RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 SPXQ9BT56 116 aa9.94□□□□□ -0.82
SF3B4-202ENST00000457312 S100A14Q9HCY8 104 aa9.94□□□□□ -0.82
SF3B4-202ENST00000457312 COPZ2Q9P299 210 aa9.94□□□□□ -0.82
SF3B4-202ENST00000457312 CACFD1Q9UGQ2 172 aa9.94□□□□□ -0.82
SF3B4-202ENST00000457312 PSORS1C2Q9UIG4 136 aa9.94□□□□□ -0.82
SF3B4-202ENST00000457312 PXMP4Q9Y6I8 212 aa9.94□□□□□ -0.82
SF3B4-202ENST00000457312 PRSS46E5RG02 174 aa9.93□□□□□ -0.82
SF3B4-202ENST00000457312 B3GALNT1O75752 331 aa9.93□□□□□ -0.82
SF3B4-202ENST00000457312 SULT1A3P0DMM9 295 aa9.93□□□□□ -0.82
SF3B4-202ENST00000457312 SULT1A4P0DMN0 295 aa9.93□□□□□ -0.82
SF3B4-202ENST00000457312 POLR2GP62487 172 aaKnown RBP eCLIP9.93□□□□□ -0.82
SF3B4-202ENST00000457312 LHFPL1Q86WI0 220 aa9.93□□□□□ -0.82
SF3B4-202ENST00000457312 GLYATL2Q8WU03 294 aa9.93□□□□□ -0.82
SF3B4-202ENST00000457312 C1orf43Q9BWL3 253 aa9.93□□□□□ -0.82
SF3B4-202ENST00000457312 SCN3BQ9NY72 215 aa9.93□□□□□ -0.82
SF3B4-202ENST00000457312 HLA-DQA1P01909 254 aa9.92□□□□□ -0.82
SF3B4-202ENST00000457312 LINC00869P0C866 280 aa9.92□□□□□ -0.82
SF3B4-202ENST00000457312 CCDC71LQ8N9Z2 235 aa9.92□□□□□ -0.82
SF3B4-202ENST00000457312 SAT2Q96F10 170 aaPredicted RBP9.92□□□□□ -0.82
SF3B4-202ENST00000457312 TEX13DA0A0J9YY54 714 aaPredicted RBP9.91□□□□□ -0.82
SF3B4-202ENST00000457312 FBLL1A6NHQ2 334 aaKnown RBP9.91□□□□□ -0.82
SF3B4-202ENST00000457312 AKR1C1Q04828 323 aa9.91□□□□□ -0.82
SF3B4-202ENST00000457312 C4orf46Q504U0 113 aa9.91□□□□□ -0.82
SF3B4-202ENST00000457312 MUC21Q5SSG8 566 aa9.91□□□□□ -0.82
SF3B4-202ENST00000457312 PATE2Q6UY27 113 aa9.91□□□□□ -0.82
SF3B4-202ENST00000457312 CYP2G1PQ6ZSU1 146 aa9.91□□□□□ -0.82
SF3B4-202ENST00000457312 ZNF664Q8N3J9 261 aa9.91□□□□□ -0.82
SF3B4-202ENST00000457312 DUSP21Q9H596 190 aa9.91□□□□□ -0.82
SF3B4-202ENST00000457312 TXNL4BQ9NX01 149 aaKnown RBP9.91□□□□□ -0.82
SF3B4-202ENST00000457312 URGCP-MRPS24S4R325 110 aa9.91□□□□□ -0.82
SF3B4-202ENST00000457312 TRBV6-4A0A1B0GX49 114 aa9.9□□□□□ -0.82
SF3B4-202ENST00000457312 IL5P05113 134 aa9.9□□□□□ -0.82
SF3B4-202ENST00000457312 LINC00694P0DN24 101 aa9.9□□□□□ -0.82
SF3B4-202ENST00000457312 IGLC2P0DOY2 106 aa9.9□□□□□ -0.82
SF3B4-202ENST00000457312 TMEM268Q5VZI3 342 aa9.9□□□□□ -0.82
SF3B4-202ENST00000457312 Q8TAT8 98 aa9.9□□□□□ -0.82
SF3B4-202ENST00000457312 AGPAT4-IT1Q9H0P7 198 aa9.9□□□□□ -0.82
SF3B4-202ENST00000457312 IGHV3-64A0A075B6Q5 118 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 NMBP08949 121 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 PRSS3P35030 304 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 RAB11AP62491 216 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
SF3B4-202ENST00000457312 TMEM183BQ1AE95 376 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 TMEM183AQ8IXX5 376 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 PACRGLQ8N7B6 248 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 OR10G9Q8NGN4 311 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 GPX8Q8TED1 209 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 SRRQ9GZT4 340 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 SH3BGRL3Q9H299 93 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 C8orf4Q9NR00 106 aa9.89□□□□□ -0.83
SF3B4-202ENST00000457312 PAIP2BQ9ULR5 123 aaKnown RBP9.89□□□□□ -0.83
SF3B4-202ENST00000457312 MUC21A0A0G2JKD1 596 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 H3BQ15 152 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 M0R2P5 195 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 M0R3E3 92 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 ZNF253O75346 499 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 CACNG7P62955 275 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 Q0VG73 95 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 BAK1Q16611 211 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 PRR26Q8N8Z3 221 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 OR13C8Q8NGS7 320 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 OR52I2Q8NH67 350 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 ARV1Q9H2C2 271 aa9.88□□□□□ -0.83
SF3B4-202ENST00000457312 SDC2P34741 201 aa9.87□□□□□ -0.83
SF3B4-202ENST00000457312 MXD1Q05195 221 aa9.87□□□□□ -0.83
SF3B4-202ENST00000457312 PRSS48Q7RTY5 328 aa9.87□□□□□ -0.83
SF3B4-202ENST00000457312 BPIFA4PQ86YQ2 179 aa9.87□□□□□ -0.83
SF3B4-202ENST00000457312 ANKRD65E5RJM6 399 aa9.86□□□□□ -0.83
SF3B4-202ENST00000457312 IAPPP10997 89 aa9.86□□□□□ -0.83
SF3B4-202ENST00000457312 LINC01547P58512 204 aaPredicted RBP9.86□□□□□ -0.83
SF3B4-202ENST00000457312 UBE2MP61081 183 aaKnown RBP9.86□□□□□ -0.83
SF3B4-202ENST00000457312 RAB31Q13636 194 aa9.86□□□□□ -0.83
SF3B4-202ENST00000457312 S100A7AQ86SG5 101 aa9.86□□□□□ -0.83
SF3B4-202ENST00000457312 MRPL53Q96EL3 112 aaKnown RBP9.86□□□□□ -0.83
SF3B4-202ENST00000457312 ARL6Q9H0F7 186 aa9.86□□□□□ -0.83
SF3B4-202ENST00000457312 RNF24Q9Y225 148 aa9.86□□□□□ -0.83
SF3B4-202ENST00000457312 TPRKBQ9Y3C4 175 aa9.86□□□□□ -0.83
SF3B4-202ENST00000457312 TRGV11A0A075B6L2 103 aa9.85□□□□□ -0.83
SF3B4-202ENST00000457312 SMCO1Q147U7 214 aa9.85□□□□□ -0.83
SF3B4-202ENST00000457312 ENHOQ6UWT2 76 aa9.85□□□□□ -0.83
SF3B4-202ENST00000457312 LYPD6BQ8NI32 183 aa9.85□□□□□ -0.83
SF3B4-202ENST00000457312 S100A16Q96FQ6 103 aaKnown RBP9.85□□□□□ -0.83
SF3B4-202ENST00000457312 NAA60Q9H7X0 242 aa9.85□□□□□ -0.83
SF3B4-202ENST00000457312 A0A087WWC5 75 aa9.84□□□□□ -0.83
SF3B4-202ENST00000457312 IGHV3-73A0A0B4J1V6 119 aa9.84□□□□□ -0.83
SF3B4-202ENST00000457312 C5orf51A6NDU8 294 aa9.84□□□□□ -0.83
SF3B4-202ENST00000457312 CCR6P51684 374 aa9.84□□□□□ -0.83
SF3B4-202ENST00000457312 ELOBQ15370 118 aa9.84□□□□□ -0.83
SF3B4-202ENST00000457312 LINC00305Q7Z4B0 112 aa9.84□□□□□ -0.83
SF3B4-202ENST00000457312 CYB561D1Q8N8Q1 229 aa9.84□□□□□ -0.83
SF3B4-202ENST00000457312 ZFAND1Q8TCF1 268 aa9.84□□□□□ -0.83
SF3B4-202ENST00000457312 CHCHD7Q9BUK0 85 aa9.84□□□□□ -0.83
SF3B4-202ENST00000457312 ATP5HO75947 161 aa9.83□□□□□ -0.84
SF3B4-202ENST00000457312 GAGE12JA6NER3 117 aa9.82□□□□□ -0.84
SF3B4-202ENST00000457312 TNFAIP8O95379 198 aa9.82□□□□□ -0.84
SF3B4-202ENST00000457312 SELENOTP62341 195 aa9.82□□□□□ -0.84
SF3B4-202ENST00000457312 GAGE1Q13065 139 aa9.82□□□□□ -0.84
SF3B4-202ENST00000457312 GAGE4Q13068 117 aa9.82□□□□□ -0.84
SF3B4-202ENST00000457312 GAGE5Q13069 117 aa9.82□□□□□ -0.84
SF3B4-202ENST00000457312 GAGE13Q4V321 117 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms