RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TAS2R60P59551 318 aa9.13□□□□□ -0.95
HDAC4-206ENST00000460235 FLI1Q01543 452 aaPredicted RBP9.13□□□□□ -0.95
HDAC4-206ENST00000460235 TOR2AQ5JU69 321 aa9.13□□□□□ -0.95
HDAC4-206ENST00000460235 C11orf52Q96A22 123 aa9.13□□□□□ -0.95
HDAC4-206ENST00000460235 VWFP04275 2813 aa9.13□□□□□ -0.95
HDAC4-206ENST00000460235 IGKV2-40A0A087WW87 121 aaPredicted RBP9.12□□□□□ -0.95
HDAC4-206ENST00000460235 TRBV6-1A0A0K0K1D8 114 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 A8MTW9 85 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 IGKV2D-40P01614 121 aaPredicted RBP9.12□□□□□ -0.95
HDAC4-206ENST00000460235 CDKN1BP46527 198 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 TMEM183BQ1AE95 376 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 FAM74A3Q4VXF1 159 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 UQCC3Q6UW78 93 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 MRAPQ8TCY5 172 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 SMIM12Q96EX1 92 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 C20orf144Q9BQM9 153 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 AGPAT4-IT1Q9H0P7 198 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 ZNF492Q9P255 531 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 KLF12Q9Y4X4 402 aa9.12□□□□□ -0.95
HDAC4-206ENST00000460235 PRAC2D3DTV9 90 aa9.11□□□□□ -0.95
HDAC4-206ENST00000460235 F6UB75 175 aa9.11□□□□□ -0.95
HDAC4-206ENST00000460235 IGKV3-20P01619 116 aa9.11□□□□□ -0.95
HDAC4-206ENST00000460235 GPX1P07203 203 aa9.11□□□□□ -0.95
HDAC4-206ENST00000460235 CT45A10P0DMU9 189 aa9.11□□□□□ -0.95
HDAC4-206ENST00000460235 RPL35AP18077 110 aaKnown RBP9.11□□□□□ -0.95
HDAC4-206ENST00000460235 GNG5P63218 68 aa9.11□□□□□ -0.95
HDAC4-206ENST00000460235 TREM1Q9NP99 234 aa9.11□□□□□ -0.95
HDAC4-206ENST00000460235 PSG8Q9UQ74 426 aa9.11□□□□□ -0.95
HDAC4-206ENST00000460235 ANK2Q01484 3957 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 INSP01308 110 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 CRISP2P16562 243 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 SMUG1Q53HV7 270 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 GDF5OSQ5U4N7 250 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 Q6ZWC4 215 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 PRNTQ86SH4 94 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 TMEM256Q8N2U0 113 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 PCNPQ8WW12 178 aaKnown RBP9.1□□□□□ -0.95
HDAC4-206ENST00000460235 RARRES2Q99969 163 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 VGLL1Q99990 258 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 WFDC10AQ9H1F0 79 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 SLC35B3Q9H1N7 401 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 GOLT1BQ9Y3E0 138 aa9.1□□□□□ -0.95
HDAC4-206ENST00000460235 SCO2A0A1W2PP80 73 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 K7EIL1 84 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 CA1P00915 261 aaPredicted RBP9.09□□□□□ -0.95
HDAC4-206ENST00000460235 FRMD6-AS1P0C7T7 363 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 ZNF705DP0CH99 300 aaPredicted RBP9.09□□□□□ -0.95
HDAC4-206ENST00000460235 ZNF705BP0CI00 300 aaPredicted RBP9.09□□□□□ -0.95
HDAC4-206ENST00000460235 GNG4P50150 75 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 DEFA6Q01524 100 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 ERCC8Q13216 396 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 ZNF124Q15973 351 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 NDUFA5Q16718 116 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 BAGE2Q86Y30 109 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 C2CD4CQ8TF44 421 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 IGF2BP2-AS1Q96M15 143 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 ASCL2Q99929 193 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 NIPSNAP3BQ9BS92 247 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 TMEM208Q9BTX3 173 aa9.09□□□□□ -0.95
HDAC4-206ENST00000460235 LINC00862A6NCI5 91 aa9.08□□□□□ -0.96
HDAC4-206ENST00000460235 RBMY1BA6NDE4 496 aaKnown RBP9.08□□□□□ -0.96
HDAC4-206ENST00000460235 RBMY1EA6NEQ0 496 aaKnown RBP9.08□□□□□ -0.96
HDAC4-206ENST00000460235 RBMY1DP0C7P1 496 aaKnown RBP9.08□□□□□ -0.96
HDAC4-206ENST00000460235 RPL35P42766 123 aaKnown RBP9.08□□□□□ -0.96
HDAC4-206ENST00000460235 CEBPGP53567 150 aa9.08□□□□□ -0.96
HDAC4-206ENST00000460235 SOHLH1Q5JUK2 328 aa9.08□□□□□ -0.96
HDAC4-206ENST00000460235 LINC00322Q6ZN03 302 aaPredicted RBP9.08□□□□□ -0.96
HDAC4-206ENST00000460235 CITED4Q96RK1 184 aa9.08□□□□□ -0.96
HDAC4-206ENST00000460235 ZMAT4Q9H898 229 aa9.08□□□□□ -0.96
HDAC4-206ENST00000460235 TP53TG1Q9Y2A0 90 aa9.08□□□□□ -0.96
HDAC4-206ENST00000460235 TRAV34A0A0B4J273 112 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 C7orf71A4D174 169 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 ZNF727A8MUV8 499 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 C9JCJ5 164 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 LTAP01374 205 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 PRB2P02812 416 aaPredicted RBP9.07□□□□□ -0.96
HDAC4-206ENST00000460235 NHLRC4P0CG21 123 aaPredicted RBP9.07□□□□□ -0.96
HDAC4-206ENST00000460235 SPINK13Q1W4C9 94 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 AMTNQ6UX39 209 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 Q86TA4 180 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 TMEM183AQ8IXX5 376 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 EIF4E3Q8N5X7 224 aaKnown RBP9.07□□□□□ -0.96
HDAC4-206ENST00000460235 RCHY1Q96PM5 261 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 SMIM7Q9BQ49 75 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 XCL2Q9UBD3 114 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 LY96Q9Y6Y9 160 aa9.07□□□□□ -0.96
HDAC4-206ENST00000460235 TRRAPQ9Y4A5 3859 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 TRAV8-1A0A0A6YYK1 113 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 TRAV21A0A0B4J279 112 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 SMIM9A6NGZ8 99 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 FABP5P3A8MUU1 101 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 KLLNB2CW77 178 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 H7BYZ3 331 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 SRP19P09132 144 aaKnown RBP9.06□□□□□ -0.96
HDAC4-206ENST00000460235 DEFB1P60022 68 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 ZNF674Q2M3X9 581 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 COMMD7Q86VX2 200 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 DAZAP1Q96EP5 407 aaKnown RBP9.06□□□□□ -0.96
HDAC4-206ENST00000460235 FAM19A4Q96LR4 140 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 SPATA25Q9BR10 227 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms