RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CTSGP08311 255 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 SLC25A16P16260 332 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 S100A4P26447 101 aaKnown RBP2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 ASIPP42127 132 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 UBE2E1P51965 193 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 DLX1P56177 255 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 HERVK_113P61574 105 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 ATP5G2Q06055 141 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 SRSF1Q07955 248 aaKnown RBP eCLIP2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 LOXL1Q08397 574 aaPredicted RBP2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 KLRB1Q12918 225 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 FOXC1Q12948 553 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 ODF1Q14990 250 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 SAMD5Q5TGI4 173 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 SAMD13Q5VXD3 122 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 PRSS57Q6UWY2 283 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 ADAMTSL5Q6ZMM2 481 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 IL17RELQ6ZVW7 336 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 FAM223AQ8IWN6 122 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 BCL6BQ8N143 479 aaPredicted RBP2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 Q8N6K4 173 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 OR11H1Q8NG94 326 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 OR11H2Q8NH07 326 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 TMEM158Q8WZ71 300 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 RAB37Q96AX2 223 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 C16orf92Q96LL3 132 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 VGLL1Q99990 258 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 MEGF9Q9H1U4 602 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 TP73-AS1Q9UF72 201 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 MOB4Q9Y3A3 225 aa2.59□□□□□ -1.99
HMGN1P18-201ENST00000457642 OTOGLQ3ZCN5 2332 aa2.59□□□□□ -2
HMGN1P18-201ENST00000457642 PLXNB1O43157 2135 aa2.59□□□□□ -2
HMGN1P18-201ENST00000457642 PKDREJQ9NTG1 2253 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 CACNA1HO95180 2353 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 IGHV4-4A0A075B6R2 117 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 A0A087WX48 190 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 TRAV21A0A0B4J279 112 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 PRSS47A8MTI9 375 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 F8W735 103 aaPredicted RBP2.58□□□□□ -2
HMGN1P18-201ENST00000457642 LINC01619G3V211 115 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 H3BUA1 57 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 H7C1H1 209 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 M0R381 172 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 OVOL3O00110 214 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 ATP6V0E1O15342 81 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 BUB3O43684 328 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 MED14OSP0DP75 135 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 ARL3P36405 182 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 NBL1P41271 181 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 ZNF80P51504 273 aaPredicted RBP2.58□□□□□ -2
HMGN1P18-201ENST00000457642 TCTAP57738 103 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 FXYD7P58549 80 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 RPL24P83731 157 aaKnown RBP2.58□□□□□ -2
HMGN1P18-201ENST00000457642 NDPQ00604 133 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 PAX8Q06710 450 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 ERCC8Q13216 396 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 KLK9Q2XQG4 91 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 FAM106AQ4KMX7 169 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 PRR30Q53SZ7 412 aaPredicted RBP2.58□□□□□ -2
HMGN1P18-201ENST00000457642 PAPPA-AS1Q5QFB9 102 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 ZC2HC1BQ5TFG8 222 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 C11orf71Q6IPW1 123 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 UFSP1Q6NVU6 142 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 CLEC19AQ6UXS0 136 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 C9orf47Q6ZRZ4 202 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 C8orf86Q6ZUL3 223 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 GTSCR1Q86UQ5 136 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 DTX2Q86UW9 622 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 WFDC3Q8IUB2 231 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 CEND1Q8N111 149 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 DYNAPQ8N1N2 210 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 Q8N9W7 124 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 RNF185Q96GF1 192 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 ZNF479Q96JC4 524 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 LINC00477Q96M19 166 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 SCGB3A1Q96QR1 104 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 HIST1H4GQ99525 98 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 C20orf78Q9BR46 151 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 SMIM2Q9BVW6 85 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 SIRPDQ9H106 197 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 DPH3P1Q9H4G8 78 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 ZMAT4Q9H898 229 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 ZFAND3Q9H8U3 227 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 TMEM160Q9NX00 188 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 NHP2Q9NX24 153 aaKnown RBP2.58□□□□□ -2
HMGN1P18-201ENST00000457642 DKK2Q9UBU2 259 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 KLK9Q9UKQ9 250 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 PHLDA3Q9Y5J5 127 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 SMAD5-AS1Q9Y6J3 95 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 ZNF318Q5VUA4 2279 aa2.58□□□□□ -2
HMGN1P18-201ENST00000457642 CNOT1A5YKK6 2376 aaKnown RBP2.58□□□□□ -2
HMGN1P18-201ENST00000457642 CEP250Q9BV73 2442 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 TRBV25-1A0A075B6N4 114 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 IGHV3OR16-8A0A075B7F1 116 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 TRAV41A0A0B4J266 112 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 IGHV3-35A0A0C4DH35 117 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 IGHV3-66A0A0C4DH42 116 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 TRBV7-9A0A0J9YWB2 115 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 TMEM8BA6NDV4 472 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms