RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 PLXNA3P51805 1871 aa1.78□□□□□ -2.12
CCDC58-202ENST00000460810 COL24A1Q17RW2 1714 aa1.78□□□□□ -2.12
CCDC58-202ENST00000460810 ROCK2O75116 1388 aaKnown RBP1.78□□□□□ -2.12
CCDC58-202ENST00000460810 M0R129 80 aa1.78□□□□□ -2.12
CCDC58-202ENST00000460810 NPFFO15130 113 aa1.78□□□□□ -2.12
CCDC58-202ENST00000460810 GNG7O60262 68 aa1.78□□□□□ -2.12
CCDC58-202ENST00000460810 APOC1P02654 83 aa1.78□□□□□ -2.12
CCDC58-202ENST00000460810 RRAS2P62070 204 aaPredicted RBP1.78□□□□□ -2.12
CCDC58-202ENST00000460810 CNBPP62633 177 aaKnown RBP1.78□□□□□ -2.12
CCDC58-202ENST00000460810 NEDD8Q15843 81 aa1.78□□□□□ -2.12
CCDC58-202ENST00000460810 OR5AK2Q8NH90 309 aa1.78□□□□□ -2.12
CCDC58-202ENST00000460810 TMEM106BQ9NUM4 274 aa1.78□□□□□ -2.12
CCDC58-202ENST00000460810 SOX21Q9Y651 276 aaPredicted RBP1.78□□□□□ -2.12
CCDC58-202ENST00000460810 MYO9BQ13459 2157 aa1.78□□□□□ -2.13
CCDC58-202ENST00000460810 VWDEQ8N2E2 1590 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 TNS3Q68CZ2 1445 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 IBTKQ9P2D0 1353 aaPredicted RBP1.77□□□□□ -2.13
CCDC58-202ENST00000460810 TRBV6-8A0A0A6YYG3 113 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 TRBV6-5A0A0K0K1A5 114 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 ZNF670-ZNF695F2Z2N8 137 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 TPST1O60507 370 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 CXCL8P10145 99 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 HIST1H1BP16401 226 aaKnown RBP1.77□□□□□ -2.13
CCDC58-202ENST00000460810 PCBD1P61457 104 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 COPZ1P61923 177 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 GLIPR1L1Q6UWM5 242 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 C2orf82Q6UX34 121 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 ZCCHC23Q6ZST2 131 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 C15orf53Q8NAA6 179 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 OTOSQ8NHW6 89 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 LINC00470Q9BZP3 86 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 METTL1Q9UBP6 276 aaKnown RBP1.77□□□□□ -2.13
CCDC58-202ENST00000460810 MICAL3Q7RTP6 2002 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 ANAPC1Q9H1A4 1944 aa1.77□□□□□ -2.13
CCDC58-202ENST00000460810 ZNF518AQ6AHZ1 1483 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 RGS12O14924 1447 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 KDM6AO15550 1401 aaPredicted RBP1.76□□□□□ -2.13
CCDC58-202ENST00000460810 COL11A1P12107 1806 aaPredicted RBP1.76□□□□□ -2.13
CCDC58-202ENST00000460810 LOC107984156A0A0G2JMH3 177 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 C3orf85A0A1B0GTC6 90 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 A6NN06 94 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 NCR2O95944 276 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 LSM3P62310 102 aaKnown RBP1.76□□□□□ -2.13
CCDC58-202ENST00000460810 DEFB103AP81534 67 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 CLLU1Q5K131 121 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 FOXI2Q6ZQN5 318 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 ARL17AQ8IVW1 177 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 OR5AS1Q8N127 324 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 OR10AC1Q8NH08 325 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 ARL11Q969Q4 196 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 ZNF625Q96I27 306 aaPredicted RBP1.76□□□□□ -2.13
CCDC58-202ENST00000460810 REG4Q9BYZ8 158 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 LSM2Q9Y333 95 aaKnown RBP1.76□□□□□ -2.13
CCDC58-202ENST00000460810 USP54Q70EL1 1684 aa1.76□□□□□ -2.13
CCDC58-202ENST00000460810 POLEQ07864 2286 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 COL5A3P25940 1745 aaPredicted RBP1.75□□□□□ -2.13
CCDC58-202ENST00000460810 ZNF736B4DX44 427 aaPredicted RBP1.75□□□□□ -2.13
CCDC58-202ENST00000460810 DLEU1O43261 78 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 CKS2P33552 79 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 MIR22HGQ0VDD5 57 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 KRTAP6-3Q3LI67 103 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 TEX261Q6UWH6 196 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 RPS19BP1Q86WX3 136 aaKnown RBP1.75□□□□□ -2.13
CCDC58-202ENST00000460810 GKN2Q86XP6 184 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 Q8N2B8 174 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 C10orf111Q8N326 155 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 C2orf88Q9BSF0 95 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 SLC35B3Q9H1N7 401 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 LAMB4A4D0S4 1761 aa1.75□□□□□ -2.13
CCDC58-202ENST00000460810 PTPRGP23470 1445 aa1.74□□□□□ -2.13
CCDC58-202ENST00000460810 SMG6Q86US8 1419 aaKnown RBP1.74□□□□□ -2.13
CCDC58-202ENST00000460810 RIMS1Q86UR5 1692 aaKnown RBP1.74□□□□□ -2.13
CCDC58-202ENST00000460810 CDK5RAP2Q96SN8 1893 aa1.74□□□□□ -2.13
CCDC58-202ENST00000460810 F8W036 122 aa1.74□□□□□ -2.13
CCDC58-202ENST00000460810 ETV6P41212 452 aa1.74□□□□□ -2.13
CCDC58-202ENST00000460810 SELENOWP63302 87 aa1.74□□□□□ -2.13
CCDC58-202ENST00000460810 PATE1Q8WXA2 126 aa1.74□□□□□ -2.13
CCDC58-202ENST00000460810 TMEM203Q969S6 136 aa1.74□□□□□ -2.13
CCDC58-202ENST00000460810 LINC00052Q96N35 136 aa1.74□□□□□ -2.13
CCDC58-202ENST00000460810 MPC1Q9Y5U8 109 aa1.74□□□□□ -2.13
CCDC58-202ENST00000460810 FGD6Q6ZV73 1430 aa1.74□□□□□ -2.13
CCDC58-202ENST00000460810 MYLKQ15746 1914 aa1.74□□□□□ -2.13
CCDC58-202ENST00000460810 WDR97A6NE52 1622 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 FAM135AQ9P2D6 1515 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 IGHV1-24A0A0C4DH33 117 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 CCL16O15467 120 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 HYPMO75409 117 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 IGF2P01344 180 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 EMX2Q04743 252 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 ASB16-AS1Q495Z4 193 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 PCOTHQ58A44 107 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 CASC2Q6XLA1 102 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 ZCCHC13Q8WW36 166 aaKnown RBP1.73□□□□□ -2.13
CCDC58-202ENST00000460810 CIB3Q96Q77 187 aaPredicted RBP1.73□□□□□ -2.13
CCDC58-202ENST00000460810 SDF2Q99470 211 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 PHLPP1O60346 1717 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 MRC2Q9UBG0 1479 aa1.73□□□□□ -2.13
CCDC58-202ENST00000460810 HEATR5BQ9P2D3 2071 aa1.72□□□□□ -2.13
CCDC58-202ENST00000460810 GRIN2AQ12879 1464 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms