RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 FAM106AQ4KMX7 169 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 FAM104BQ5XKR9 115 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 Q6ZS92 163 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 PIP4P1Q86T03 277 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 ZNF414Q96IQ9 312 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 C17orf77Q96MU5 243 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 RNF5Q99942 180 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 RABAC1Q9UI14 185 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 D6R8Y8 96 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 K7EIM0 57 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 SMAD7O15105 426 aaKnown RBP6.68□□□□□ -1.34
VPS50-208ENST00000458707 LOXL1Q08397 574 aaPredicted RBP6.68□□□□□ -1.34
VPS50-208ENST00000458707 PDE6HQ13956 83 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 ADAMTSL5Q6ZMM2 481 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 ZNF491Q8N8L2 437 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 FAM57AQ8TBR7 257 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 PIFOQ8TCI5 191 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 CCL17Q92583 94 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 VPREB3Q9UKI3 123 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 WI2-2373I1.2A0A1W2PRP0 233 aa6.67□□□□□ -1.34
VPS50-208ENST00000458707 TMEM8BA6NDV4 472 aa6.67□□□□□ -1.34
VPS50-208ENST00000458707 BUB1B-PAK6H3BSN5 160 aa6.67□□□□□ -1.34
VPS50-208ENST00000458707 RBP4P02753 201 aa6.67□□□□□ -1.34
VPS50-208ENST00000458707 BSPH1Q075Z2 132 aa6.67□□□□□ -1.34
VPS50-208ENST00000458707 ORMDL3Q8N138 153 aa6.67□□□□□ -1.34
VPS50-208ENST00000458707 OR4X2Q8NGF9 303 aa6.67□□□□□ -1.34
VPS50-208ENST00000458707 OR8A1Q8NGG7 326 aa6.67□□□□□ -1.34
VPS50-208ENST00000458707 RNF183Q96D59 192 aa6.67□□□□□ -1.34
VPS50-208ENST00000458707 PRELID3AQ96N28 172 aa6.67□□□□□ -1.34
VPS50-208ENST00000458707 TIMM8BQ9Y5J9 83 aaPredicted RBP6.67□□□□□ -1.34
VPS50-208ENST00000458707 TSSC4Q9Y5U2 329 aaPredicted RBP6.67□□□□□ -1.34
VPS50-208ENST00000458707 INSIG2Q9Y5U4 225 aa6.67□□□□□ -1.34
VPS50-208ENST00000458707 A1L4Q6 167 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 LINC01546A6NGU7 62 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 C16orf97H3BN30 126 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 M0QXV9 152 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 KLK10O43240 276 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 HBDP02042 147 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 CT45A10P0DMU9 189 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 MRPL51Q4U2R6 128 aaKnown RBP6.66□□□□□ -1.34
VPS50-208ENST00000458707 LYZL1Q6UWQ5 148 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 RNASE6Q93091 150 aaKnown RBP6.66□□□□□ -1.34
VPS50-208ENST00000458707 RNF125Q96EQ8 232 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 C8orf49Q96NF6 230 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 JMJD8Q96S16 334 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 FBXL15Q9H469 300 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 JKAMPQ9P055 326 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 A0A087WX48 190 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 LY6LH3BQJ8 138 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 CACNG7P62955 275 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 AMN1Q8IY45 258 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 NRGNQ92686 78 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 AP1S3Q96PC3 154 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 ASCL2Q99929 193 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 ROS1P08922 2347 aa6.66□□□□□ -1.34
VPS50-208ENST00000458707 M0R3E3 92 aa6.65□□□□□ -1.34
VPS50-208ENST00000458707 SH2D1AO60880 128 aa6.65□□□□□ -1.34
VPS50-208ENST00000458707 UQCRFS1P47985 274 aa6.65□□□□□ -1.34
VPS50-208ENST00000458707 KIR3DS1Q14943 382 aa6.65□□□□□ -1.34
VPS50-208ENST00000458707 PSMG4Q5JS54 123 aa6.65□□□□□ -1.34
VPS50-208ENST00000458707 IFI27L1Q96BM0 104 aa6.65□□□□□ -1.34
VPS50-208ENST00000458707 PKDREJQ9NTG1 2253 aa6.65□□□□□ -1.35
VPS50-208ENST00000458707 HELZ2Q9BYK8 2649 aaKnown RBP6.65□□□□□ -1.35
VPS50-208ENST00000458707 A0A0G2JLM5 398 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 A0A0G2JNJ9 132 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 LOC389332A0A1B0GUA5 103 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 TEX48A0A1B0GUV7 120 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 SHISA9B4DS77 424 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 IL4P05112 153 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 SRSF2Q01130 221 aaKnown RBP6.64□□□□□ -1.35
VPS50-208ENST00000458707 PLGLAQ15195 96 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 OR2K2Q8NGT1 345 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 AAMDCQ9H7C9 122 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 Q9UFV3 132 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 ZZEF1O43149 2961 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 POLEQ07864 2286 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 H3BUT2 72 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 NDUFS7O75251 213 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 IGLC6P0CF74 106 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 FCGR2BP31994 310 aaPredicted RBP6.64□□□□□ -1.35
VPS50-208ENST00000458707 TTC9CQ8N5M4 171 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 CNFNQ9BYD5 112 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 ZMAT4Q9H898 229 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 HIGD1BQ9P298 99 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 CYSLTR1Q9Y271 337 aa6.64□□□□□ -1.35
VPS50-208ENST00000458707 CSDC2Q9Y534 153 aaKnown RBP6.64□□□□□ -1.35
VPS50-208ENST00000458707 PCNX1Q96RV3 2341 aa6.63□□□□□ -1.35
VPS50-208ENST00000458707 OTOGLQ3ZCN5 2332 aa6.63□□□□□ -1.35
VPS50-208ENST00000458707 A0A1W2PPM0 123 aa6.63□□□□□ -1.35
VPS50-208ENST00000458707 NPYP01303 97 aa6.63□□□□□ -1.35
VPS50-208ENST00000458707 DLX1P56177 255 aa6.63□□□□□ -1.35
VPS50-208ENST00000458707 SRSF1Q07955 248 aaKnown RBP eCLIP6.63□□□□□ -1.35
VPS50-208ENST00000458707 ZNF575Q86XF7 245 aa6.63□□□□□ -1.35
VPS50-208ENST00000458707 DEFB124Q8NES8 71 aa6.63□□□□□ -1.35
VPS50-208ENST00000458707 RPEQ96AT9 228 aa6.63□□□□□ -1.35
VPS50-208ENST00000458707 PRR25Q96S07 402 aa6.63□□□□□ -1.35
VPS50-208ENST00000458707 SMG1Q96Q15 3661 aaKnown RBP6.63□□□□□ -1.35
VPS50-208ENST00000458707 B5MCH6 92 aa6.62□□□□□ -1.35
VPS50-208ENST00000458707 NDUFA3O95167 84 aa6.62□□□□□ -1.35
VPS50-208ENST00000458707 EGR2P11161 476 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms