RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 TMEM256Q8N2U0 113 aa6.72□□□□□ -1.33
CDC42EP3-203ENST00000453555 NDUFAF3Q9BU61 184 aa6.72□□□□□ -1.33
CDC42EP3-203ENST00000453555 PAXXQ9BUH6 204 aa6.72□□□□□ -1.33
CDC42EP3-203ENST00000453555 MRPL32Q9BYC8 188 aaKnown RBP6.72□□□□□ -1.33
CDC42EP3-203ENST00000453555 AAMDCQ9H7C9 122 aa6.72□□□□□ -1.33
CDC42EP3-203ENST00000453555 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
CDC42EP3-203ENST00000453555 VPS13DQ5THJ4 4388 aa6.71□□□□□ -1.33
CDC42EP3-203ENST00000453555 TRAV12-3A0A0B4J271 114 aa6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 PLAC8L1A1L4L8 177 aa6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 OR7C2O60412 319 aa6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 LEPP41159 167 aa6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 TAS2R60P59551 318 aa6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 PDE6HQ13956 83 aa6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 OXA1LQ15070 435 aa6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 RNF141Q8WVD5 230 aa6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 FXYD5Q96DB9 178 aa6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 MRPL53Q96EL3 112 aaKnown RBP6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 C16orf74Q96GX8 76 aa6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 PRELID1Q9Y255 219 aa6.71□□□□□ -1.34
CDC42EP3-203ENST00000453555 IGKV2-40A0A087WW87 121 aaPredicted RBP6.7□□□□□ -1.34
CDC42EP3-203ENST00000453555 LYRM9A8MSI8 78 aa6.7□□□□□ -1.34
CDC42EP3-203ENST00000453555 H3BS24 57 aa6.7□□□□□ -1.34
CDC42EP3-203ENST00000453555 H7BYZ3 331 aa6.7□□□□□ -1.34
CDC42EP3-203ENST00000453555 IGKV2D-40P01614 121 aaPredicted RBP6.7□□□□□ -1.34
CDC42EP3-203ENST00000453555 ZNF503Q96F45 646 aa6.7□□□□□ -1.34
CDC42EP3-203ENST00000453555 PHYHIPLQ96FC7 376 aa6.7□□□□□ -1.34
CDC42EP3-203ENST00000453555 C20orf144Q9BQM9 153 aa6.7□□□□□ -1.34
CDC42EP3-203ENST00000453555 AGPAT4-IT1Q9H0P7 198 aa6.7□□□□□ -1.34
CDC42EP3-203ENST00000453555 RAB2AP61019 212 aa6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 RANP62826 216 aaKnown RBP6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 UBE2L3P68036 154 aaKnown RBP6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 ACOT6Q3I5F7 207 aaPredicted RBP6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 KHDC3LQ587J8 217 aa6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 Q5BKY6 102 aa6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 CCDC28AQ8IWP9 274 aa6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 RNASE8Q8TDE3 154 aaKnown RBP6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 TMEM263Q8WUH6 116 aaKnown RBP6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 LINC00477Q96M19 166 aa6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 ODF3Q96PU9 254 aa6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 VGLL1Q99990 258 aa6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 NOP10Q9NPE3 64 aaKnown RBP6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 TIMM8BQ9Y5J9 83 aaPredicted RBP6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 DNAH6Q9C0G6 4158 aa6.69□□□□□ -1.34
CDC42EP3-203ENST00000453555 A0A1W2PPV4 95 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 C7orf71A4D174 169 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 F5H768 121 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 SLC25A5P05141 298 aaKnown RBP6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 GPX1P07203 203 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 P0DMU3 169 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 FAM231AP0DMU4 169 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 FAM231CP0DMU5 169 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 M6PRP20645 277 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 RNASE4P34096 147 aaKnown RBP6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 TAS2R45P59539 299 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 CD300CQ08708 224 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 BTN1A1Q13410 526 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 TMEM78Q5T7P6 136 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 TMEM88Q6PEY1 159 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 ZNF493Q6ZR52 646 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 C9orf47Q6ZRZ4 202 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 HSD17B11Q8NBQ5 300 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 Q9H3A6 140 aa6.68□□□□□ -1.34
CDC42EP3-203ENST00000453555 NACAE9PAV3 2078 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 SNURFLB1AK76 121 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 HMGB3O15347 200 aaKnown RBP6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 ATP5G1P05496 136 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 GIPP09681 153 aaPredicted RBP6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 CSN1S1P47710 185 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 ATP5G3P48201 142 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 RGS21Q2M5E4 152 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 UBE2DNLQ8IWF7 75 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 POM121L12Q8N7R1 296 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 OR10G4Q8NGN3 311 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 OR10G9Q8NGN4 311 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 OR10G7Q8NGN6 311 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 Q8TAT8 98 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 FAM210BQ96KR6 192 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 FAM19A4Q96LR4 140 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 HYLS1Q96M11 299 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 AQP10Q96PS8 301 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 ZNF492Q9P255 531 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 RPH3ALQ9UNE2 315 aa6.67□□□□□ -1.34
CDC42EP3-203ENST00000453555 FXYD6-FXYD2A0A087WZ82 144 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 GAGE12BA1L429 117 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 CBY3A6NI87 242 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 KLLNB2CW77 178 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 ZNF324O75467 553 aaPredicted RBP6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 GAGE7O76087 117 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 GAGE12FP0CL80 117 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 GAGE12GP0CL81 117 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 GAGE12IP0CL82 117 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 ZNF266Q14584 549 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 PRR9Q5T870 116 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 Q6ZQT7 251 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 LYPD1Q8N2G4 141 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 PYGO2Q9BRQ0 406 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 BIRC6Q9NR09 4857 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 DNAH10Q8IVF4 4471 aa6.66□□□□□ -1.34
CDC42EP3-203ENST00000453555 PGPA6NDG6 321 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms