RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 BCAP31P51572 246 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 VAMP2P63027 116 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 SLAQ13239 276 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 FHL2Q14192 279 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 CNPY1Q3B7I2 92 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 CHAC2Q8WUX2 184 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 MRPL53Q96EL3 112 aaKnown RBP8.4□□□□□ -1.06
GPNMB-204ENST00000459927 ST6GAL2Q96JF0 529 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 SDHCQ99643 169 aaPredicted RBP8.4□□□□□ -1.06
GPNMB-204ENST00000459927 C11orf1Q9H5F2 150 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 PTTG2Q9NZH5 202 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 PRO0255Q9UI72 69 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 TP53TG3Q9ULZ0 132 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 PRELID1Q9Y255 219 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 WDR83OSQ9Y284 106 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 CENPXA8MT69 81 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 CST7O76096 145 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 NMBP08949 121 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 CRISP2P16562 243 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 BTCP35070 178 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 CRYBA4P53673 196 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 TCL1AP56279 114 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 BTN1A1Q13410 526 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 VWC2Q2TAL6 325 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 CDPF1Q6NVV7 123 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 Q6ZQT7 251 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 C9orf47Q6ZRZ4 202 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 NFE4Q86UQ8 179 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 PFDN5Q99471 154 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 SLC39A9Q9NUM3 307 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 TMEM14CQ9P0S9 112 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 ICOSQ9Y6W8 199 aa8.39□□□□□ -1.07
GPNMB-204ENST00000459927 TRAV9-2A0A087WT02 112 aa8.38□□□□□ -1.07
GPNMB-204ENST00000459927 A0A087WTM6 91 aa8.38□□□□□ -1.07
GPNMB-204ENST00000459927 IFNA5P01569 189 aa8.38□□□□□ -1.07
GPNMB-204ENST00000459927 IGHV3-53P01767 116 aa8.38□□□□□ -1.07
GPNMB-204ENST00000459927 S100A11P31949 105 aa8.38□□□□□ -1.07
GPNMB-204ENST00000459927 ERVFC1-1P60608 527 aa8.38□□□□□ -1.07
GPNMB-204ENST00000459927 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
GPNMB-204ENST00000459927 IBA57Q5T440 356 aaKnown RBP8.38□□□□□ -1.07
GPNMB-204ENST00000459927 TRIQKQ629K1 86 aa8.38□□□□□ -1.07
GPNMB-204ENST00000459927 EXOC3-AS1Q8N2X6 119 aa8.38□□□□□ -1.07
GPNMB-204ENST00000459927 MRPL32Q9BYC8 188 aaKnown RBP8.38□□□□□ -1.07
GPNMB-204ENST00000459927 UQCC1Q9NVA1 299 aa8.38□□□□□ -1.07
GPNMB-204ENST00000459927 LSM5Q9Y4Y9 91 aaKnown RBP8.38□□□□□ -1.07
GPNMB-204ENST00000459927 TIMM9Q9Y5J7 89 aa8.38□□□□□ -1.07
GPNMB-204ENST00000459927 IGHV1OR15-1A0A075B7D0 117 aa8.37□□□□□ -1.07
GPNMB-204ENST00000459927 CCDC160A6NGH7 325 aa8.37□□□□□ -1.07
GPNMB-204ENST00000459927 CCSO14618 274 aa8.37□□□□□ -1.07
GPNMB-204ENST00000459927 CAV2P51636 162 aa8.37□□□□□ -1.07
GPNMB-204ENST00000459927 ZNF846Q147U1 533 aa8.37□□□□□ -1.07
GPNMB-204ENST00000459927 NEGR1Q7Z3B1 354 aa8.37□□□□□ -1.07
GPNMB-204ENST00000459927 ZFAND2AQ8N6M9 145 aa8.37□□□□□ -1.07
GPNMB-204ENST00000459927 C8orf49Q96NF6 230 aa8.37□□□□□ -1.07
GPNMB-204ENST00000459927 VGLL1Q99990 258 aa8.37□□□□□ -1.07
GPNMB-204ENST00000459927 FAM25EA8MYX2 175 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 RGS13O14921 159 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 PYYP10082 97 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 IL15RAQ13261 267 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 PDE6HQ13956 83 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 ICAM4Q14773 271 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 IQCF2Q8IXL9 164 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 TMEM252Q8N6L7 170 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 BLNKQ8WV28 456 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 FRZBQ92765 325 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 C2orf50Q96LR7 162 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 MRPL16Q9NX20 251 aaKnown RBP8.36□□□□□ -1.07
GPNMB-204ENST00000459927 ZNF492Q9P255 531 aa8.36□□□□□ -1.07
GPNMB-204ENST00000459927 C5orf51A6NDU8 294 aa8.35□□□□□ -1.07
GPNMB-204ENST00000459927 K7EP13 123 aa8.35□□□□□ -1.07
GPNMB-204ENST00000459927 PLA2G10O15496 165 aa8.35□□□□□ -1.07
GPNMB-204ENST00000459927 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
GPNMB-204ENST00000459927 NBEAP1P0C6P0 100 aa8.35□□□□□ -1.07
GPNMB-204ENST00000459927 DNAH10OSP0CZ25 163 aa8.35□□□□□ -1.07
GPNMB-204ENST00000459927 SULT1A1P50225 295 aa8.35□□□□□ -1.07
GPNMB-204ENST00000459927 ATP6V1FQ16864 119 aa8.35□□□□□ -1.07
GPNMB-204ENST00000459927 PRR9Q5T870 116 aa8.35□□□□□ -1.07
GPNMB-204ENST00000459927 Q5VSD8 79 aa8.35□□□□□ -1.07
GPNMB-204ENST00000459927 AAMDCQ9H7C9 122 aa8.35□□□□□ -1.07
GPNMB-204ENST00000459927 LY96Q9Y6Y9 160 aa8.35□□□□□ -1.07
GPNMB-204ENST00000459927 IGSF23A1L1A6 192 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 E5RGE8 158 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 K7EQD1 137 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 TCRBP04435 133 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 PVALBP20472 110 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-204ENST00000459927 GCSHP23434 173 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 BAXQ07812 192 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 GCSAMLQ5JQS6 135 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 TMEM78Q5T7P6 136 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 FAM167A-AS1Q96KT0 104 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 SLC25A2Q9BXI2 301 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 RBM38Q9H0Z9 239 aaKnown RBP8.34□□□□□ -1.07
GPNMB-204ENST00000459927 LYRM2Q9NU23 88 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-204ENST00000459927 MSRB1Q9NZV6 116 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 MDFICQ9P1T7 246 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 VPS13BQ7Z7G8 4022 aa8.34□□□□□ -1.07
GPNMB-204ENST00000459927 IGKV2-40A0A087WW87 121 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-204ENST00000459927 TRGV4A0A0C4DH28 118 aa8.33□□□□□ -1.08
GPNMB-204ENST00000459927 IGKV2D-40P01614 121 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms