RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
HDLBP-229ENST00000460826 IGF2BP2-AS1Q96M15 143 aa10.14□□□□□ -0.79
HDLBP-229ENST00000460826 IGHV3OR16-12A0A075B7B8 117 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 A0A0J9YWU9 116 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 A0A1W2PRE2 83 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 AMBPP02760 352 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 SLC25A5P05141 298 aaKnown RBP10.13□□□□□ -0.79
HDLBP-229ENST00000460826 H2AFB1P0C5Y9 115 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 SUMO1P63165 101 aaKnown RBP10.13□□□□□ -0.79
HDLBP-229ENST00000460826 GOLT1AQ6ZVE7 132 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 Q8TAT8 98 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 CMTM2Q8TAZ6 248 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 RXFP4Q8TDU9 374 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 FAM19A4Q96LR4 140 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 LINC00477Q96M19 166 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 ODF3Q96PU9 254 aa10.13□□□□□ -0.79
HDLBP-229ENST00000460826 RBAKDNA6NC62 111 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 FAM74A7A6NL05 159 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 J3KRW8 73 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 DEFB4AO15263 64 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 INSP01308 110 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 CDKN1BP46527 198 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 RAB5CP51148 216 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 TMEM78Q5T7P6 136 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 GFI1BQ5VTD9 330 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 ALKAL2Q6UX46 152 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 Q8NAQ8 132 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 C5orf17Q8NAS9 161 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 WWC2-AS2Q96NR7 200 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 ZNF492Q9P255 531 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 CSMD3Q7Z407 3707 aa10.12□□□□□ -0.79
HDLBP-229ENST00000460826 TRAV8-1A0A0A6YYK1 113 aa10.11□□□□□ -0.79
HDLBP-229ENST00000460826 IGHV4-28A0A0C4DH34 117 aa10.11□□□□□ -0.79
HDLBP-229ENST00000460826 PRM2P04554 102 aa10.11□□□□□ -0.79
HDLBP-229ENST00000460826 TSPOP30536 169 aa10.11□□□□□ -0.79
HDLBP-229ENST00000460826 LEPP41159 167 aa10.11□□□□□ -0.79
HDLBP-229ENST00000460826 ZNF138P52744 262 aa10.11□□□□□ -0.79
HDLBP-229ENST00000460826 CCL20P78556 96 aa10.11□□□□□ -0.79
HDLBP-229ENST00000460826 ARL6IP6Q8N6S5 226 aa10.11□□□□□ -0.79
HDLBP-229ENST00000460826 GOLT1BQ9Y3E0 138 aa10.11□□□□□ -0.79
HDLBP-229ENST00000460826 STARD9Q9P2P6 4700 aa10.11□□□□□ -0.79
HDLBP-229ENST00000460826 TCRAP04437 139 aa10.1□□□□□ -0.79
HDLBP-229ENST00000460826 CRISP2P16562 243 aa10.1□□□□□ -0.79
HDLBP-229ENST00000460826 PRR9Q5T870 116 aa10.1□□□□□ -0.79
HDLBP-229ENST00000460826 ZFAND2AQ8N6M9 145 aa10.1□□□□□ -0.79
HDLBP-229ENST00000460826 SGK494Q96LW2 274 aa10.1□□□□□ -0.79
HDLBP-229ENST00000460826 NEU1Q99519 415 aa10.1□□□□□ -0.79
HDLBP-229ENST00000460826 EPDR1Q9UM22 224 aa10.1□□□□□ -0.79
HDLBP-229ENST00000460826 TRAV1-1A0A0B4J248 108 aa10.09□□□□□ -0.79
HDLBP-229ENST00000460826 KLLNB2CW77 178 aa10.09□□□□□ -0.79
HDLBP-229ENST00000460826 PAGE4O60829 102 aa10.09□□□□□ -0.79
HDLBP-229ENST00000460826 MIFP14174 115 aa10.09□□□□□ -0.79
HDLBP-229ENST00000460826 ATP5G3P48201 142 aa10.09□□□□□ -0.79
HDLBP-229ENST00000460826 BTN1A1Q13410 526 aa10.09□□□□□ -0.79
HDLBP-229ENST00000460826 TMEM208Q9BTX3 173 aa10.09□□□□□ -0.79
HDLBP-229ENST00000460826 C11orf68Q9H3H3 251 aaKnown RBP10.09□□□□□ -0.79
HDLBP-229ENST00000460826 DYNC2H1Q8NCM8 4307 aaKnown RBP10.09□□□□□ -0.79
HDLBP-229ENST00000460826 TRAV12-3A0A0B4J271 114 aa10.08□□□□□ -0.8
HDLBP-229ENST00000460826 ZNF705GA8MUZ8 300 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-229ENST00000460826 Q6ZQT7 251 aa10.08□□□□□ -0.8
HDLBP-229ENST00000460826 CCDC28AQ8IWP9 274 aa10.08□□□□□ -0.8
HDLBP-229ENST00000460826 TVP23CQ96ET8 276 aa10.08□□□□□ -0.8
HDLBP-229ENST00000460826 C7orf71A4D174 169 aa10.07□□□□□ -0.8
HDLBP-229ENST00000460826 PEX7O00628 323 aa10.07□□□□□ -0.8
HDLBP-229ENST00000460826 IFNA7P01567 189 aa10.07□□□□□ -0.8
HDLBP-229ENST00000460826 IGLV2-11P01706 119 aa10.07□□□□□ -0.8
HDLBP-229ENST00000460826 RNASE4P34096 147 aaKnown RBP10.07□□□□□ -0.8
HDLBP-229ENST00000460826 CST9LP1Q5W188 147 aa10.07□□□□□ -0.8
HDLBP-229ENST00000460826 CYB561D1Q8N8Q1 229 aa10.07□□□□□ -0.8
HDLBP-229ENST00000460826 LINC00479Q96M42 142 aa10.07□□□□□ -0.8
HDLBP-229ENST00000460826 LINC01587Q99440 93 aa10.07□□□□□ -0.8
HDLBP-229ENST00000460826 ATG101Q9BSB4 218 aa10.07□□□□□ -0.8
HDLBP-229ENST00000460826 NKX6-2Q9C056 277 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-229ENST00000460826 ARL2-SNX15V9GYD0 113 aa10.07□□□□□ -0.8
HDLBP-229ENST00000460826 TRAV34A0A0B4J273 112 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 TRBV7-9A0A0J9YWB2 115 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 SERTM2A0A1B0GWG4 89 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 SMIM9A6NGZ8 99 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 ZNF324O75467 553 aaPredicted RBP10.06□□□□□ -0.8
HDLBP-229ENST00000460826 HBE1P02100 147 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 GPX1P07203 203 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 NMBP08949 121 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 AZU1P20160 251 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 TMEM256Q8N2U0 113 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 C20orf144Q9BQM9 153 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 GNG13Q9P2W3 67 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 PSG8Q9UQ74 426 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 LENEPQ9Y5L5 61 aa10.06□□□□□ -0.8
HDLBP-229ENST00000460826 TENM2Q9NT68 2774 aa10.05□□□□□ -0.8
HDLBP-229ENST00000460826 LOC102723971A0A1B0GUV8 181 aa10.05□□□□□ -0.8
HDLBP-229ENST00000460826 FLI1Q01543 452 aaPredicted RBP10.05□□□□□ -0.8
HDLBP-229ENST00000460826 RRN3P1Q2M238 152 aa10.05□□□□□ -0.8
HDLBP-229ENST00000460826 TMEM75Q8N9X5 138 aa10.05□□□□□ -0.8
HDLBP-229ENST00000460826 MUC7Q8TAX7 377 aa10.05□□□□□ -0.8
HDLBP-229ENST00000460826 CELA1Q9UNI1 258 aa10.05□□□□□ -0.8
HDLBP-229ENST00000460826 PLECQ15149 4684 aaKnown RBP10.04□□□□□ -0.8
HDLBP-229ENST00000460826 F6UZH7 168 aa10.04□□□□□ -0.8
HDLBP-229ENST00000460826 H7BYZ3 331 aa10.04□□□□□ -0.8
HDLBP-229ENST00000460826 K7EQM0 130 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms