 293 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 IGKV1-17P01599 117 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 ORM1P02763 201 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 CTSGP08311 255 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 SEC11BP0C7V7 166 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 LINC00869P0C866 280 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 CD28P10747 220 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 M6PRP20645 277 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 NDUFV3P56181 108 aaKnown RBP3.46□□□□□ -1.86
CSMD3-205ENST00000462254 RPL32P62910 135 aaKnown RBP3.46□□□□□ -1.86
CSMD3-205ENST00000462254 EIF5AP63241 154 aaKnown RBP3.46□□□□□ -1.86
CSMD3-205ENST00000462254 ATP5G2Q06055 141 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 KRTAP24-1Q3LI83 254 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 COX19Q49B96 90 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 Q56UQ5 140 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 GCSAMLQ5JQS6 135 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 ZNF343Q6P1L6 599 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 CLEC19AQ6UXS0 136 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 Q6ZN92 141 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 CYP2G1PQ6ZSU1 146 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 ZNF680Q8NEM1 530 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 OR2G3Q8NGZ4 309 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 SCGB1C1Q8TD33 95 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 PHYHIPLQ96FC7 376 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 USMG5Q96IX5 58 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 TRGV9Q99603 122 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 PSMG3Q9BT73 122 aaPredicted RBP3.46□□□□□ -1.86
CSMD3-205ENST00000462254 ZNF256Q9Y2P7 627 aaPredicted RBP3.46□□□□□ -1.86
CSMD3-205ENST00000462254 TIMM9Q9Y5J7 89 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 PXMP4Q9Y6I8 212 aa3.46□□□□□ -1.86
CSMD3-205ENST00000462254 TRAV30A0A087WSZ9 112 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.45□□□□□ -1.86
CSMD3-205ENST00000462254 TRBV7-1A0A0A6YYK4 115 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 IGHV3-35A0A0C4DH35 117 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 A0A0G2JLM5 398 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 CLPSL1A2RUU4 121 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 KRTAP29-1A8MX34 341 aaPredicted RBP3.45□□□□□ -1.86
CSMD3-205ENST00000462254 C17orf112F2Z3M2 114 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 F6UB75 175 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 I3L521 148 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 BMPR1BO00238 502 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 LGALS1P09382 135 aaKnown RBP3.45□□□□□ -1.86
CSMD3-205ENST00000462254 SULT1A2P50226 295 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 RAB2AP61019 212 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 YPEL3P61236 119 aaPredicted RBP3.45□□□□□ -1.86
CSMD3-205ENST00000462254 PATE2Q6UY27 113 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 FAM19A1Q7Z5A9 133 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 OR4X2Q8NGF9 303 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 GNPNAT1Q96EK6 184 aaPredicted RBP3.45□□□□□ -1.86
CSMD3-205ENST00000462254 UBE2E2Q96LR5 201 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 HIST1H4GQ99525 98 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 SLC39A9Q9NUM3 307 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 DOK5Q9P104 306 aa3.45□□□□□ -1.86
CSMD3-205ENST00000462254 NIPBLQ6KC79 2804 aaeCLIP3.45□□□□□ -1.86
CSMD3-205ENST00000462254 MAST4O15021 2626 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 IGHV3OR16-8A0A075B7F1 116 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 WI2-2373I1.2A0A1W2PRP0 233 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 NUPL2O15504 423 aaKnown RBP3.44□□□□□ -1.86
CSMD3-205ENST00000462254 IFNA7P01567 189 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 IL4P05112 153 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 NMBP08949 121 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 OR5G3P0C626 314 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 LYZP61626 148 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms