RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 NAP1L6A6NFF2 107 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 MPDU1O75352 247 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 NDUFB4O95168 129 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 IFNA5P01569 189 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 NMBP08949 121 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 SLAQ13239 276 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 FHL2Q14192 279 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 ICAM4Q14773 271 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 MIC13Q5XKP0 118 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 VGLL1Q99990 258 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 SRRQ9GZT4 340 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 GSKIPQ9P0R6 139 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 WDR83OSQ9Y284 106 aa12.66□□□□□ -0.38
MSH6-206ENST00000455383 FLG2Q5D862 2391 aaPredicted RBP12.66□□□□□ -0.38
MSH6-206ENST00000455383 TRAV9-2A0A087WT02 112 aa12.65□□□□□ -0.38
MSH6-206ENST00000455383 K7EP13 123 aa12.65□□□□□ -0.38
MSH6-206ENST00000455383 IGHV3-53P01767 116 aa12.65□□□□□ -0.38
MSH6-206ENST00000455383 RNASE4P34096 147 aaKnown RBP12.65□□□□□ -0.38
MSH6-206ENST00000455383 RAB31Q13636 194 aa12.65□□□□□ -0.38
MSH6-206ENST00000455383 MRPL23Q16540 153 aaKnown RBP12.65□□□□□ -0.38
MSH6-206ENST00000455383 C9orf47Q6ZRZ4 202 aa12.65□□□□□ -0.38
MSH6-206ENST00000455383 MITD1Q8WV92 249 aa12.65□□□□□ -0.38
MSH6-206ENST00000455383 PFDN5Q99471 154 aa12.65□□□□□ -0.38
MSH6-206ENST00000455383 TMEM14CQ9P0S9 112 aa12.65□□□□□ -0.38
MSH6-206ENST00000455383 TP53TG3Q9ULZ0 132 aa12.65□□□□□ -0.38
MSH6-206ENST00000455383 HHLA3Q9XRX5 114 aa12.65□□□□□ -0.38
MSH6-206ENST00000455383 PRELID1Q9Y255 219 aa12.65□□□□□ -0.38
MSH6-206ENST00000455383 S100A5P33763 92 aa12.64□□□□□ -0.39
MSH6-206ENST00000455383 VWC2Q2TAL6 325 aa12.64□□□□□ -0.39
MSH6-206ENST00000455383 NEGR1Q7Z3B1 354 aa12.64□□□□□ -0.39
MSH6-206ENST00000455383 ZFAND2AQ8N6M9 145 aa12.64□□□□□ -0.39
MSH6-206ENST00000455383 C11orf1Q9H5F2 150 aa12.64□□□□□ -0.39
MSH6-206ENST00000455383 MRPL16Q9NX20 251 aaKnown RBP12.64□□□□□ -0.39
MSH6-206ENST00000455383 LY96Q9Y6Y9 160 aa12.64□□□□□ -0.39
MSH6-206ENST00000455383 PRAF2O60831 178 aa12.63□□□□□ -0.39
MSH6-206ENST00000455383 HIST1H1EP10412 219 aaKnown RBP12.63□□□□□ -0.39
MSH6-206ENST00000455383 GCSHP23434 173 aa12.63□□□□□ -0.39
MSH6-206ENST00000455383 BTCP35070 178 aa12.63□□□□□ -0.39
MSH6-206ENST00000455383 RPL29P47914 159 aaKnown RBP12.63□□□□□ -0.39
MSH6-206ENST00000455383 PDE6HQ13956 83 aa12.63□□□□□ -0.39
MSH6-206ENST00000455383 BAK1Q16611 211 aa12.63□□□□□ -0.39
MSH6-206ENST00000455383 C12orf45Q8N5I9 185 aaPredicted RBP12.63□□□□□ -0.39
MSH6-206ENST00000455383 CHAC2Q8WUX2 184 aa12.63□□□□□ -0.39
MSH6-206ENST00000455383 C8orf49Q96NF6 230 aa12.63□□□□□ -0.39
MSH6-206ENST00000455383 MSRB1Q9NZV6 116 aa12.63□□□□□ -0.39
MSH6-206ENST00000455383 MDFICQ9P1T7 246 aa12.63□□□□□ -0.39
MSH6-206ENST00000455383 SMR3BP02814 79 aaPredicted RBP12.62□□□□□ -0.39
MSH6-206ENST00000455383 GPX1P07203 203 aa12.62□□□□□ -0.39
MSH6-206ENST00000455383 PRR9Q5T870 116 aa12.62□□□□□ -0.39
MSH6-206ENST00000455383 Q6ZQT7 251 aa12.62□□□□□ -0.39
MSH6-206ENST00000455383 MRPL32Q9BYC8 188 aaKnown RBP12.62□□□□□ -0.39
MSH6-206ENST00000455383 SLC39A9Q9NUM3 307 aa12.62□□□□□ -0.39
MSH6-206ENST00000455383 SRRM2Q9UQ35 2752 aaKnown RBP12.61□□□□□ -0.39
MSH6-206ENST00000455383 IGHV1OR15-1A0A075B7D0 117 aa12.61□□□□□ -0.39
MSH6-206ENST00000455383 L7N2F9 121 aa12.61□□□□□ -0.39
MSH6-206ENST00000455383 VAMP2P63027 116 aa12.61□□□□□ -0.39
MSH6-206ENST00000455383 WFDC10BQ8IUB3 73 aa12.61□□□□□ -0.39
MSH6-206ENST00000455383 IQCF2Q8IXL9 164 aa12.61□□□□□ -0.39
MSH6-206ENST00000455383 UQCC1Q9NVA1 299 aa12.61□□□□□ -0.39
MSH6-206ENST00000455383 K7EQD1 137 aa12.6□□□□□ -0.39
MSH6-206ENST00000455383 RGS13O14921 159 aa12.6□□□□□ -0.39
MSH6-206ENST00000455383 CST7O76096 145 aa12.6□□□□□ -0.39
MSH6-206ENST00000455383 EXOC3-AS1Q8N2X6 119 aa12.6□□□□□ -0.39
MSH6-206ENST00000455383 C20orf85Q9H1P6 137 aa12.6□□□□□ -0.39
MSH6-206ENST00000455383 ZNF492Q9P255 531 aa12.6□□□□□ -0.39
MSH6-206ENST00000455383 TIMM9Q9Y5J7 89 aa12.6□□□□□ -0.39
MSH6-206ENST00000455383 FAM24AA6NFZ4 105 aa12.59□□□□□ -0.39
MSH6-206ENST00000455383 PYYP10082 97 aa12.59□□□□□ -0.39
MSH6-206ENST00000455383 BCAP31P51572 246 aa12.59□□□□□ -0.39
MSH6-206ENST00000455383 IGKV2-40A0A087WW87 121 aaPredicted RBP12.58□□□□□ -0.4
MSH6-206ENST00000455383 TRBV7-9A0A0J9YWB2 115 aa12.58□□□□□ -0.4
MSH6-206ENST00000455383 FAM229AH3BQW9 127 aa12.58□□□□□ -0.4
MSH6-206ENST00000455383 CCSO14618 274 aa12.58□□□□□ -0.4
MSH6-206ENST00000455383 IGKV2D-40P01614 121 aaPredicted RBP12.58□□□□□ -0.4
MSH6-206ENST00000455383 EVI2AP22794 236 aa12.58□□□□□ -0.4
MSH6-206ENST00000455383 INPP1P49441 399 aa12.58□□□□□ -0.4
MSH6-206ENST00000455383 CAV2P51636 162 aa12.58□□□□□ -0.4
MSH6-206ENST00000455383 SPANXN2Q5MJ10 180 aa12.58□□□□□ -0.4
MSH6-206ENST00000455383 TRIQKQ629K1 86 aa12.58□□□□□ -0.4
MSH6-206ENST00000455383 SDHCQ99643 169 aaPredicted RBP12.58□□□□□ -0.4
MSH6-206ENST00000455383 ARPC5LQ9BPX5 153 aa12.58□□□□□ -0.4
MSH6-206ENST00000455383 TMEM70Q9BUB7 260 aa12.58□□□□□ -0.4
MSH6-206ENST00000455383 LSM5Q9Y4Y9 91 aaKnown RBP12.58□□□□□ -0.4
MSH6-206ENST00000455383 SRIP30626 198 aa12.57□□□□□ -0.4
MSH6-206ENST00000455383 ZNF415Q09FC8 603 aa12.57□□□□□ -0.4
MSH6-206ENST00000455383 CNPY1Q3B7I2 92 aa12.57□□□□□ -0.4
MSH6-206ENST00000455383 TMEM78Q5T7P6 136 aa12.57□□□□□ -0.4
MSH6-206ENST00000455383 OR10G4Q8NGN3 311 aa12.57□□□□□ -0.4
MSH6-206ENST00000455383 AAMDCQ9H7C9 122 aa12.57□□□□□ -0.4
MSH6-206ENST00000455383 TRGV4A0A0C4DH28 118 aa12.56□□□□□ -0.4
MSH6-206ENST00000455383 UBE2L5PA0A1B0GUS4 154 aa12.56□□□□□ -0.4
MSH6-206ENST00000455383 LRCOL1A6NCL2 159 aa12.56□□□□□ -0.4
MSH6-206ENST00000455383 E5RGE8 158 aa12.56□□□□□ -0.4
MSH6-206ENST00000455383 S100A11P31949 105 aa12.56□□□□□ -0.4
MSH6-206ENST00000455383 SULT1A1P50225 295 aa12.56□□□□□ -0.4
MSH6-206ENST00000455383 HAMPP81172 84 aa12.56□□□□□ -0.4
MSH6-206ENST00000455383 BAXQ07812 192 aa12.56□□□□□ -0.4
MSH6-206ENST00000455383 ZNF846Q147U1 533 aa12.56□□□□□ -0.4
MSH6-206ENST00000455383 Q6ZSN1 163 aa12.56□□□□□ -0.4
MSH6-206ENST00000455383 BLNKQ8WV28 456 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms