RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 JMJD8Q96S16 334 aa9.68□□□□□ -0.86
LINC00959-201ENST00000456581 ZNF747Q9BV97 191 aa9.68□□□□□ -0.86
LINC00959-201ENST00000456581 C5orf64Q2M2E5 130 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 RNF125Q96EQ8 232 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 SMIM12Q96EX1 92 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 AJUBAQ96IF1 538 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 SHANK2-AS3Q9BTD1 123 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 AGRNO00468 2067 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 NBPF19A0A087WUL8 3843 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 FA2HQ7L5A8 372 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 BPIFA4PQ86YQ2 179 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 CCDC168Q8NDH2 2452 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 RAB37Q96AX2 223 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 MSRB1Q9NZV6 116 aa9.67□□□□□ -0.86
LINC00959-201ENST00000456581 RIPPLY3P57055 190 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 PSG3Q16557 428 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 ZNF414Q96IQ9 312 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 SIGLEC8Q9NYZ4 499 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 C1RLQ9NZP8 487 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 TRAV30A0A087WSZ9 112 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 H3BRN7 92 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 NDUFA3O95167 84 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 SAA4P35542 130 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 ZNF80P51504 273 aaPredicted RBP9.66□□□□□ -0.86
LINC00959-201ENST00000456581 RHOGP84095 191 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 OCIAD2Q56VL3 154 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 LINC01545Q5VT33 79 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 C16orf54Q6UWD8 224 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 PCP2Q8IVA1 136 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 SOX21Q9Y651 276 aaPredicted RBP9.66□□□□□ -0.86
LINC00959-201ENST00000456581 MXRA5Q9NR99 2828 aa9.66□□□□□ -0.86
LINC00959-201ENST00000456581 IGHV4-61A0A0C4DH41 118 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 FAM231BA6NCW3 169 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 PPIFP30405 207 aaKnown RBP9.65□□□□□ -0.86
LINC00959-201ENST00000456581 GPR183P32249 361 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 NPBQ8NG41 125 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 TMEM14CQ9P0S9 112 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 CREBBPQ92793 2442 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 IGHV3OR16-13A0A075B7E8 117 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 IGHV3-74A0A0B4J1X5 117 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 MRPS12O15235 138 aaKnown RBP9.65□□□□□ -0.86
LINC00959-201ENST00000456581 CACNG7P62955 275 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 PET117Q6UWS5 81 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 C18orf15Q96N68 181 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 HSPB8Q9UJY1 196 aa9.65□□□□□ -0.86
LINC00959-201ENST00000456581 TEX15Q9BXT5 2789 aa9.65□□□□□ -0.87
LINC00959-201ENST00000456581 GAGE12BA1L429 117 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 NPIPB5A8MRT5 1133 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 SH2D1AO60880 128 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 TMEM11P17152 192 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 C1orf122Q6ZSJ8 110 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 VGLL1Q99990 258 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 RABAC1Q9UI14 185 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 IGHV3-66A0A0C4DH42 116 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 C7orf71A4D174 169 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 LINC01548A6NM66 108 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 GNG7O60262 68 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 FGF6P10767 208 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 RIGQ13278 110 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 CCDC144NLQ6NUI1 221 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 BRD3OSQ6XYD6 125 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 FANCD2OSQ96PS1 177 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 PPBPP02775 128 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 GATA1P15976 413 aaPredicted RBP9.64□□□□□ -0.87
LINC00959-201ENST00000456581 CCL19Q99731 98 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 DKK2Q9UBU2 259 aa9.64□□□□□ -0.87
LINC00959-201ENST00000456581 SONP18583 2426 aaKnown RBP9.63□□□□□ -0.87
LINC00959-201ENST00000456581 F8W735 103 aaPredicted RBP9.63□□□□□ -0.87
LINC00959-201ENST00000456581 ZNF207O43670 478 aaKnown RBP9.63□□□□□ -0.87
LINC00959-201ENST00000456581 NPYP01303 97 aa9.63□□□□□ -0.87
LINC00959-201ENST00000456581 EGR2P11161 476 aaPredicted RBP9.63□□□□□ -0.87
LINC00959-201ENST00000456581 Q6ZQT7 251 aa9.63□□□□□ -0.87
LINC00959-201ENST00000456581 ZNF575Q86XF7 245 aa9.63□□□□□ -0.87
LINC00959-201ENST00000456581 Q8N6K4 173 aa9.63□□□□□ -0.87
LINC00959-201ENST00000456581 ARPC1AQ92747 370 aa9.63□□□□□ -0.87
LINC00959-201ENST00000456581 PRELID3AQ96N28 172 aa9.63□□□□□ -0.87
LINC00959-201ENST00000456581 MRPL51Q4U2R6 128 aaKnown RBP9.63□□□□□ -0.87
LINC00959-201ENST00000456581 ZNF562Q6V9R5 426 aa9.63□□□□□ -0.87
LINC00959-201ENST00000456581 TMEM219Q86XT9 240 aa9.63□□□□□ -0.87
LINC00959-201ENST00000456581 OR10AG1Q8NH19 301 aa9.63□□□□□ -0.87
LINC00959-201ENST00000456581 TMEM189A5PLL7 270 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 H3BUT2 72 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 COX8AP10176 69 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 ERCC8Q13216 396 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 FAM162BQ5T6X4 162 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 THYN1Q9P016 225 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 IGHV4-30-2A0A087WSY4 118 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 IGHV7-81A0A0B4J1V7 117 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 CENPVL3A0A0U1RRI6 287 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 A1L4Q6 167 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 CT45A10P0DMU9 189 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 EVI2AP22794 236 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 UBE2E1P51965 193 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 ATP5J2P56134 94 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 TWIST1Q15672 202 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 RNF182Q8N6D2 247 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 Q8N9W7 124 aa9.62□□□□□ -0.87
LINC00959-201ENST00000456581 IGHV3-49A0A0A0MS15 119 aa9.61□□□□□ -0.87
LINC00959-201ENST00000456581 HIST1H1AQ02539 215 aaPredicted RBP9.61□□□□□ -0.87
LINC00959-201ENST00000456581 SRSF8Q9BRL6 282 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms