RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 OTORQ9NRC9 128 aa15.68■□□□□ 0.1
SSNA1-202ENST00000459860 IGKV2-40A0A087WW87 121 aaPredicted RBP15.67■□□□□ 0.1
SSNA1-202ENST00000459860 CTXND1A0A1B0GTU2 59 aa15.67■□□□□ 0.1
SSNA1-202ENST00000459860 LOC102723971A0A1B0GUV8 181 aa15.67■□□□□ 0.1
SSNA1-202ENST00000459860 IGKV2D-40P01614 121 aaPredicted RBP15.67■□□□□ 0.1
SSNA1-202ENST00000459860 CT45A10P0DMU9 189 aa15.67■□□□□ 0.1
SSNA1-202ENST00000459860 NANOS2P60321 138 aaKnown RBP15.67■□□□□ 0.1
SSNA1-202ENST00000459860 ERCC8Q13216 396 aa15.67■□□□□ 0.1
SSNA1-202ENST00000459860 AKAP14Q86UN6 197 aa15.67■□□□□ 0.1
SSNA1-202ENST00000459860 IQCF2Q8IXL9 164 aa15.67■□□□□ 0.1
SSNA1-202ENST00000459860 TMEM167BQ9NRX6 74 aa15.67■□□□□ 0.1
SSNA1-202ENST00000459860 GCHFRP30047 84 aa15.66■□□□□ 0.1
SSNA1-202ENST00000459860 EMP1P54849 157 aa15.66■□□□□ 0.1
SSNA1-202ENST00000459860 C9orf47Q6ZRZ4 202 aa15.66■□□□□ 0.1
SSNA1-202ENST00000459860 HYLS1Q96M11 299 aa15.66■□□□□ 0.1
SSNA1-202ENST00000459860 LINC01587Q99440 93 aa15.66■□□□□ 0.1
SSNA1-202ENST00000459860 TEX48A0A1B0GUV7 120 aa15.65■□□□□ 0.1
SSNA1-202ENST00000459860 RBAKDNA6NC62 111 aa15.65■□□□□ 0.1
SSNA1-202ENST00000459860 PGPA6NDG6 321 aa15.65■□□□□ 0.1
SSNA1-202ENST00000459860 J3KRW8 73 aa15.65■□□□□ 0.1
SSNA1-202ENST00000459860 TMUB2Q71RG4 321 aa15.65■□□□□ 0.1
SSNA1-202ENST00000459860 PHLDA1Q8WV24 401 aaPredicted RBP15.65■□□□□ 0.1
SSNA1-202ENST00000459860 AGPAT4-IT1Q9H0P7 198 aa15.65■□□□□ 0.1
SSNA1-202ENST00000459860 RPH3ALQ9UNE2 315 aa15.65■□□□□ 0.1
SSNA1-202ENST00000459860 KLK5Q9Y337 293 aaPredicted RBP15.65■□□□□ 0.1
SSNA1-202ENST00000459860 H7BYZ3 331 aa15.64■□□□□ 0.09
SSNA1-202ENST00000459860 SLC25A5P05141 298 aaKnown RBP15.64■□□□□ 0.09
SSNA1-202ENST00000459860 GFI1BQ5VTD9 330 aa15.64■□□□□ 0.09
SSNA1-202ENST00000459860 NIPSNAP3BQ9BS92 247 aa15.64■□□□□ 0.09
SSNA1-202ENST00000459860 ALMS1Q8TCU4 4167 aa15.64■□□□□ 0.09
SSNA1-202ENST00000459860 SEC11BP0C7V7 166 aa15.63■□□□□ 0.09
SSNA1-202ENST00000459860 SPART-AS1P0CW21 52 aa15.63■□□□□ 0.09
SSNA1-202ENST00000459860 ZNF138P52744 262 aa15.63■□□□□ 0.09
SSNA1-202ENST00000459860 TAS2R60P59551 318 aa15.63■□□□□ 0.09
SSNA1-202ENST00000459860 CEMP1Q6PRD7 247 aaPredicted RBP15.63■□□□□ 0.09
SSNA1-202ENST00000459860 ARL6IP6Q8N6S5 226 aa15.63■□□□□ 0.09
SSNA1-202ENST00000459860 VGLL1Q99990 258 aa15.63■□□□□ 0.09
SSNA1-202ENST00000459860 ZNF705GA8MUZ8 300 aaPredicted RBP15.62■□□□□ 0.09
SSNA1-202ENST00000459860 DIRC3C9JPN6 131 aa15.62■□□□□ 0.09
SSNA1-202ENST00000459860 C11orf94C9JXX5 98 aa15.62■□□□□ 0.09
SSNA1-202ENST00000459860 C1QBP02746 253 aa15.62■□□□□ 0.09
SSNA1-202ENST00000459860 TPT1P13693 172 aaKnown RBP15.62■□□□□ 0.09
SSNA1-202ENST00000459860 HTN1P15515 57 aa15.62■□□□□ 0.09
SSNA1-202ENST00000459860 SSX7Q7RTT5 188 aa15.62■□□□□ 0.09
SSNA1-202ENST00000459860 ZNF492Q9P255 531 aa15.62■□□□□ 0.09
SSNA1-202ENST00000459860 CELA1Q9UNI1 258 aa15.62■□□□□ 0.09
SSNA1-202ENST00000459860 GPX1P07203 203 aa15.61■□□□□ 0.09
SSNA1-202ENST00000459860 NMBP08949 121 aa15.61■□□□□ 0.09
SSNA1-202ENST00000459860 KIR3DS1Q14943 382 aa15.61■□□□□ 0.09
SSNA1-202ENST00000459860 ZNF726P1Q15940 193 aa15.61■□□□□ 0.09
SSNA1-202ENST00000459860 SUN5Q8TC36 379 aa15.61■□□□□ 0.09
SSNA1-202ENST00000459860 YTHDF2Q9Y5A9 579 aaKnown RBP15.61■□□□□ 0.09
SSNA1-202ENST00000459860 TRAV12-3A0A0B4J271 114 aa15.6■□□□□ 0.09
SSNA1-202ENST00000459860 C7orf71A4D174 169 aa15.6■□□□□ 0.09
SSNA1-202ENST00000459860 MAP1LC3B2A6NCE7 125 aa15.6■□□□□ 0.09
SSNA1-202ENST00000459860 UMAD1C9J7I0 102 aa15.6■□□□□ 0.09
SSNA1-202ENST00000459860 CRISP2P16562 243 aa15.6■□□□□ 0.09
SSNA1-202ENST00000459860 STOML3Q8TAV4 291 aa15.6■□□□□ 0.09
SSNA1-202ENST00000459860 FAM19A4Q96LR4 140 aa15.6■□□□□ 0.09
SSNA1-202ENST00000459860 MAP1LC3BQ9GZQ8 125 aa15.6■□□□□ 0.09
SSNA1-202ENST00000459860 TRBV7-9A0A0J9YWB2 115 aa15.59■□□□□ 0.09
SSNA1-202ENST00000459860 KLLNB2CW77 178 aa15.59■□□□□ 0.09
SSNA1-202ENST00000459860 FAM222AQ5U5X8 452 aa15.59■□□□□ 0.09
SSNA1-202ENST00000459860 GOLT1AQ6ZVE7 132 aa15.59■□□□□ 0.09
SSNA1-202ENST00000459860 CCDC28AQ8IWP9 274 aa15.59■□□□□ 0.09
SSNA1-202ENST00000459860 C5orf17Q8NAS9 161 aa15.59■□□□□ 0.09
SSNA1-202ENST00000459860 Q8TAT8 98 aa15.59■□□□□ 0.09
SSNA1-202ENST00000459860 C16orf74Q96GX8 76 aa15.59■□□□□ 0.09
SSNA1-202ENST00000459860 TRAV10A0A0B4J240 114 aa15.58■□□□□ 0.08
SSNA1-202ENST00000459860 SERTM2A0A1B0GWG4 89 aa15.58■□□□□ 0.08
SSNA1-202ENST00000459860 K7EQM0 130 aa15.58■□□□□ 0.08
SSNA1-202ENST00000459860 FGF8P55075 233 aaPredicted RBP15.58■□□□□ 0.08
SSNA1-202ENST00000459860 ZNF493Q6ZR52 646 aa15.58■□□□□ 0.08
SSNA1-202ENST00000459860 Q6ZTC4 211 aa15.58■□□□□ 0.08
SSNA1-202ENST00000459860 PYGO2Q9BRQ0 406 aa15.58■□□□□ 0.08
SSNA1-202ENST00000459860 DKK2Q9UBU2 259 aa15.58■□□□□ 0.08
SSNA1-202ENST00000459860 LENEPQ9Y5L5 61 aa15.58■□□□□ 0.08
SSNA1-202ENST00000459860 A0A1W2PRE2 83 aa15.57■□□□□ 0.08
SSNA1-202ENST00000459860 RNASE4P34096 147 aaKnown RBP15.57■□□□□ 0.08
SSNA1-202ENST00000459860 BTN1A1Q13410 526 aa15.57■□□□□ 0.08
SSNA1-202ENST00000459860 EIF5AL1Q6IS14 154 aaKnown RBP15.57■□□□□ 0.08
SSNA1-202ENST00000459860 TMEM263Q8WUH6 116 aaKnown RBP15.57■□□□□ 0.08
SSNA1-202ENST00000459860 TMED6Q8WW62 240 aa15.57■□□□□ 0.08
SSNA1-202ENST00000459860 GNG5P63218 68 aa15.56■□□□□ 0.08
SSNA1-202ENST00000459860 C12orf74Q32Q52 190 aa15.56■□□□□ 0.08
SSNA1-202ENST00000459860 LGALSLQ3ZCW2 172 aaPredicted RBP15.56■□□□□ 0.08
SSNA1-202ENST00000459860 DPPA3Q6W0C5 159 aa15.56■□□□□ 0.08
SSNA1-202ENST00000459860 ZNF767PQ75MW2 155 aa15.56■□□□□ 0.08
SSNA1-202ENST00000459860 FAM213BQ8TBF2 198 aa15.56■□□□□ 0.08
SSNA1-202ENST00000459860 C2CD4CQ8TF44 421 aa15.56■□□□□ 0.08
SSNA1-202ENST00000459860 LYRM9A8MSI8 78 aa15.55■□□□□ 0.08
SSNA1-202ENST00000459860 PRM2P04554 102 aa15.55■□□□□ 0.08
SSNA1-202ENST00000459860 AZU1P20160 251 aa15.55■□□□□ 0.08
SSNA1-202ENST00000459860 SUMO1P63165 101 aaKnown RBP15.55■□□□□ 0.08
SSNA1-202ENST00000459860 CD300CQ08708 224 aa15.55■□□□□ 0.08
SSNA1-202ENST00000459860 ZFP69Q49AA0 526 aa15.55■□□□□ 0.08
SSNA1-202ENST00000459860 ZFAND2AQ8N6M9 145 aa15.55■□□□□ 0.08
SSNA1-202ENST00000459860 TMPRSS5Q9H3S3 457 aa15.55■□□□□ 0.08
SSNA1-202ENST00000459860 GGTLC3B5MD39 225 aa15.54■□□□□ 0.08
SSNA1-202ENST00000459860 TCRAP04437 139 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms