RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 A0A1W2PRE2 83 aa10.89□□□□□ -0.67
COL16A1-206ENST00000461217 H3BMM0 161 aa10.89□□□□□ -0.67
COL16A1-206ENST00000461217 PAGE4O60829 102 aa10.89□□□□□ -0.67
COL16A1-206ENST00000461217 IGLC2P0DOY2 106 aa10.89□□□□□ -0.67
COL16A1-206ENST00000461217 PDE6HQ13956 83 aa10.89□□□□□ -0.67
COL16A1-206ENST00000461217 ZNF506Q5JVG8 444 aa10.89□□□□□ -0.67
COL16A1-206ENST00000461217 CST9LP1Q5W188 147 aa10.89□□□□□ -0.67
COL16A1-206ENST00000461217 EIF4E3Q8N5X7 224 aaKnown RBP10.89□□□□□ -0.67
COL16A1-206ENST00000461217 MRPS12O15235 138 aaKnown RBP10.88□□□□□ -0.67
COL16A1-206ENST00000461217 ZNF253O75346 499 aa10.88□□□□□ -0.67
COL16A1-206ENST00000461217 NDUFS6O75380 124 aaKnown RBP10.88□□□□□ -0.67
COL16A1-206ENST00000461217 IGKV3-20P01619 116 aa10.88□□□□□ -0.67
COL16A1-206ENST00000461217 UBE2G2P60604 165 aa10.88□□□□□ -0.67
COL16A1-206ENST00000461217 C12orf74Q32Q52 190 aa10.88□□□□□ -0.67
COL16A1-206ENST00000461217 SAMD13Q5VXD3 122 aa10.88□□□□□ -0.67
COL16A1-206ENST00000461217 LYPD1Q8N2G4 141 aa10.88□□□□□ -0.67
COL16A1-206ENST00000461217 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
COL16A1-206ENST00000461217 LINC00052Q96N35 136 aa10.88□□□□□ -0.67
COL16A1-206ENST00000461217 TREM1Q9NP99 234 aa10.88□□□□□ -0.67
COL16A1-206ENST00000461217 AGRNO00468 2067 aa10.88□□□□□ -0.67
COL16A1-206ENST00000461217 FRAS1Q86XX4 4008 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 TRBV19A0A075B6N1 114 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 IGHV3OR16-12A0A075B7B8 117 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 FAM74A7A6NL05 159 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 H3BQ15 152 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 AMBPP02760 352 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 HLA-DRB4P13762 266 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 ID1P41134 155 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 EMP1P54849 157 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 PSG9Q00887 426 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 MEF2BQ02080 365 aaPredicted RBP10.87□□□□□ -0.67
COL16A1-206ENST00000461217 TCEAL7Q9BRU2 100 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 NDUFAF3Q9BU61 184 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 KRTAP17-1Q9BYP8 105 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 AAMDCQ9H7C9 122 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 ZNF586Q9NXT0 402 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 HLA-DRB4X5D2U9 266 aa10.87□□□□□ -0.67
COL16A1-206ENST00000461217 KMT2AQ03164 3969 aa10.86□□□□□ -0.67
COL16A1-206ENST00000461217 F6UZH7 168 aa10.86□□□□□ -0.67
COL16A1-206ENST00000461217 PDE6DO43924 150 aa10.86□□□□□ -0.67
COL16A1-206ENST00000461217 FXYD7P58549 80 aa10.86□□□□□ -0.67
COL16A1-206ENST00000461217 ICAM4Q14773 271 aa10.86□□□□□ -0.67
COL16A1-206ENST00000461217 RXFP4Q8TDU9 374 aa10.86□□□□□ -0.67
COL16A1-206ENST00000461217 SLC50A1Q9BRV3 221 aa10.86□□□□□ -0.67
COL16A1-206ENST00000461217 OTORQ9NRC9 128 aa10.86□□□□□ -0.67
COL16A1-206ENST00000461217 YTHDF2Q9Y5A9 579 aaKnown RBP10.86□□□□□ -0.67
COL16A1-206ENST00000461217 P0DMU3 169 aa10.85□□□□□ -0.67
COL16A1-206ENST00000461217 FAM231AP0DMU4 169 aa10.85□□□□□ -0.67
COL16A1-206ENST00000461217 FAM231CP0DMU5 169 aa10.85□□□□□ -0.67
COL16A1-206ENST00000461217 DEFB1P60022 68 aa10.85□□□□□ -0.67
COL16A1-206ENST00000461217 RANP62826 216 aaKnown RBP10.85□□□□□ -0.67
COL16A1-206ENST00000461217 GDF5OSQ5U4N7 250 aa10.85□□□□□ -0.67
COL16A1-206ENST00000461217 SLC7A5P1Q8MH63 180 aa10.85□□□□□ -0.67
COL16A1-206ENST00000461217 OR4B1Q8NGF8 309 aa10.85□□□□□ -0.67
COL16A1-206ENST00000461217 TMEM189A5PLL7 270 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 H3BTX0 84 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 SPART-AS1P0CW21 52 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 SUMO1P63165 101 aaKnown RBP10.84□□□□□ -0.67
COL16A1-206ENST00000461217 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 FOXI2Q6ZQN5 318 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 LINC00336Q6ZUF6 198 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 POM121L12Q8N7R1 296 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 CMTM2Q8TAZ6 248 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 SLC35B3Q9H1N7 401 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 Q9H3A6 140 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 SAV1Q9H4B6 383 aaPredicted RBP10.84□□□□□ -0.67
COL16A1-206ENST00000461217 PRELID1Q9Y255 219 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 DNAH10Q8IVF4 4471 aa10.84□□□□□ -0.67
COL16A1-206ENST00000461217 PGPA6NDG6 321 aa10.83□□□□□ -0.68
COL16A1-206ENST00000461217 SMIM9A6NGZ8 99 aa10.83□□□□□ -0.68
COL16A1-206ENST00000461217 GGTLC3B5MD39 225 aa10.83□□□□□ -0.68
COL16A1-206ENST00000461217 TMEM250H0YL14 139 aa10.83□□□□□ -0.68
COL16A1-206ENST00000461217 NDUFB4O95168 129 aa10.83□□□□□ -0.68
COL16A1-206ENST00000461217 SNRPCP09234 159 aaKnown RBP10.83□□□□□ -0.68
COL16A1-206ENST00000461217 CSN1S1P47710 185 aa10.83□□□□□ -0.68
COL16A1-206ENST00000461217 ATP5G3P48201 142 aa10.83□□□□□ -0.68
COL16A1-206ENST00000461217 EBLN2Q6P2I7 272 aa10.83□□□□□ -0.68
COL16A1-206ENST00000461217 ZNF705AQ6ZN79 300 aaPredicted RBP10.83□□□□□ -0.68
COL16A1-206ENST00000461217 C5orf17Q8NAS9 161 aa10.83□□□□□ -0.68
COL16A1-206ENST00000461217 NEU1Q99519 415 aa10.83□□□□□ -0.68
COL16A1-206ENST00000461217 ZNF705FA8MVS1 300 aaPredicted RBP10.82□□□□□ -0.68
COL16A1-206ENST00000461217 M0R2N4 97 aa10.82□□□□□ -0.68
COL16A1-206ENST00000461217 SLC25A5P05141 298 aaKnown RBP10.82□□□□□ -0.68
COL16A1-206ENST00000461217 ZNF705DP0CH99 300 aaPredicted RBP10.82□□□□□ -0.68
COL16A1-206ENST00000461217 ZNF705BP0CI00 300 aaPredicted RBP10.82□□□□□ -0.68
COL16A1-206ENST00000461217 SRSF3P84103 164 aaKnown RBP10.82□□□□□ -0.68
COL16A1-206ENST00000461217 UBE2DNLQ8IWF7 75 aa10.82□□□□□ -0.68
COL16A1-206ENST00000461217 ARL6IP6Q8N6S5 226 aa10.82□□□□□ -0.68
COL16A1-206ENST00000461217 HIST1H2BAQ96A08 127 aa10.82□□□□□ -0.68
COL16A1-206ENST00000461217 RPUSD4Q96CM3 377 aaKnown RBP10.82□□□□□ -0.68
COL16A1-206ENST00000461217 C16orf92Q96LL3 132 aa10.82□□□□□ -0.68
COL16A1-206ENST00000461217 C17orf77Q96MU5 243 aa10.82□□□□□ -0.68
COL16A1-206ENST00000461217 ZNF331Q9NQX6 463 aaPredicted RBP10.82□□□□□ -0.68
COL16A1-206ENST00000461217 VPS13DQ5THJ4 4388 aa10.82□□□□□ -0.68
COL16A1-206ENST00000461217 SLC17A3O00476 420 aa10.81□□□□□ -0.68
COL16A1-206ENST00000461217 ISLRO14498 428 aa10.81□□□□□ -0.68
COL16A1-206ENST00000461217 SRP19P09132 144 aaKnown RBP10.81□□□□□ -0.68
COL16A1-206ENST00000461217 HTN3P15516 51 aa10.81□□□□□ -0.68
COL16A1-206ENST00000461217 CCDC28AQ8IWP9 274 aa10.81□□□□□ -0.68
COL16A1-206ENST00000461217 C11orf52Q96A22 123 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms