RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TRAV8-2A0A0B4J237 113 aa12.81□□□□□ -0.36
CCDC43-202ENST00000457422 IGLC6P0CF74 106 aa12.81□□□□□ -0.36
CCDC43-202ENST00000457422 ARL3P36405 182 aa12.81□□□□□ -0.36
CCDC43-202ENST00000457422 USMG5Q96IX5 58 aa12.81□□□□□ -0.36
CCDC43-202ENST00000457422 PSMG3-AS1Q96PY0 264 aa12.81□□□□□ -0.36
CCDC43-202ENST00000457422 MYO18BQ8IUG5 2567 aa12.8□□□□□ -0.36
CCDC43-202ENST00000457422 USP24Q9UPU5 2620 aa12.8□□□□□ -0.36
CCDC43-202ENST00000457422 UTP20O75691 2785 aaKnown RBP12.8□□□□□ -0.36
CCDC43-202ENST00000457422 EREGO14944 169 aa12.8□□□□□ -0.36
CCDC43-202ENST00000457422 CRXO43186 299 aaPredicted RBP12.8□□□□□ -0.36
CCDC43-202ENST00000457422 AVPP01185 164 aa12.8□□□□□ -0.36
CCDC43-202ENST00000457422 C8orf86Q6ZUL3 223 aa12.8□□□□□ -0.36
CCDC43-202ENST00000457422 ZNF575Q86XF7 245 aa12.8□□□□□ -0.36
CCDC43-202ENST00000457422 SNHG12Q9BXW3 62 aa12.8□□□□□ -0.36
CCDC43-202ENST00000457422 CLEC5AQ9NY25 188 aa12.8□□□□□ -0.36
CCDC43-202ENST00000457422 FABP5P3A8MUU1 101 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 M0R143 59 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 OR5AL1P0C617 328 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 SLC25A16P16260 332 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 SPATA45Q537H7 98 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 FER1L6-AS1Q8NA97 138 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 GLMPQ8WWB7 406 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 CELSR2Q9HCU4 2923 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 NDUFA4O00483 81 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 TRBV12-3P01733 135 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 FAM104BQ5XKR9 115 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 TMEM70Q9BUB7 260 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 U3KQK5 164 aa12.79□□□□□ -0.36
CCDC43-202ENST00000457422 TMEM213A2RRL7 107 aa12.78□□□□□ -0.36
CCDC43-202ENST00000457422 LINC01559Q495D7 138 aa12.78□□□□□ -0.36
CCDC43-202ENST00000457422 ZNF705AQ6ZN79 300 aaPredicted RBP12.78□□□□□ -0.36
CCDC43-202ENST00000457422 CNFNQ9BYD5 112 aa12.78□□□□□ -0.36
CCDC43-202ENST00000457422 PPP1R14DQ9NXH3 145 aa12.78□□□□□ -0.36
CCDC43-202ENST00000457422 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.78□□□□□ -0.363e-9■■■□□ 18.1
CCDC43-202ENST00000457422 A0A1B0GV90 55 aa12.77□□□□□ -0.36
CCDC43-202ENST00000457422 LEPROTL1O95214 131 aa12.77□□□□□ -0.36
CCDC43-202ENST00000457422 SSTP61278 116 aa12.77□□□□□ -0.36
CCDC43-202ENST00000457422 BLCAPP62952 87 aa12.77□□□□□ -0.36
CCDC43-202ENST00000457422 Q6ZS46 218 aa12.77□□□□□ -0.36
CCDC43-202ENST00000457422 AGPAT4-IT1Q9H0P7 198 aa12.77□□□□□ -0.36
CCDC43-202ENST00000457422 ZMAT5Q9UDW3 170 aaKnown RBP12.77□□□□□ -0.36
CCDC43-202ENST00000457422 ZNF138P52744 262 aa12.77□□□□□ -0.37
CCDC43-202ENST00000457422 IL17RELQ6ZVW7 336 aa12.77□□□□□ -0.37
CCDC43-202ENST00000457422 BBC3Q96PG8 261 aaPredicted RBP12.77□□□□□ -0.37
CCDC43-202ENST00000457422 ZNF580Q9UK33 172 aa12.77□□□□□ -0.37
CCDC43-202ENST00000457422 ZFYVE26Q68DK2 2539 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 MAP1AP78559 2803 aaPredicted RBP12.76□□□□□ -0.37
CCDC43-202ENST00000457422 MUC21A0A0G2JKD1 596 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 MUC21A0A140T8X8 626 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 MUC21Q5SSG8 566 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 UNQ9165/PRO28630Q6UXU0 137 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 C9orf47Q6ZRZ4 202 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 C9orf139Q6ZV77 190 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 CRYBG3Q68DQ2 2970 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 IGLV1-40P01703 118 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 CSN3P07498 182 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 KLHDC1Q8N7A1 406 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 AP5S1Q9NUS5 200 aa12.76□□□□□ -0.37
CCDC43-202ENST00000457422 A0A096LNT2 108 aa12.75□□□□□ -0.37
CCDC43-202ENST00000457422 C20orf202A1L168 122 aa12.75□□□□□ -0.37
CCDC43-202ENST00000457422 IGHV3-11P01762 117 aa12.75□□□□□ -0.37
CCDC43-202ENST00000457422 ORM1P02763 201 aa12.75□□□□□ -0.37
CCDC43-202ENST00000457422 IGLC3P0DOY3 106 aa12.75□□□□□ -0.37
CCDC43-202ENST00000457422 HIST1H1AQ02539 215 aaPredicted RBP12.75□□□□□ -0.37
CCDC43-202ENST00000457422 TMEM78Q5T7P6 136 aa12.75□□□□□ -0.37
CCDC43-202ENST00000457422 SPATA12Q7Z6I5 190 aa12.75□□□□□ -0.37
CCDC43-202ENST00000457422 AMN1Q8IY45 258 aa12.75□□□□□ -0.37
CCDC43-202ENST00000457422 ATOH7Q8N100 152 aa12.75□□□□□ -0.37
CCDC43-202ENST00000457422 KLK15Q9H2R5 256 aa12.75□□□□□ -0.37
CCDC43-202ENST00000457422 UQCR10Q9UDW1 63 aa12.75□□□□□ -0.37
CCDC43-202ENST00000457422 TRAV9-2A0A087WT02 112 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 D6R8Y8 96 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 SYS1-DBNDD2H3BUS1 97 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 PF4V1P10720 104 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 CFHR3Q02985 330 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 LINC00173Q6ZV60 143 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 ORMDL3Q8N138 153 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 LINC01356Q8N9X3 169 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 SMAD7O15105 426 aaKnown RBP12.74□□□□□ -0.37
CCDC43-202ENST00000457422 MRPL51Q4U2R6 128 aaKnown RBP12.74□□□□□ -0.37
CCDC43-202ENST00000457422 LCNL1Q6ZST4 164 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 C16orf92Q96LL3 132 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 ZNF462Q96JM2 2506 aa12.74□□□□□ -0.37
CCDC43-202ENST00000457422 A0A0G2JLM5 398 aa12.73□□□□□ -0.37
CCDC43-202ENST00000457422 COX6B1P14854 86 aa12.73□□□□□ -0.37
CCDC43-202ENST00000457422 TWIST1Q15672 202 aa12.73□□□□□ -0.37
CCDC43-202ENST00000457422 LINC00469Q8N7U9 141 aa12.73□□□□□ -0.37
CCDC43-202ENST00000457422 PRELID3AQ96N28 172 aa12.73□□□□□ -0.37
CCDC43-202ENST00000457422 HSPB8Q9UJY1 196 aa12.73□□□□□ -0.37
CCDC43-202ENST00000457422 LENEPQ9Y5L5 61 aa12.73□□□□□ -0.37
CCDC43-202ENST00000457422 FA2HQ7L5A8 372 aa12.73□□□□□ -0.37
CCDC43-202ENST00000457422 PRSS3P2Q8NHM4 247 aa12.73□□□□□ -0.37
CCDC43-202ENST00000457422 J3QLI3 93 aa12.72□□□□□ -0.37
CCDC43-202ENST00000457422 MAJINQ3KP22 176 aa12.72□□□□□ -0.37
CCDC43-202ENST00000457422 GPHB5Q86YW7 130 aa12.72□□□□□ -0.37
CCDC43-202ENST00000457422 OR4X2Q8NGF9 303 aa12.72□□□□□ -0.37
CCDC43-202ENST00000457422 IGKV3D-20A0A0C4DH25 116 aa12.71□□□□□ -0.37
CCDC43-202ENST00000457422 A1L4Q6 167 aa12.71□□□□□ -0.37
CCDC43-202ENST00000457422 SOCS3O14543 225 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms