RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	RAB2A	P61019	212 aa		5.93	□□□□□ -1.46
ITSN1-222	ENST00000462212	UBE2L3	P68036	154 aa	Known RBP	5.93	□□□□□ -1.46
ITSN1-222	ENST00000462212	ERCC8	Q13216	396 aa		5.93	□□□□□ -1.46
ITSN1-222	ENST00000462212	PQLC2	Q6ZP29	291 aa		5.93	□□□□□ -1.46
ITSN1-222	ENST00000462212	HSD17B11	Q8NBQ5	300 aa		5.93	□□□□□ -1.46
ITSN1-222	ENST00000462212	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.93	□□□□□ -1.46
ITSN1-222	ENST00000462212	RNASE8	Q8TDE3	154 aa	Known RBP	5.93	□□□□□ -1.46
ITSN1-222	ENST00000462212	TMEM263	Q8WUH6	116 aa	Known RBP	5.93	□□□□□ -1.46
ITSN1-222	ENST00000462212	DNAH6	Q9C0G6	4158 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	FXYD6-FXYD2	A0A087WZ82	144 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	TRBV7-9	A0A0J9YWB2	115 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	RBAKDN	A6NC62	111 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	IGKV2D-40	P01614	121 aa	Predicted RBP	5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	SLC25A5	P05141	298 aa	Known RBP	5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	NMB	P08949	121 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	ATP6V0C	P27449	155 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	RAN	P62826	216 aa	Known RBP	5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	SERF2	P84101	59 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	FAM122C	Q6P4D5	195 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	ZNF493	Q6ZR52	646 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	ZFAND2A	Q8N6M9	145 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	OR10G4	Q8NGN3	311 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	OR10G9	Q8NGN4	311 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	OR10G7	Q8NGN6	311 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	C16orf74	Q96GX8	76 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	FAM210B	Q96KR6	192 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	VGLL1	Q99990	258 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212		Q9H3A6	140 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	ZNF492	Q9P255	531 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	VPS13D	Q5THJ4	4388 aa		5.92	□□□□□ -1.46
ITSN1-222	ENST00000462212	TRAV12-3	A0A0B4J271	114 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212		A0A1W2PPV4	95 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	C7orf71	A4D174	169 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	ZNF324	O75467	553 aa	Predicted RBP	5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	EIF3G	O75821	320 aa	Known RBP eCLIP	5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	MB	P02144	154 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	STAG3L2	P0CL84	134 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	STAG3L3	P0CL85	134 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	CDC34	P49427	236 aa	Predicted RBP	5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	DAD1	P61803	113 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	RPL7L1	Q6DKI1	246 aa	Known RBP	5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	ARL6IP6	Q8N6S5	226 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	LINC00612	Q8N6U2	182 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	SUN5	Q8TC36	379 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	PYGO2	Q9BRQ0	406 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	LINC00467	Q9BRT7	94 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	SH3BGRL3	Q9H299	93 aa		5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	5.91	□□□□□ -1.46
ITSN1-222	ENST00000462212	BORCS7-ASMT	A0A0B4J1R7	106 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	DIRC3	C9JPN6	131 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212		J3KRW8	73 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	ARL14EPL	P0DKL9	152 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	HTN1	P15515	57 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	CSN1S1	P47710	185 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	ZNF138	P52744	262 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	CD300C	Q08708	224 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	TMEM78	Q5T7P6	136 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	PRR9	Q5T870	116 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	RXFP4	Q8TDU9	374 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	TMED6	Q8WW62	240 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	RAB24	Q969Q5	203 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	GNPNAT1	Q96EK6	184 aa	Predicted RBP	5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	NDUFAF3	Q9BU61	184 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	OTOR	Q9NRC9	128 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	LENEP	Q9Y5L5	61 aa		5.9	□□□□□ -1.46
ITSN1-222	ENST00000462212	PGP	A6NDG6	321 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	CBY3	A6NI87	242 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	TAAR5	O14804	337 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	HMGB3	O15347	200 aa	Known RBP	5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	ARPC5	O15511	151 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	GPX1	P07203	203 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	DEFB130B	P0DP73	79 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	DEFB130A	P0DP74	79 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	BTN1A1	Q13410	526 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	ANXA2R	Q3ZCQ2	193 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	CCDC28A	Q8IWP9	274 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	C11orf72	Q8NBR9	251 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212		Q8TAT8	98 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	NOP10	Q9NPE3	64 aa	Known RBP	5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	CYTL1	Q9NRR1	136 aa		5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	EPPK1	P58107	5090 aa	Known RBP	5.89	□□□□□ -1.47
ITSN1-222	ENST00000462212	HMSD	A8MTL9	139 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	SMLR1	H3BR10	107 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212		P0DMU3	169 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	FAM231A	P0DMU4	169 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	FAM231C	P0DMU5	169 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	S100A1	P23297	94 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	GCHFR	P30047	84 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	RNASE4	P34096	147 aa	Known RBP	5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	DAZ2	Q13117	558 aa	Known RBP	5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	ZNF345	Q14585	488 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	ZNF726P1	Q15940	193 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	FAM74A1	Q5RGS3	127 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	TMEM88	Q6PEY1	159 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	SSX7	Q7RTT5	188 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	EIF4E3	Q8N5X7	224 aa	Known RBP	5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	ZNF680	Q8NEM1	530 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	CMTM2	Q8TAZ6	248 aa		5.88	□□□□□ -1.47
ITSN1-222	ENST00000462212	ST6GAL2	Q96JF0	529 aa		5.88	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms