RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 TCTE3Q8IZS6 198 aa14.84□□□□□ -0.03
VARS-218ENST00000459667 RAB24Q969Q5 203 aa14.84□□□□□ -0.03
VARS-218ENST00000459667 CYTL1Q9NRR1 136 aa14.84□□□□□ -0.03
VARS-218ENST00000459667 DKK2Q9UBU2 259 aa14.84□□□□□ -0.03
VARS-218ENST00000459667 HMGB3O15347 200 aaKnown RBP14.83□□□□□ -0.04
VARS-218ENST00000459667 PFDN1O60925 122 aa14.83□□□□□ -0.04
VARS-218ENST00000459667 PRM2P04554 102 aa14.83□□□□□ -0.04
VARS-218ENST00000459667 STAG3L2P0CL84 134 aa14.83□□□□□ -0.04
VARS-218ENST00000459667 STAG3L3P0CL85 134 aa14.83□□□□□ -0.04
VARS-218ENST00000459667 FAM74A1Q5RGS3 127 aa14.83□□□□□ -0.04
VARS-218ENST00000459667 GFI1BQ5VTD9 330 aa14.83□□□□□ -0.04
VARS-218ENST00000459667 Q9H3A6 140 aa14.83□□□□□ -0.04
VARS-218ENST00000459667 hCG_2014768A0A024R1R8 64 aa14.82□□□□□ -0.04
VARS-218ENST00000459667 IGLL5B9A064 214 aa14.82□□□□□ -0.04
VARS-218ENST00000459667 J3KRW8 73 aa14.82□□□□□ -0.04
VARS-218ENST00000459667 BCL2L11O43521 198 aa14.82□□□□□ -0.04
VARS-218ENST00000459667 ARL14EPLP0DKL9 152 aa14.82□□□□□ -0.04
VARS-218ENST00000459667 EIF5AP63241 154 aaKnown RBP14.82□□□□□ -0.04
VARS-218ENST00000459667 C20orf144Q9BQM9 153 aa14.82□□□□□ -0.04
VARS-218ENST00000459667 IGKV2-40A0A087WW87 121 aaPredicted RBP14.81□□□□□ -0.04
VARS-218ENST00000459667 LY6G6CO95867 125 aa14.81□□□□□ -0.04
VARS-218ENST00000459667 CXorf1O96002 111 aa14.81□□□□□ -0.04
VARS-218ENST00000459667 IGKV2D-40P01614 121 aaPredicted RBP14.81□□□□□ -0.04
VARS-218ENST00000459667 TAS2R60P59551 318 aa14.81□□□□□ -0.04
VARS-218ENST00000459667 AKAP14Q86UN6 197 aa14.81□□□□□ -0.04
VARS-218ENST00000459667 RXFP4Q8TDU9 374 aa14.81□□□□□ -0.04
VARS-218ENST00000459667 LINC00477Q96M19 166 aa14.81□□□□□ -0.04
VARS-218ENST00000459667 NIPSNAP3BQ9BS92 247 aa14.81□□□□□ -0.04
VARS-218ENST00000459667 ZNF471Q9BX82 626 aaPredicted RBP14.81□□□□□ -0.04
VARS-218ENST00000459667 DEFB131BA0A096LNP1 70 aa14.8□□□□□ -0.04
VARS-218ENST00000459667 H7BYZ3 331 aa14.8□□□□□ -0.04
VARS-218ENST00000459667 HTN1P15515 57 aa14.8□□□□□ -0.04
VARS-218ENST00000459667 AZU1P20160 251 aa14.8□□□□□ -0.04
VARS-218ENST00000459667 TCTAP57738 103 aa14.8□□□□□ -0.04
VARS-218ENST00000459667 TMEM78Q5T7P6 136 aa14.8□□□□□ -0.04
VARS-218ENST00000459667 CMTM2Q8TAZ6 248 aa14.8□□□□□ -0.04
VARS-218ENST00000459667 AGPAT4-IT1Q9H0P7 198 aa14.8□□□□□ -0.04
VARS-218ENST00000459667 OTORQ9NRC9 128 aa14.8□□□□□ -0.04
VARS-218ENST00000459667 TMEM167BQ9NRX6 74 aa14.8□□□□□ -0.04
VARS-218ENST00000459667 HYDINQ4G0P3 5121 aa14.8□□□□□ -0.04
VARS-218ENST00000459667 CTXND1A0A1B0GTU2 59 aa14.79□□□□□ -0.04
VARS-218ENST00000459667 GCHFRP30047 84 aa14.79□□□□□ -0.04
VARS-218ENST00000459667 C9orf47Q6ZRZ4 202 aa14.79□□□□□ -0.04
VARS-218ENST00000459667 DNAH1Q9P2D7 4330 aa14.79□□□□□ -0.04
VARS-218ENST00000459667 PGPA6NDG6 321 aa14.78□□□□□ -0.04
VARS-218ENST00000459667 C1QBP02746 253 aa14.78□□□□□ -0.04
VARS-218ENST00000459667 TMUB2Q71RG4 321 aa14.78□□□□□ -0.04
VARS-218ENST00000459667 IQCF2Q8IXL9 164 aa14.78□□□□□ -0.04
VARS-218ENST00000459667 C16orf74Q96GX8 76 aa14.78□□□□□ -0.04
VARS-218ENST00000459667 FAM19A4Q96LR4 140 aa14.78□□□□□ -0.04
VARS-218ENST00000459667 VGLL1Q99990 258 aa14.78□□□□□ -0.04
VARS-218ENST00000459667 PLA2G2EQ9NZK7 142 aa14.78□□□□□ -0.04
VARS-218ENST00000459667 IGHV4-4A0A075B6R2 117 aa14.77□□□□□ -0.05
VARS-218ENST00000459667 TRAV12-3A0A0B4J271 114 aa14.77□□□□□ -0.05
VARS-218ENST00000459667 PLAC8L1A1L4L8 177 aa14.77□□□□□ -0.05
VARS-218ENST00000459667 LYRM9A8MSI8 78 aa14.77□□□□□ -0.05
VARS-218ENST00000459667 SLC25A5P05141 298 aaKnown RBP14.77□□□□□ -0.05
VARS-218ENST00000459667 SEC11BP0C7V7 166 aa14.77□□□□□ -0.05
VARS-218ENST00000459667 DAD1P61803 113 aa14.77□□□□□ -0.05
VARS-218ENST00000459667 HYLS1Q96M11 299 aa14.77□□□□□ -0.05
VARS-218ENST00000459667 APLNQ9ULZ1 77 aa14.77□□□□□ -0.05
VARS-218ENST00000459667 C7orf71A4D174 169 aa14.76□□□□□ -0.05
VARS-218ENST00000459667 RBAKDNA6NC62 111 aa14.76□□□□□ -0.05
VARS-218ENST00000459667 KLLNB2CW77 178 aa14.76□□□□□ -0.05
VARS-218ENST00000459667 TPT1P13693 172 aaKnown RBP14.76□□□□□ -0.05
VARS-218ENST00000459667 ARL6IP6Q8N6S5 226 aa14.76□□□□□ -0.05
VARS-218ENST00000459667 TMEM263Q8WUH6 116 aaKnown RBP14.76□□□□□ -0.05
VARS-218ENST00000459667 UMAD1C9J7I0 102 aa14.75□□□□□ -0.05
VARS-218ENST00000459667 CRISP2P16562 243 aa14.75□□□□□ -0.05
VARS-218ENST00000459667 LGALS9CQ6DKI2 356 aa14.75□□□□□ -0.05
VARS-218ENST00000459667 ZNF493Q6ZR52 646 aa14.75□□□□□ -0.05
VARS-218ENST00000459667 SUN5Q8TC36 379 aa14.75□□□□□ -0.05
VARS-218ENST00000459667 RNASE8Q8TDE3 154 aaKnown RBP14.75□□□□□ -0.05
VARS-218ENST00000459667 ZNF492Q9P255 531 aa14.75□□□□□ -0.05
VARS-218ENST00000459667 DIRC3C9JPN6 131 aa14.74□□□□□ -0.05
VARS-218ENST00000459667 GPX1P07203 203 aa14.74□□□□□ -0.05
VARS-218ENST00000459667 NMBP08949 121 aa14.74□□□□□ -0.05
VARS-218ENST00000459667 HTN3P15516 51 aa14.74□□□□□ -0.05
VARS-218ENST00000459667 ZNF138P52744 262 aa14.74□□□□□ -0.05
VARS-218ENST00000459667 BTN1A1Q13410 526 aa14.74□□□□□ -0.05
VARS-218ENST00000459667 CCDC28AQ8IWP9 274 aa14.74□□□□□ -0.05
VARS-218ENST00000459667 Q8TAT8 98 aa14.74□□□□□ -0.05
VARS-218ENST00000459667 STOML3Q8TAV4 291 aa14.74□□□□□ -0.05
VARS-218ENST00000459667 RPH3ALQ9UNE2 315 aa14.74□□□□□ -0.05
VARS-218ENST00000459667 TRBV7-9A0A0J9YWB2 115 aa14.73□□□□□ -0.05
VARS-218ENST00000459667 RNASE4P34096 147 aaKnown RBP14.73□□□□□ -0.05
VARS-218ENST00000459667 CD300CQ08708 224 aa14.73□□□□□ -0.05
VARS-218ENST00000459667 ZNF726P1Q15940 193 aa14.73□□□□□ -0.05
VARS-218ENST00000459667 EIF5AL1Q6IS14 154 aaKnown RBP14.73□□□□□ -0.05
VARS-218ENST00000459667 SSX7Q7RTT5 188 aa14.73□□□□□ -0.05
VARS-218ENST00000459667 PYGO2Q9BRQ0 406 aa14.73□□□□□ -0.05
VARS-218ENST00000459667 TIMM8BQ9Y5J9 83 aaPredicted RBP14.73□□□□□ -0.05
VARS-218ENST00000459667 MAP1LC3B2A6NCE7 125 aa14.72□□□□□ -0.05
VARS-218ENST00000459667 DEFB130BP0DP73 79 aa14.72□□□□□ -0.05
VARS-218ENST00000459667 DEFB130AP0DP74 79 aa14.72□□□□□ -0.05
VARS-218ENST00000459667 LGALSLQ3ZCW2 172 aaPredicted RBP14.72□□□□□ -0.05
VARS-218ENST00000459667 ZFAND2AQ8N6M9 145 aa14.72□□□□□ -0.05
VARS-218ENST00000459667 C5orf17Q8NAS9 161 aa14.72□□□□□ -0.05
VARS-218ENST00000459667 NDUFAF3Q9BU61 184 aa14.72□□□□□ -0.05
VARS-218ENST00000459667 MAP1LC3BQ9GZQ8 125 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms