RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 SPART-AS1P0CW21 52 aa8.9□□□□□ -0.98
C9orf139-201ENST00000457302 RBMY1A1P0DJD3 496 aaKnown RBP8.9□□□□□ -0.98
C9orf139-201ENST00000457302 RBMY1CP0DJD4 496 aa8.9□□□□□ -0.98
C9orf139-201ENST00000457302 RAB5CP51148 216 aa8.9□□□□□ -0.98
C9orf139-201ENST00000457302 EMP1P54849 157 aa8.9□□□□□ -0.98
C9orf139-201ENST00000457302 RBMY1FQ15415 496 aaKnown RBP8.9□□□□□ -0.98
C9orf139-201ENST00000457302 TMED6Q8WW62 240 aa8.9□□□□□ -0.98
C9orf139-201ENST00000457302 RAB24Q969Q5 203 aa8.9□□□□□ -0.98
C9orf139-201ENST00000457302 C20orf144Q9BQM9 153 aa8.9□□□□□ -0.98
C9orf139-201ENST00000457302 Q9H3A6 140 aa8.9□□□□□ -0.98
C9orf139-201ENST00000457302 TEX48A0A1B0GUV7 120 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 UMAD1C9J7I0 102 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 C11orf94C9JXX5 98 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 NPIPB6E9PJ23 425 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 CXorf1O96002 111 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 STAG3L2P0CL84 134 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 STAG3L3P0CL85 134 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 PRB4P10163 310 aaPredicted RBP8.89□□□□□ -0.99
C9orf139-201ENST00000457302 HTN1P15515 57 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 NANOS2P60321 138 aaKnown RBP8.89□□□□□ -0.99
C9orf139-201ENST00000457302 RAB14P61106 215 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 CEMP1Q6PRD7 247 aaPredicted RBP8.89□□□□□ -0.99
C9orf139-201ENST00000457302 CCDC28AQ8IWP9 274 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 IQCF2Q8IXL9 164 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 C1orf158Q8N1D5 194 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 PHLDA1Q8WV24 401 aaPredicted RBP8.89□□□□□ -0.99
C9orf139-201ENST00000457302 ODF3Q96PU9 254 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 SH3BGRL3Q9H299 93 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 OTORQ9NRC9 128 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 TMEM167BQ9NRX6 74 aa8.89□□□□□ -0.99
C9orf139-201ENST00000457302 LOC102723971A0A1B0GUV8 181 aa8.88□□□□□ -0.99
C9orf139-201ENST00000457302 H7BYZ3 331 aa8.88□□□□□ -0.99
C9orf139-201ENST00000457302 J3KRW8 73 aa8.88□□□□□ -0.99
C9orf139-201ENST00000457302 CRXO43186 299 aaPredicted RBP8.88□□□□□ -0.99
C9orf139-201ENST00000457302 SLC25A5P05141 298 aaKnown RBP8.88□□□□□ -0.99
C9orf139-201ENST00000457302 GPX1P07203 203 aa8.88□□□□□ -0.99
C9orf139-201ENST00000457302 CT45A10P0DMU9 189 aa8.88□□□□□ -0.99
C9orf139-201ENST00000457302 ERCC8Q13216 396 aa8.88□□□□□ -0.99
C9orf139-201ENST00000457302 ZNF503Q96F45 646 aa8.88□□□□□ -0.99
C9orf139-201ENST00000457302 NIPSNAP3BQ9BS92 247 aa8.88□□□□□ -0.99
C9orf139-201ENST00000457302 AGPAT4-IT1Q9H0P7 198 aa8.88□□□□□ -0.99
C9orf139-201ENST00000457302 CTXND1A0A1B0GTU2 59 aa8.87□□□□□ -0.99
C9orf139-201ENST00000457302 ZNF705GA8MUZ8 300 aaPredicted RBP8.87□□□□□ -0.99
C9orf139-201ENST00000457302 K7EQM0 130 aa8.87□□□□□ -0.99
C9orf139-201ENST00000457302 EIF3GO75821 320 aaKnown RBP eCLIP8.87□□□□□ -0.99
C9orf139-201ENST00000457302 ARL14EPLP0DKL9 152 aa8.87□□□□□ -0.99
C9orf139-201ENST00000457302 TAS2R60P59551 318 aa8.87□□□□□ -0.99
C9orf139-201ENST00000457302 BLOC1S1P78537 153 aa8.87□□□□□ -0.99
C9orf139-201ENST00000457302 DPPA3Q6W0C5 159 aa8.87□□□□□ -0.99
C9orf139-201ENST00000457302 C9orf47Q6ZRZ4 202 aa8.87□□□□□ -0.99
C9orf139-201ENST00000457302 EIF4E3Q8N5X7 224 aaKnown RBP8.87□□□□□ -0.99
C9orf139-201ENST00000457302 ARL6IP6Q8N6S5 226 aa8.87□□□□□ -0.99
C9orf139-201ENST00000457302 RPH3ALQ9UNE2 315 aa8.87□□□□□ -0.99
C9orf139-201ENST00000457302 DNAH7Q8WXX0 4024 aa8.87□□□□□ -0.99
C9orf139-201ENST00000457302 TRAV10A0A0B4J240 114 aa8.86□□□□□ -0.99
C9orf139-201ENST00000457302 RBAKDNA6NC62 111 aa8.86□□□□□ -0.99
C9orf139-201ENST00000457302 GCHFRP30047 84 aa8.86□□□□□ -0.99
C9orf139-201ENST00000457302 ZNF138P52744 262 aa8.86□□□□□ -0.99
C9orf139-201ENST00000457302 ZNF493Q6ZR52 646 aa8.86□□□□□ -0.99
C9orf139-201ENST00000457302 SLC7A5P1Q8MH63 180 aa8.86□□□□□ -0.99
C9orf139-201ENST00000457302 C2CD4CQ8TF44 421 aa8.86□□□□□ -0.99
C9orf139-201ENST00000457302 ZNF492Q9P255 531 aa8.86□□□□□ -0.99
C9orf139-201ENST00000457302 TENM2Q9NT68 2774 aa8.85□□□□□ -0.99
C9orf139-201ENST00000457302 IGKV2-40A0A087WW87 121 aaPredicted RBP8.85□□□□□ -0.99
C9orf139-201ENST00000457302 TRAV1-1A0A0B4J248 108 aa8.85□□□□□ -0.99
C9orf139-201ENST00000457302 TRAV12-3A0A0B4J271 114 aa8.85□□□□□ -0.99
C9orf139-201ENST00000457302 DIRC3C9JPN6 131 aa8.85□□□□□ -0.99
C9orf139-201ENST00000457302 IGKV2D-40P01614 121 aaPredicted RBP8.85□□□□□ -0.99
C9orf139-201ENST00000457302 RNASE4P34096 147 aaKnown RBP8.85□□□□□ -0.99
C9orf139-201ENST00000457302 GFI1BQ5VTD9 330 aa8.85□□□□□ -0.99
C9orf139-201ENST00000457302 VGLL1Q99990 258 aa8.85□□□□□ -0.99
C9orf139-201ENST00000457302 YTHDF2Q9Y5A9 579 aaKnown RBP8.85□□□□□ -0.99
C9orf139-201ENST00000457302 TRBV7-9A0A0J9YWB2 115 aa8.84□□□□□ -0.99
C9orf139-201ENST00000457302 SERTM2A0A1B0GWG4 89 aa8.84□□□□□ -0.99
C9orf139-201ENST00000457302 C7orf71A4D174 169 aa8.84□□□□□ -0.99
C9orf139-201ENST00000457302 FAM222AQ5U5X8 452 aa8.84□□□□□ -0.99
C9orf139-201ENST00000457302 MBD3L1Q8WWY6 194 aa8.84□□□□□ -0.99
C9orf139-201ENST00000457302 C16orf74Q96GX8 76 aa8.84□□□□□ -0.99
C9orf139-201ENST00000457302 PYGO2Q9BRQ0 406 aa8.84□□□□□ -0.99
C9orf139-201ENST00000457302 NKX6-2Q9C056 277 aaPredicted RBP8.84□□□□□ -0.99
C9orf139-201ENST00000457302 LENEPQ9Y5L5 61 aa8.84□□□□□ -0.99
C9orf139-201ENST00000457302 LYRM9A8MSI8 78 aa8.83□□□□□ -1
C9orf139-201ENST00000457302 SNURFLB1AK76 121 aa8.83□□□□□ -1
C9orf139-201ENST00000457302 TCTAP57738 103 aa8.83□□□□□ -1
C9orf139-201ENST00000457302 DAD1P61803 113 aa8.83□□□□□ -1
C9orf139-201ENST00000457302 SUMO1P63165 101 aaKnown RBP8.83□□□□□ -1
C9orf139-201ENST00000457302 C12orf74Q32Q52 190 aa8.83□□□□□ -1
C9orf139-201ENST00000457302 GOLT1AQ6ZVE7 132 aa8.83□□□□□ -1
C9orf139-201ENST00000457302 C5orf17Q8NAS9 161 aa8.83□□□□□ -1
C9orf139-201ENST00000457302 NDFIP1Q9BT67 221 aa8.83□□□□□ -1
C9orf139-201ENST00000457302 DKK2Q9UBU2 259 aa8.83□□□□□ -1
C9orf139-201ENST00000457302 TIMM8BQ9Y5J9 83 aaPredicted RBP8.83□□□□□ -1
C9orf139-201ENST00000457302 DEFB131BA0A096LNP1 70 aa8.82□□□□□ -1
C9orf139-201ENST00000457302 A0A1W2PRE2 83 aa8.82□□□□□ -1
C9orf139-201ENST00000457302 RAB19A4D1S5 217 aa8.82□□□□□ -1
C9orf139-201ENST00000457302 IGLL5B9A064 214 aa8.82□□□□□ -1
C9orf139-201ENST00000457302 ATP6V1G1O75348 118 aa8.82□□□□□ -1
C9orf139-201ENST00000457302 CRISP2P16562 243 aa8.82□□□□□ -1
C9orf139-201ENST00000457302 AZU1P20160 251 aa8.82□□□□□ -1
C9orf139-201ENST00000457302 KIR3DS1Q14943 382 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms