RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.14□□□□□ -0.47
TMEM220-202ENST00000455996 PRR25Q96S07 402 aa12.14□□□□□ -0.47
TMEM220-202ENST00000455996 PYGO2Q9BRQ0 406 aa12.14□□□□□ -0.47
TMEM220-202ENST00000455996 RNASE7Q9H1E1 156 aaKnown RBP12.14□□□□□ -0.47
TMEM220-202ENST00000455996 TRBV24-1A0A075B6N3 115 aa12.13□□□□□ -0.47
TMEM220-202ENST00000455996 LINC00322Q6ZN03 302 aaPredicted RBP12.13□□□□□ -0.47
TMEM220-202ENST00000455996 ZNF738Q8NE65 137 aa12.13□□□□□ -0.47
TMEM220-202ENST00000455996 NUDT10Q8NFP7 164 aa12.13□□□□□ -0.47
TMEM220-202ENST00000455996 NUDT11Q96G61 164 aa12.13□□□□□ -0.47
TMEM220-202ENST00000455996 ZC2HC1AQ96GY0 325 aa12.13□□□□□ -0.47
TMEM220-202ENST00000455996 AGPAT4-IT1Q9H0P7 198 aa12.13□□□□□ -0.47
TMEM220-202ENST00000455996 IL36BQ9NZH7 164 aa12.13□□□□□ -0.47
TMEM220-202ENST00000455996 IGKV3-7A0A075B6H7 116 aa12.12□□□□□ -0.47
TMEM220-202ENST00000455996 NPIPB6E9PJ23 425 aa12.12□□□□□ -0.47
TMEM220-202ENST00000455996 PRB4P10163 310 aaPredicted RBP12.12□□□□□ -0.47
TMEM220-202ENST00000455996 S100PP25815 95 aa12.12□□□□□ -0.47
TMEM220-202ENST00000455996 ERCC8Q13216 396 aa12.12□□□□□ -0.47
TMEM220-202ENST00000455996 DEFB114Q30KQ6 69 aa12.12□□□□□ -0.47
TMEM220-202ENST00000455996 LENEPQ9Y5L5 61 aa12.12□□□□□ -0.47
TMEM220-202ENST00000455996 TRAV9-1A0A075B6T8 112 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 TRAV25A0A0B4J276 109 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 ZNF138P52744 262 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 PAFAH1B2P68402 229 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 CT83Q5H943 113 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 KCNIP4Q6PIL6 250 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 GBGT1Q8N5D6 347 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 LINC00477Q96M19 166 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 SELENOKQ9Y6D0 94 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 URGCP-MRPS24S4R325 110 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 GATCO43716 136 aaKnown RBP12.11□□□□□ -0.47
TMEM220-202ENST00000455996 CXCL1P09341 107 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 CRIP1P50238 77 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 NSUN5P1Q3KNT7 163 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 TMEM78Q5T7P6 136 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 PRR27Q6MZM9 219 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 OR4B1Q8NGF8 309 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 OR8A1Q8NGG7 326 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 OR10J6PQ8NGY7 276 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 Q8TAT8 98 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 C8orf49Q96NF6 230 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 NDFIP1Q9BT67 221 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 GPR61Q9BZJ8 451 aa12.11□□□□□ -0.47
TMEM220-202ENST00000455996 TGIF2-C20orf24A0A0A6YYL0 155 aa12.1□□□□□ -0.47
TMEM220-202ENST00000455996 TRBV7-9A0A0J9YWB2 115 aa12.1□□□□□ -0.47
TMEM220-202ENST00000455996 SMIM27A0A1W2PRY6 76 aa12.1□□□□□ -0.47
TMEM220-202ENST00000455996 ZNF705GA8MUZ8 300 aaPredicted RBP12.1□□□□□ -0.47
TMEM220-202ENST00000455996 RAB5AP20339 215 aa12.1□□□□□ -0.47
TMEM220-202ENST00000455996 SNRPD3P62318 126 aaKnown RBP12.1□□□□□ -0.47
TMEM220-202ENST00000455996 WFDC3Q8IUB2 231 aa12.1□□□□□ -0.47
TMEM220-202ENST00000455996 TMEM61Q8N0U2 210 aa12.1□□□□□ -0.47
TMEM220-202ENST00000455996 DYNLRB2Q8TF09 96 aa12.1□□□□□ -0.47
TMEM220-202ENST00000455996 ASCL2Q99929 193 aa12.1□□□□□ -0.47
TMEM220-202ENST00000455996 CITED1Q99966 193 aa12.1□□□□□ -0.47
TMEM220-202ENST00000455996 P01737 135 aa12.09□□□□□ -0.47
TMEM220-202ENST00000455996 SMUG1Q53HV7 270 aa12.09□□□□□ -0.47
TMEM220-202ENST00000455996 BTF3L4Q96K17 158 aa12.09□□□□□ -0.47
TMEM220-202ENST00000455996 FAM210BQ96KR6 192 aa12.09□□□□□ -0.47
TMEM220-202ENST00000455996 FAM19A4Q96LR4 140 aa12.09□□□□□ -0.47
TMEM220-202ENST00000455996 RPP21Q9H633 154 aaKnown RBP12.09□□□□□ -0.47
TMEM220-202ENST00000455996 TYMSP04818 313 aa12.08□□□□□ -0.48
TMEM220-202ENST00000455996 CT45A10P0DMU9 189 aa12.08□□□□□ -0.48
TMEM220-202ENST00000455996 RBPMS2Q6ZRY4 209 aaKnown RBP12.08□□□□□ -0.48
TMEM220-202ENST00000455996 TSKUQ8WUA8 353 aa12.08□□□□□ -0.48
TMEM220-202ENST00000455996 DAZAP1Q96EP5 407 aaKnown RBP12.08□□□□□ -0.48
TMEM220-202ENST00000455996 ZNF688P0C7X2 276 aa12.07□□□□□ -0.48
TMEM220-202ENST00000455996 TFPI2P48307 235 aa12.07□□□□□ -0.48
TMEM220-202ENST00000455996 FAM3BP58499 235 aaPredicted RBP12.07□□□□□ -0.48
TMEM220-202ENST00000455996 CD300EQ496F6 205 aaPredicted RBP12.07□□□□□ -0.48
TMEM220-202ENST00000455996 FAM162BQ5T6X4 162 aa12.07□□□□□ -0.48
TMEM220-202ENST00000455996 SPAG8Q99932 426 aaPredicted RBP12.07□□□□□ -0.48
TMEM220-202ENST00000455996 JMJD1CQ15652 2540 aa12.06□□□□□ -0.48
TMEM220-202ENST00000455996 FAM231BA6NCW3 169 aa12.06□□□□□ -0.48
TMEM220-202ENST00000455996 ZNF80P51504 273 aaPredicted RBP12.06□□□□□ -0.48
TMEM220-202ENST00000455996 PSMG4Q5JS54 123 aa12.06□□□□□ -0.48
TMEM220-202ENST00000455996 APRG1Q8IVJ8 170 aa12.06□□□□□ -0.48
TMEM220-202ENST00000455996 LINC00482Q8N8I6 264 aa12.06□□□□□ -0.48
TMEM220-202ENST00000455996 A0A0J9YX75 114 aa12.05□□□□□ -0.48
TMEM220-202ENST00000455996 A0A1W2PPQ1 181 aa12.05□□□□□ -0.48
TMEM220-202ENST00000455996 A8MWL6 223 aa12.05□□□□□ -0.48
TMEM220-202ENST00000455996 F6UB75 175 aa12.05□□□□□ -0.48
TMEM220-202ENST00000455996 SH2D1AO60880 128 aa12.05□□□□□ -0.48
TMEM220-202ENST00000455996 ZNF705DP0CH99 300 aaPredicted RBP12.05□□□□□ -0.48
TMEM220-202ENST00000455996 ZNF705BP0CI00 300 aaPredicted RBP12.05□□□□□ -0.48
TMEM220-202ENST00000455996 CRISP2P16562 243 aa12.05□□□□□ -0.48
TMEM220-202ENST00000455996 DEFB1P60022 68 aa12.05□□□□□ -0.48
TMEM220-202ENST00000455996 HIST1H1AQ02539 215 aaPredicted RBP12.05□□□□□ -0.48
TMEM220-202ENST00000455996 OR2K2Q8NGT1 345 aa12.05□□□□□ -0.48
TMEM220-202ENST00000455996 ODF3Q96PU9 254 aa12.05□□□□□ -0.48
TMEM220-202ENST00000455996 GFRA4Q9GZZ7 299 aa12.05□□□□□ -0.48
TMEM220-202ENST00000455996 ZNF256Q9Y2P7 627 aaPredicted RBP12.05□□□□□ -0.48
TMEM220-202ENST00000455996 OR4C46A6NHA9 309 aa12.04□□□□□ -0.48
TMEM220-202ENST00000455996 CA1P00915 261 aaPredicted RBP12.04□□□□□ -0.48
TMEM220-202ENST00000455996 FOXI2Q6ZQN5 318 aa12.04□□□□□ -0.48
TMEM220-202ENST00000455996 ZFAND2AQ8N6M9 145 aa12.04□□□□□ -0.48
TMEM220-202ENST00000455996 SRD5A3Q9H8P0 318 aa12.04□□□□□ -0.48
TMEM220-202ENST00000455996 FABP5P3A8MUU1 101 aa12.03□□□□□ -0.48
TMEM220-202ENST00000455996 IGLV1-51P01701 117 aa12.03□□□□□ -0.48
TMEM220-202ENST00000455996 FOXA3P55318 350 aaPredicted RBP12.03□□□□□ -0.48
TMEM220-202ENST00000455996 KRTAP24-1Q3LI83 254 aa12.03□□□□□ -0.48
TMEM220-202ENST00000455996 OR2D3Q8NGH3 330 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms