RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TMEM256Q8N2U0 113 aa9.56□□□□□ -0.88
RAB11FIP3-207ENST00000461009 ARL6IP6Q8N6S5 226 aa9.56□□□□□ -0.88
RAB11FIP3-207ENST00000461009 Q8NAQ8 132 aa9.56□□□□□ -0.88
RAB11FIP3-207ENST00000461009 OTORQ9NRC9 128 aa9.56□□□□□ -0.88
RAB11FIP3-207ENST00000461009 SACSQ9NZJ4 4579 aa9.56□□□□□ -0.88
RAB11FIP3-207ENST00000461009 RBAKDNA6NC62 111 aa9.55□□□□□ -0.88
RAB11FIP3-207ENST00000461009 SLC25A5P05141 298 aaKnown RBP9.55□□□□□ -0.88
RAB11FIP3-207ENST00000461009 TPT1P13693 172 aaKnown RBP9.55□□□□□ -0.88
RAB11FIP3-207ENST00000461009 GCHFRP30047 84 aa9.55□□□□□ -0.88
RAB11FIP3-207ENST00000461009 ERCC8Q13216 396 aa9.55□□□□□ -0.88
RAB11FIP3-207ENST00000461009 RRN3P1Q2M238 152 aa9.55□□□□□ -0.88
RAB11FIP3-207ENST00000461009 LGALS9CQ6DKI2 356 aa9.55□□□□□ -0.88
RAB11FIP3-207ENST00000461009 C9orf47Q6ZRZ4 202 aa9.55□□□□□ -0.88
RAB11FIP3-207ENST00000461009 C1orf158Q8N1D5 194 aa9.55□□□□□ -0.88
RAB11FIP3-207ENST00000461009 C20orf144Q9BQM9 153 aa9.55□□□□□ -0.88
RAB11FIP3-207ENST00000461009 TRAV12-2A0A075B6T6 113 aa9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 UMAD1C9J7I0 102 aa9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 CRXO43186 299 aaPredicted RBP9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 RBMY1A1P0DJD3 496 aaKnown RBP9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 RBMY1CP0DJD4 496 aa9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 CT45A10P0DMU9 189 aa9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 RBMY1FQ15415 496 aaKnown RBP9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 LGALSLQ3ZCW2 172 aaPredicted RBP9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 EIF5AL1Q6IS14 154 aaKnown RBP9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 IQCF2Q8IXL9 164 aa9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 BAP18Q8IXM2 172 aa9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 STOML3Q8TAV4 291 aa9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 SUN5Q8TC36 379 aa9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 LINC01587Q99440 93 aa9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 AGPAT4-IT1Q9H0P7 198 aa9.54□□□□□ -0.88
RAB11FIP3-207ENST00000461009 IGKV2-40A0A087WW87 121 aaPredicted RBP9.53□□□□□ -0.88
RAB11FIP3-207ENST00000461009 DIRC3C9JPN6 131 aa9.53□□□□□ -0.88
RAB11FIP3-207ENST00000461009 IGKV2D-40P01614 121 aaPredicted RBP9.53□□□□□ -0.88
RAB11FIP3-207ENST00000461009 DPPA3Q6W0C5 159 aa9.53□□□□□ -0.88
RAB11FIP3-207ENST00000461009 TRAV10A0A0B4J240 114 aa9.52□□□□□ -0.89
RAB11FIP3-207ENST00000461009 TRBV7-9A0A0J9YWB2 115 aa9.52□□□□□ -0.89
RAB11FIP3-207ENST00000461009 TEX48A0A1B0GUV7 120 aa9.52□□□□□ -0.89
RAB11FIP3-207ENST00000461009 IGLL5B9A064 214 aa9.52□□□□□ -0.89
RAB11FIP3-207ENST00000461009 NMBP08949 121 aa9.52□□□□□ -0.89
RAB11FIP3-207ENST00000461009 ZNF138P52744 262 aa9.52□□□□□ -0.89
RAB11FIP3-207ENST00000461009 VGLL1Q99990 258 aa9.52□□□□□ -0.89
RAB11FIP3-207ENST00000461009 ZNF492Q9P255 531 aa9.52□□□□□ -0.89
RAB11FIP3-207ENST00000461009 DNAH1Q9P2D7 4330 aa9.52□□□□□ -0.89
RAB11FIP3-207ENST00000461009 LOC102723971A0A1B0GUV8 181 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 SERTM2A0A1B0GWG4 89 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 MAP1LC3B2A6NCE7 125 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 H7BYZ3 331 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 K7EQM0 130 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 GPX1P07203 203 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 SPART-AS1P0CW21 52 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 TAS2R60P59551 318 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 SUMO1P63165 101 aaKnown RBP9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 ZNF726P1Q15940 193 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 ZFP69Q49AA0 526 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 CCDC28AQ8IWP9 274 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 NIPSNAP3BQ9BS92 247 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 NKX6-2Q9C056 277 aaPredicted RBP9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 MAP1LC3BQ9GZQ8 125 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 RPH3ALQ9UNE2 315 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 LENEPQ9Y5L5 61 aa9.51□□□□□ -0.89
RAB11FIP3-207ENST00000461009 A0A1W2PRE2 83 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 ZNF705GA8MUZ8 300 aaPredicted RBP9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 J3KRW8 73 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 CRISP2P16562 243 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 RAB5CP51148 216 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 EMP1P54849 157 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 FGF8P55075 233 aaPredicted RBP9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 GFI1BQ5VTD9 330 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 GOLT1AQ6ZVE7 132 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 SSX7Q7RTT5 188 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 SLC51BQ86UW2 128 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 C5orf17Q8NAS9 161 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 FAM213BQ8TBF2 198 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 TMED6Q8WW62 240 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 FAM19A4Q96LR4 140 aa9.5□□□□□ -0.89
RAB11FIP3-207ENST00000461009 TRAV12-3A0A0B4J271 114 aa9.49□□□□□ -0.89
RAB11FIP3-207ENST00000461009 A0A1B0GVG6 124 aa9.49□□□□□ -0.89
RAB11FIP3-207ENST00000461009 C7orf71A4D174 169 aa9.49□□□□□ -0.89
RAB11FIP3-207ENST00000461009 KLLNB2CW77 178 aa9.49□□□□□ -0.89
RAB11FIP3-207ENST00000461009 HTN1P15515 57 aa9.49□□□□□ -0.89
RAB11FIP3-207ENST00000461009 RNASE4P34096 147 aaKnown RBP9.49□□□□□ -0.89
RAB11FIP3-207ENST00000461009 ZNF493Q6ZR52 646 aa9.49□□□□□ -0.89
RAB11FIP3-207ENST00000461009 SFT2D1Q8WV19 159 aa9.49□□□□□ -0.89
RAB11FIP3-207ENST00000461009 MBD3L1Q8WWY6 194 aa9.49□□□□□ -0.89
RAB11FIP3-207ENST00000461009 PYGO2Q9BRQ0 406 aa9.49□□□□□ -0.89
RAB11FIP3-207ENST00000461009 TMPRSS5Q9H3S3 457 aa9.49□□□□□ -0.89
RAB11FIP3-207ENST00000461009 IFNA7P01567 189 aa9.48□□□□□ -0.89
RAB11FIP3-207ENST00000461009 H2AFB1P0C5Y9 115 aa9.48□□□□□ -0.89
RAB11FIP3-207ENST00000461009 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
RAB11FIP3-207ENST00000461009 Q6ZTC4 211 aa9.48□□□□□ -0.89
RAB11FIP3-207ENST00000461009 EPDR1Q9UM22 224 aa9.48□□□□□ -0.89
RAB11FIP3-207ENST00000461009 ALMS1Q8TCU4 4167 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 DEFB131BA0A096LNP1 70 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 FBLL1A6NHQ2 334 aaKnown RBP9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 F6UZH7 168 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 TEX46H3BTG2 121 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 TCRAP04437 139 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 FHITP49789 147 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 PPT1P50897 306 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 UBE2G2P60604 165 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 311.7 ms