RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 C9orf47Q6ZRZ4 202 aa13.06□□□□□ -0.32
COL9A2-205ENST00000461118 FAM19A4Q96LR4 140 aa13.06□□□□□ -0.32
COL9A2-205ENST00000461118 AGPAT4-IT1Q9H0P7 198 aa13.06□□□□□ -0.32
COL9A2-205ENST00000461118 PLA2G2EQ9NZK7 142 aa13.06□□□□□ -0.32
COL9A2-205ENST00000461118 ERCC8Q13216 396 aa13.05□□□□□ -0.32
COL9A2-205ENST00000461118 LINC00336Q6ZUF6 198 aa13.05□□□□□ -0.32
COL9A2-205ENST00000461118 OR2G3Q8NGZ4 309 aa13.05□□□□□ -0.32
COL9A2-205ENST00000461118 PHYHIPLQ96FC7 376 aa13.05□□□□□ -0.32
COL9A2-205ENST00000461118 SLC25A5P05141 298 aaKnown RBP13.04□□□□□ -0.32
COL9A2-205ENST00000461118 UBE2L3P68036 154 aaKnown RBP13.04□□□□□ -0.32
COL9A2-205ENST00000461118 FAM122CQ6P4D5 195 aa13.04□□□□□ -0.32
COL9A2-205ENST00000461118 INO80EQ8NBZ0 244 aaPredicted RBP13.04□□□□□ -0.32
COL9A2-205ENST00000461118 OR2T35Q8NGX2 323 aa13.04□□□□□ -0.32
COL9A2-205ENST00000461118 C16orf74Q96GX8 76 aa13.04□□□□□ -0.32
COL9A2-205ENST00000461118 FAM210BQ96KR6 192 aa13.04□□□□□ -0.32
COL9A2-205ENST00000461118 PSMG3Q9BT73 122 aaPredicted RBP13.04□□□□□ -0.32
COL9A2-205ENST00000461118 TNFSF18Q9UNG2 199 aa13.04□□□□□ -0.32
COL9A2-205ENST00000461118 A0A1W2PPV4 95 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 KLLNB2CW77 178 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 NMBP08949 121 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 MED14OSP0DP75 135 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 CRISP2P16562 243 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 RAB2AP61019 212 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 DAD1P61803 113 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 RANP62826 216 aaKnown RBP13.03□□□□□ -0.32
COL9A2-205ENST00000461118 PQLC2Q6ZP29 291 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 HSD17B11Q8NBQ5 300 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 OR10G4Q8NGN3 311 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 OR10G9Q8NGN4 311 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 OR10G7Q8NGN6 311 aa13.03□□□□□ -0.32
COL9A2-205ENST00000461118 RNASE8Q8TDE3 154 aaKnown RBP13.03□□□□□ -0.32
COL9A2-205ENST00000461118 TMEM263Q8WUH6 116 aaKnown RBP13.03□□□□□ -0.32
COL9A2-205ENST00000461118 RNF222A6NCQ9 220 aa13.02□□□□□ -0.33
COL9A2-205ENST00000461118 HTN1P15515 57 aa13.02□□□□□ -0.33
COL9A2-205ENST00000461118 SERF2P84101 59 aa13.02□□□□□ -0.33
COL9A2-205ENST00000461118 TMEM78Q5T7P6 136 aa13.02□□□□□ -0.33
COL9A2-205ENST00000461118 NDUFAF3Q9BU61 184 aa13.02□□□□□ -0.33
COL9A2-205ENST00000461118 Q9H3A6 140 aa13.02□□□□□ -0.33
COL9A2-205ENST00000461118 TIMM8BQ9Y5J9 83 aaPredicted RBP13.02□□□□□ -0.33
COL9A2-205ENST00000461118 IGKV2-40A0A087WW87 121 aaPredicted RBP13.01□□□□□ -0.33
COL9A2-205ENST00000461118 FXYD6-FXYD2A0A087WZ82 144 aa13.01□□□□□ -0.33
COL9A2-205ENST00000461118 TRAV12-3A0A0B4J271 114 aa13.01□□□□□ -0.33
COL9A2-205ENST00000461118 TRBV7-9A0A0J9YWB2 115 aa13.01□□□□□ -0.33
COL9A2-205ENST00000461118 RBAKDNA6NC62 111 aa13.01□□□□□ -0.33
COL9A2-205ENST00000461118 G3V3Q6 166 aa13.01□□□□□ -0.33
COL9A2-205ENST00000461118 IGKV2D-40P01614 121 aaPredicted RBP13.01□□□□□ -0.33
COL9A2-205ENST00000461118 ATP6V0CP27449 155 aa13.01□□□□□ -0.33
COL9A2-205ENST00000461118 CSN1S1P47710 185 aa13.01□□□□□ -0.33
COL9A2-205ENST00000461118 VGLL1Q99990 258 aa13.01□□□□□ -0.33
COL9A2-205ENST00000461118 PYGO2Q9BRQ0 406 aa13.01□□□□□ -0.33
COL9A2-205ENST00000461118 ZNF492Q9P255 531 aa13.01□□□□□ -0.33
COL9A2-205ENST00000461118 C7orf71A4D174 169 aa13□□□□□ -0.33
COL9A2-205ENST00000461118 J3KRW8 73 aa13□□□□□ -0.33
COL9A2-205ENST00000461118 RTL8CO15255 209 aa13□□□□□ -0.33
COL9A2-205ENST00000461118 ZNF324O75467 553 aaPredicted RBP13□□□□□ -0.33
COL9A2-205ENST00000461118 MBP02144 154 aa13□□□□□ -0.33
COL9A2-205ENST00000461118 CCDC28AQ8IWP9 274 aa13□□□□□ -0.33
COL9A2-205ENST00000461118 RXFP4Q8TDU9 374 aa13□□□□□ -0.33
COL9A2-205ENST00000461118 LINC00467Q9BRT7 94 aa13□□□□□ -0.33
COL9A2-205ENST00000461118 EIF3GO75821 320 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL9A2-205ENST00000461118 ZNF138P52744 262 aa12.99□□□□□ -0.33
COL9A2-205ENST00000461118 ZFAND2AQ8N6M9 145 aa12.99□□□□□ -0.33
COL9A2-205ENST00000461118 ARL6IP6Q8N6S5 226 aa12.99□□□□□ -0.33
COL9A2-205ENST00000461118 KRTAP4-5Q9BYR2 181 aa12.99□□□□□ -0.33
COL9A2-205ENST00000461118 OTORQ9NRC9 128 aa12.99□□□□□ -0.33
COL9A2-205ENST00000461118 BORCS7-ASMTA0A0B4J1R7 106 aa12.98□□□□□ -0.33
COL9A2-205ENST00000461118 CBY3A6NI87 242 aa12.98□□□□□ -0.33
COL9A2-205ENST00000461118 GPX1P07203 203 aa12.98□□□□□ -0.33
COL9A2-205ENST00000461118 STAG3L2P0CL84 134 aa12.98□□□□□ -0.33
COL9A2-205ENST00000461118 STAG3L3P0CL85 134 aa12.98□□□□□ -0.33
COL9A2-205ENST00000461118 DEFB130BP0DP73 79 aa12.98□□□□□ -0.33
COL9A2-205ENST00000461118 DEFB130AP0DP74 79 aa12.98□□□□□ -0.33
COL9A2-205ENST00000461118 CDC34P49427 236 aaPredicted RBP12.98□□□□□ -0.33
COL9A2-205ENST00000461118 CD300CQ08708 224 aa12.98□□□□□ -0.33
COL9A2-205ENST00000461118 RPL7L1Q6DKI1 246 aaKnown RBP12.98□□□□□ -0.33
COL9A2-205ENST00000461118 GNPNAT1Q96EK6 184 aaPredicted RBP12.98□□□□□ -0.33
COL9A2-205ENST00000461118 NOP10Q9NPE3 64 aaKnown RBP12.98□□□□□ -0.33
COL9A2-205ENST00000461118 DIRC3C9JPN6 131 aa12.97□□□□□ -0.33
COL9A2-205ENST00000461118 HTN3P15516 51 aa12.97□□□□□ -0.33
COL9A2-205ENST00000461118 RNASE4P34096 147 aaKnown RBP12.97□□□□□ -0.33
COL9A2-205ENST00000461118 BTN1A1Q13410 526 aa12.97□□□□□ -0.33
COL9A2-205ENST00000461118 FAM74A1Q5RGS3 127 aa12.97□□□□□ -0.33
COL9A2-205ENST00000461118 SUN5Q8TC36 379 aa12.97□□□□□ -0.33
COL9A2-205ENST00000461118 RAB24Q969Q5 203 aa12.97□□□□□ -0.33
COL9A2-205ENST00000461118 PGPA6NDG6 321 aa12.96□□□□□ -0.33
COL9A2-205ENST00000461118 TAAR5O14804 337 aa12.96□□□□□ -0.33
COL9A2-205ENST00000461118 HMGB3O15347 200 aaKnown RBP12.96□□□□□ -0.33
COL9A2-205ENST00000461118 ARL14EPLP0DKL9 152 aa12.96□□□□□ -0.33
COL9A2-205ENST00000461118 P0DMU3 169 aa12.96□□□□□ -0.33
COL9A2-205ENST00000461118 FAM231AP0DMU4 169 aa12.96□□□□□ -0.33
COL9A2-205ENST00000461118 FAM231CP0DMU5 169 aa12.96□□□□□ -0.33
COL9A2-205ENST00000461118 LINC00612Q8N6U2 182 aa12.96□□□□□ -0.33
COL9A2-205ENST00000461118 TMED6Q8WW62 240 aa12.96□□□□□ -0.33
COL9A2-205ENST00000461118 SH3BGRL3Q9H299 93 aa12.96□□□□□ -0.33
COL9A2-205ENST00000461118 LENEPQ9Y5L5 61 aa12.96□□□□□ -0.33
COL9A2-205ENST00000461118 PRSS29PA6NIE9 313 aa12.95□□□□□ -0.34
COL9A2-205ENST00000461118 ATP5G1P05496 136 aa12.95□□□□□ -0.34
COL9A2-205ENST00000461118 ATP5G3P48201 142 aa12.95□□□□□ -0.34
COL9A2-205ENST00000461118 DAZ2Q13117 558 aaKnown RBP12.95□□□□□ -0.34
COL9A2-205ENST00000461118 ANXA2RQ3ZCQ2 193 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms