RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 PIGPP57054 158 aa-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 RANP62826 216 aaKnown RBP-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 FADDQ13158 208 aa-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 TAF1AQ15573 450 aaPredicted RBP-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 C20orf196Q8IYI0 205 aa-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 KRT222Q8N1A0 295 aa-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 OR4B1Q8NGF8 309 aa-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 OR52A5Q9H2C5 316 aa-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 COMMD3Q9UBI1 195 aa-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 HPCAL4Q9UM19 191 aa-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 TMEM56-RWDD3S4R434 201 aa-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 PKD1L2Q7Z442 2459 aa-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 GOLGA3Q08378 1498 aa-1.82□□□□□ -2.7
SNORD42B-201ENST00000458893 PLXNA2O75051 1894 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 ERCC6L2Q5T890 1561 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 ARL5CA6NH57 179 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 ADAP1O75689 374 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 TNFAIP8O95379 198 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 ATP6V1G2O95670 118 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 HLA-DRB1P01911 266 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 UCHL3P15374 230 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 CAPZBP47756 277 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 TMED1Q13445 227 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 BCL2L15Q5TBC7 163 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 TNFAIP8L2Q6P589 184 aaPredicted RBP-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 LYPD5Q6UWN5 251 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 IZUMO2Q6UXV1 221 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 FAM9BQ8IZU0 186 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 RIBC1Q8N443 379 aaPredicted RBP-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 CDRT4Q8N9R6 151 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 EFCAB11Q9BUY7 163 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 CCDC90BQ9GZT6 254 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 NT5C3AQ9H0P0 336 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 ZNF609O15014 1411 aa-1.83□□□□□ -2.7
SNORD42B-201ENST00000458893 ADGRB1O14514 1584 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 H0YAA0 97 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 I3L2K1 104 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 DEGS1O15121 323 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 CRYZL1O95825 349 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 OTCP00480 354 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 IGKCP01834 107 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 RBP1P09455 135 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 IL7P13232 177 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 HLA-EP13747 358 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 HIST1H1TP22492 207 aaPredicted RBP-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 CLDN12P56749 244 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 KLRD1Q13241 179 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 RSU1Q15404 277 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 C18orf21Q32NC0 220 aaPredicted RBP-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 FAM45BPQ6NSW5 357 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 LINC00523Q86TU6 105 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 C9orf62Q8N4C0 152 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 TMEM229BQ8NBD8 167 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 OR8J3Q8NGG0 315 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 C2orf50Q96LR7 162 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 NPCDR1Q9BY65 106 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 TRIM4Q9C037 500 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 SCN3BQ9NY72 215 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 KNL1Q8NG31 2342 aa-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 MYO5AQ9Y4I1 1855 aaKnown RBP-1.84□□□□□ -2.7
SNORD42B-201ENST00000458893 ANK1P16157 1881 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 C3orf85A0A1B0GTC6 90 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 A0A1B0GW15 77 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 A0A1W2PPV4 95 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 MFSD11O43934 449 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 NDUFS6O75380 124 aaKnown RBP-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 CST4P01036 141 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 SLC35E2BP0CK96 405 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 SMIM10L2AP0DMW4 78 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 SMIM10L2BP0DMW5 78 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 IDO1P14902 403 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 DEFB1P60022 68 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 VAMP3Q15836 100 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 LYRM7Q5U5X0 104 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 LINC00269Q8N2A0 174 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 ANKRD29Q8N6D5 301 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 CIB3Q96Q77 187 aaPredicted RBP-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 MAP1LC3AQ9H492 121 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 NPVFQ9HCQ7 196 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 EYSQ5T1H1 3165 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 KIAA1549LQ6ZVL6 1849 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 TROQ12816 1431 aaPredicted RBP-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 FAM135BQ49AJ0 1406 aa-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 GCN1Q92616 2671 aaKnown RBP-1.85□□□□□ -2.71
SNORD42B-201ENST00000458893 COL6A5A8TX70 2615 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 NBEAL2Q6ZNJ1 2754 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 PAPPAQ13219 1627 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 GSTTP1A0A1W2PQM5 241 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 ATP5HO75947 161 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 LYPLA2O95372 231 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 IFNGP01579 166 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 ATP5J2P56134 94 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 UBE2BP63146 152 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 IAH1Q2TAA2 248 aaPredicted RBP-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 H1FX-AS1Q4G0G2 97 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 C4orf33Q8N1A6 199 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 BCL7BQ9BQE9 202 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 C20orf27Q9GZN8 174 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 TMEM133Q9H2Q1 129 aa-1.86□□□□□ -2.71
SNORD42B-201ENST00000458893 EXTL2Q9UBQ6 330 aa-1.86□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms