RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 FAM74A7A6NL05 159 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 OR11H12B2RN74 326 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 H3BMM0 161 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 OR7C2O60412 319 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 SLC25A5P05141 298 aaKnown RBP4.13□□□□□ -1.75
PTPN12-209ENST00000460731 GIG44P09565 113 aaPredicted RBP4.13□□□□□ -1.75
PTPN12-209ENST00000460731 OR10J4P0C629 311 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 RBMY1DP0C7P1 496 aaKnown RBP4.13□□□□□ -1.75
PTPN12-209ENST00000460731 HLA-DRB4P13762 266 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 DEFB131AP59861 70 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 CCL20P78556 96 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 AMTNQ6UX39 209 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 ALKAL2Q6UX46 152 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 C9orf47Q6ZRZ4 202 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 TRPT1Q86TN4 253 aaKnown RBP4.13□□□□□ -1.75
PTPN12-209ENST00000460731 GTSCR1Q86UQ5 136 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 KIR2DL5AQ8N109 375 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 KIR2DL5BQ8NHK3 375 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 FAM213BQ8TBF2 198 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 RXFP4Q8TDU9 374 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 SFT2D1Q8WV19 159 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 FAM19A4Q96LR4 140 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 PRR25Q96S07 402 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 TXNDC17Q9BRA2 123 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 TCEAL7Q9BRU2 100 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 MAP1LC3BQ9GZQ8 125 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 SAV1Q9H4B6 383 aaPredicted RBP4.13□□□□□ -1.75
PTPN12-209ENST00000460731 KLF12Q9Y4X4 402 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 SELENOKQ9Y6D0 94 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 HLA-DRB4X5D2U9 266 aa4.13□□□□□ -1.75
PTPN12-209ENST00000460731 SERTM2A0A1B0GWG4 89 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 ZNF705EA8MWA4 302 aaPredicted RBP4.12□□□□□ -1.75
PTPN12-209ENST00000460731 GGTLC3B5MD39 225 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 HMGB3O15347 200 aaKnown RBP4.12□□□□□ -1.75
PTPN12-209ENST00000460731 EIF3GO75821 320 aaKnown RBP eCLIP4.12□□□□□ -1.75
PTPN12-209ENST00000460731 IFNA7P01567 189 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 IGLV2-11P01706 119 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 HBE1P02100 147 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 NMBP08949 121 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 ZNF688P0C7X2 276 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 IGHV4-30-4P0DP06 118 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 HLA-DMBP28068 263 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 PPT1P50897 306 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 CD81P60033 236 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 RANP62826 216 aaKnown RBP4.12□□□□□ -1.75
PTPN12-209ENST00000460731 UBE2L3P68036 154 aaKnown RBP4.12□□□□□ -1.75
PTPN12-209ENST00000460731 PSMG4Q5JS54 123 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 FAM74A1Q5RGS3 127 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 COX8CQ7Z4L0 72 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 APRG1Q8IVJ8 170 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 DEFB125Q8N687 156 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 OR8A1Q8NGG7 326 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 RPL36ALQ969Q0 106 aaKnown RBP4.12□□□□□ -1.75
PTPN12-209ENST00000460731 RPUSD4Q96CM3 377 aaKnown RBP4.12□□□□□ -1.75
PTPN12-209ENST00000460731 ODF3Q96PU9 254 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 Q9H3A6 140 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 YTHDF2Q9Y5A9 579 aaKnown RBP4.12□□□□□ -1.75
PTPN12-209ENST00000460731 DNAH9Q9NYC9 4486 aa4.12□□□□□ -1.75
PTPN12-209ENST00000460731 IGKV3-7A0A075B6H7 116 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 TRBV6-1A0A0K0K1D8 114 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 PGPA6NDG6 321 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 FBLL1A6NHQ2 334 aaKnown RBP4.11□□□□□ -1.75
PTPN12-209ENST00000460731 ZNF705FA8MVS1 300 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-209ENST00000460731 PRAC2D3DTV9 90 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 H3BTX0 84 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 M0R3E3 92 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 UBE2CO00762 179 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 CRISP2P16562 243 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 TAGLN2P37802 199 aaKnown RBP4.11□□□□□ -1.75
PTPN12-209ENST00000460731 TFPI2P48307 235 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 FGF8P55075 233 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-209ENST00000460731 C21orf62-AS1Q17RA5 79 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 GDF5OSQ5U4N7 250 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 Q6ZWC4 215 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 ZNF767PQ75MW2 155 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 EXOC3-AS1Q8N2X6 119 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 RNF182Q8N6D2 247 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 C5orf17Q8NAS9 161 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 CSNK1G2-AS1Q8NCQ2 148 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 BLNKQ8WV28 456 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 HIST1H2BAQ96A08 127 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 C11orf52Q96A22 123 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 LINC00477Q96M19 166 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 AGPAT4-IT1Q9H0P7 198 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 AAMDCQ9H7C9 122 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 EPDR1Q9UM22 224 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 LENEPQ9Y5L5 61 aa4.11□□□□□ -1.75
PTPN12-209ENST00000460731 KNCNA6PVL3 124 aa4.1□□□□□ -1.75
PTPN12-209ENST00000460731 KLLNB2CW77 178 aa4.1□□□□□ -1.75
PTPN12-209ENST00000460731 F6UB75 175 aa4.1□□□□□ -1.75
PTPN12-209ENST00000460731 TEX46H3BTG2 121 aa4.1□□□□□ -1.75
PTPN12-209ENST00000460731 CRXO43186 299 aaPredicted RBP4.1□□□□□ -1.75
PTPN12-209ENST00000460731 PAGE4O60829 102 aa4.1□□□□□ -1.75
PTPN12-209ENST00000460731 DUSP14O95147 198 aaKnown RBP4.1□□□□□ -1.75
PTPN12-209ENST00000460731 TCRAP04437 139 aa4.1□□□□□ -1.75
PTPN12-209ENST00000460731 SNRPCP09234 159 aaKnown RBP4.1□□□□□ -1.75
PTPN12-209ENST00000460731 FRMD6-AS1P0C7T7 363 aa4.1□□□□□ -1.75
PTPN12-209ENST00000460731 CT45A10P0DMU9 189 aa4.1□□□□□ -1.75
PTPN12-209ENST00000460731 CNN1P51911 297 aaKnown RBP4.1□□□□□ -1.75
PTPN12-209ENST00000460731 DEFB1P60022 68 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms