RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.96□□□□□ -1.14
USP39-210ENST00000459775 C5orf17Q8NAS9 161 aa7.96□□□□□ -1.14
USP39-210ENST00000459775 C20orf173Q96LM9 149 aa7.96□□□□□ -1.14
USP39-210ENST00000459775 GGTLC1Q9BX51 225 aa7.96□□□□□ -1.14
USP39-210ENST00000459775 NBEAL1Q6ZS30 2694 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 A0A0G2JLM5 398 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 IGLC1P0CG04 106 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 CD28P10747 220 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 VPREB1P12018 145 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 ADCYAP1P18509 176 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 ATP5G2Q06055 141 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 AWAT1Q58HT5 328 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 OR2G3Q8NGZ4 309 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 ZNF502Q8TBZ5 544 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 ZNF414Q96IQ9 312 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 GNB4Q9HAV0 340 aa7.95□□□□□ -1.14
USP39-210ENST00000459775 LOC102724200A0A096LPH7 203 aaPredicted RBP7.94□□□□□ -1.14
USP39-210ENST00000459775 CTSGP08311 255 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 GNG4P50150 75 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 KRTAP10-3P60369 221 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 DEFB136Q30KP8 78 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 SPATA31B1PQ5VZV4 182 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 THYN1Q9P016 225 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 LINC00869P0C866 280 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 RPS28P62857 69 aaKnown RBP7.94□□□□□ -1.14
USP39-210ENST00000459775 FHL3Q13643 280 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 CD164L2Q6UWJ8 174 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 STPG3Q8N7X2 389 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 OR4X2Q8NGF9 303 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 RNF114Q9Y508 228 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 SELENOKQ9Y6D0 94 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 PXMP4Q9Y6I8 212 aa7.94□□□□□ -1.14
USP39-210ENST00000459775 A0A1B0GV50 99 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 GAGE12HA6NDE8 117 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 OR4C46A6NHA9 309 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 FABP5P3A8MUU1 101 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 USP17L23D6RBM5 183 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 SLC35B1P78383 322 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 KLK9Q2XQG4 91 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 FFAR4Q5NUL3 377 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 GTF2H5Q6ZYL4 71 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 STPG4Q8N801 248 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 KLK9Q9UKQ9 250 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 GAGE12JA6NER3 117 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 ZNF705GA8MUZ8 300 aaPredicted RBP7.93□□□□□ -1.14
USP39-210ENST00000459775 GAGE7O76087 117 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 GAGE12FP0CL80 117 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 GAGE12GP0CL81 117 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 GAGE12IP0CL82 117 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 GAGE4Q13068 117 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 ADAMTSL5Q6ZMM2 481 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 CYP2G1PQ6ZSU1 146 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 ZNF491Q8N8L2 437 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 THAP8Q8NA92 274 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 EEF1AKMT3Q96AZ1 226 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 C16orf95Q9H693 158 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 RPRMQ9NS64 109 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 ZNF580Q9UK33 172 aa7.93□□□□□ -1.14
USP39-210ENST00000459775 A0A1B0GX51 115 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 TCRBV4S1A1TA0A5B7 111 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 FAM223BA6NKX1 122 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 NDUFA7O95182 113 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 PRR20EP86478 221 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 PRR20CP86479 221 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 PRR20DP86480 221 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 PRR20BP86481 221 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 PRR20AP86496 221 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 MORN5Q5VZ52 161 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 FAM223AQ8IWN6 122 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 ZNF709Q8N972 641 aa7.92□□□□□ -1.14
USP39-210ENST00000459775 FNDC10F2Z333 226 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 ZNF207O43670 478 aaKnown RBP7.91□□□□□ -1.14
USP39-210ENST00000459775 ORM2P19652 201 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 PROK1P58294 105 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 ZNF726P1Q15940 193 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 BATFQ16520 125 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 C4orf26Q17RF5 130 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 PATE2Q6UY27 113 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 FAM19A5Q7Z5A7 132 aaPredicted RBP7.91□□□□□ -1.14
USP39-210ENST00000459775 RPP25LQ8N5L8 163 aaKnown RBP7.91□□□□□ -1.14
USP39-210ENST00000459775 BLNKQ8WV28 456 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 TMEM37Q8WXS4 190 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 C1QTNF4Q9BXJ3 329 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 SLC39A9Q9NUM3 307 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 IGHV3-49A0A0A0MS15 119 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 CLPSL1A2RUU4 121 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.91□□□□□ -1.14
USP39-210ENST00000459775 H3BUA1 57 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 H7BYZ3 331 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 BMPR1BO00238 502 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 ELANEP08246 267 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 SEC11BP0C7V7 166 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 XGP55808 180 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 RPL15P61313 204 aaKnown RBP7.91□□□□□ -1.14
USP39-210ENST00000459775 LYZP61626 148 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 RPL24P83731 157 aaKnown RBP7.91□□□□□ -1.14
USP39-210ENST00000459775 MEF2BQ02080 365 aaPredicted RBP7.91□□□□□ -1.14
USP39-210ENST00000459775 PRR31Q5SQ13 230 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 C3orf56Q8N813 242 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 OR51G1Q8NGK1 321 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms