RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 FAM201AQ5SY85 155 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 DUX3Q96PT4 197 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 NDUFA12Q9UI09 145 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 DOCK8Q8NF50 2099 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 IGHV3-35A0A0C4DH35 117 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 FAM236AA0A1B0GUQ0 79 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 FAM236BA0A1B0GV22 79 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 F8WDY8 70 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 GATA4P43694 442 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 NPC2P61916 151 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 TMEM200BQ69YZ2 307 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 GATD1Q8NB37 220 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 MBD6Q96DN6 1003 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 ATG2BQ96BY7 2078 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 C19orf71A6NCJ1 209 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 I3L3M4 83 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 IGKV1-16P04430 117 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 ATP5J2P56134 94 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 LINC00158P58513 81 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 PRR31Q5SQ13 230 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 DTX1Q86Y01 620 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 C8orf49Q96NF6 230 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 TOMM7Q9P0U1 55 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 CACNA1GO43497 2377 aa3.99□□□□□ -1.77
PCDH9-203ENST00000456367 IGHV3-64A0A075B6Q5 118 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 KNCNA6PVL3 124 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 RHODO00212 210 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 ZNF883P0CG24 379 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 CD59P13987 128 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 MORN5Q5VZ52 161 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 PRIMA1Q86XR5 153 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 RNF138Q8WVD3 245 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 IGFBPL1Q8WX77 278 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 FAM167A-AS1Q96KT0 104 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 PRSS22Q9GZN4 317 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 PEMTQ9UBM1 199 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 TNS1Q9HBL0 1735 aaKnown RBP3.98□□□□□ -1.77
PCDH9-203ENST00000456367 IGHV3OR16-13A0A075B7E8 117 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 IGHV3-74A0A0B4J1X5 117 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 ADARB2-AS1A8MUL3 147 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 IGHV3-23P01764 117 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 UFSP1Q6NVU6 142 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 LRRC75A-AS1Q8N1F1 130 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 Q8TCH9 128 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 LAMTOR3Q9UHA4 124 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 S4R3C0 116 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 IGHV3-66A0A0C4DH42 116 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 MT-ATP8P03928 68 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 P0C879 139 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 MAFAQ8NHW3 353 aaPredicted RBP3.98□□□□□ -1.77
PCDH9-203ENST00000456367 FAM90A27PA6NNH2 459 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 H3BQ85 93 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 PAX4O43316 350 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 GP9P14770 177 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 LINC00205P59089 165 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 WT1-ASQ06250 92 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 TRIP6Q15654 476 aaKnown RBP3.98□□□□□ -1.77
PCDH9-203ENST00000456367 ANXA2RQ3ZCQ2 193 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 ODF3L1Q8IXM7 274 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 ALPK3Q96L96 1907 aa3.98□□□□□ -1.77
PCDH9-203ENST00000456367 H0YGX0 51 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 FOXG1P55316 489 aaPredicted RBP3.97□□□□□ -1.77
PCDH9-203ENST00000456367 IGHV3-49A0A0A0MS15 119 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 TRAV13-1A0A0B4J241 112 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 FAM223BA6NKX1 122 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 BUB1B-PAK6H3BSN5 160 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 M0R1W7 72 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 FAM223AQ8IWN6 122 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 C9orf106Q8NAJ2 232 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 TNRC6AQ8NDV7 1962 aaKnown RBP3.97□□□□□ -1.77
PCDH9-203ENST00000456367 PTH2Q96A98 100 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 MGAMO43451 1857 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 WDR90Q96KV7 1748 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 SDHAF1A6NFY7 115 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 TMEM178BH3BS89 294 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 TFF1P04155 84 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 BAALC-AS2P0C853 105 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 EFNA4P52798 201 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 RPL36AP83881 106 aaKnown RBP3.97□□□□□ -1.77
PCDH9-203ENST00000456367 RBM3P98179 157 aaKnown RBP3.97□□□□□ -1.77
PCDH9-203ENST00000456367 C17orf58Q2M2W7 97 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 C15orf32Q32M92 178 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 C3orf22Q8N5N4 141 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 RPL36ALQ969Q0 106 aaKnown RBP3.97□□□□□ -1.77
PCDH9-203ENST00000456367 ZNF524Q96C55 264 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 ICOSQ9Y6W8 199 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 SRRM4A7MD48 611 aaKnown RBP3.97□□□□□ -1.77
PCDH9-203ENST00000456367 IGLV2-8P01709 118 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 USMG5Q96IX5 58 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 TMEM243Q9BU79 118 aa3.97□□□□□ -1.77
PCDH9-203ENST00000456367 A0A1B0GX51 115 aa3.96□□□□□ -1.77
PCDH9-203ENST00000456367 hADV29S1A0JD25 119 aa3.96□□□□□ -1.77
PCDH9-203ENST00000456367 C11orf86A6NJI1 115 aa3.96□□□□□ -1.77
PCDH9-203ENST00000456367 NDUFA11Q86Y39 141 aa3.96□□□□□ -1.77
PCDH9-203ENST00000456367 ZNF784Q8NCA9 323 aaPredicted RBP3.96□□□□□ -1.77
PCDH9-203ENST00000456367 VWA8A3KMH1 1905 aa3.96□□□□□ -1.77
PCDH9-203ENST00000456367 MED14OSP0DP75 135 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 SEC61GP60059 68 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 ERCC8Q13216 396 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 TIMM17AQ99595 171 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms