RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CA1P00915 261 aaPredicted RBP12.33□□□□□ -0.44
SNX17-204ENST00000453453 RNASE1P07998 156 aaKnown RBP12.33□□□□□ -0.44
SNX17-204ENST00000453453 HIST1H1AQ02539 215 aaPredicted RBP12.33□□□□□ -0.44
SNX17-204ENST00000453453 VAMP3Q15836 100 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 MAJINQ3KP22 176 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 BVES-AS1Q5T3Y7 98 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 Q6ZS46 218 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 DPF1Q92782 380 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 URB1-AS1Q96HZ7 61 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 MLST8Q9BVC4 326 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 ZNF702PQ9H963 129 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 LINC00527Q9UJ94 153 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 HSPB8Q9UJY1 196 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 EPDR1Q9UM22 224 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 MAST4O15021 2626 aa12.32□□□□□ -0.44
SNX17-204ENST00000453453 TRBV6-1A0A0K0K1D8 114 aa12.32□□□□□ -0.44
SNX17-204ENST00000453453 C19orf54Q5BKX5 351 aa12.32□□□□□ -0.44
SNX17-204ENST00000453453 GATD1Q8NB37 220 aa12.32□□□□□ -0.44
SNX17-204ENST00000453453 ESM1Q9NQ30 184 aa12.32□□□□□ -0.44
SNX17-204ENST00000453453 IGHV1-24A0A0C4DH33 117 aa12.31□□□□□ -0.44
SNX17-204ENST00000453453 C19orf71A6NCJ1 209 aa12.31□□□□□ -0.44
SNX17-204ENST00000453453 H3BUA1 57 aa12.31□□□□□ -0.44
SNX17-204ENST00000453453 CRLF1O75462 422 aa12.31□□□□□ -0.44
SNX17-204ENST00000453453 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
SNX17-204ENST00000453453 RBPMS2Q6ZRY4 209 aaKnown RBP12.31□□□□□ -0.44
SNX17-204ENST00000453453 FANCD2OSQ96PS1 177 aa12.31□□□□□ -0.44
SNX17-204ENST00000453453 FNDC4Q9H6D8 234 aaPredicted RBP12.31□□□□□ -0.44
SNX17-204ENST00000453453 SCRT2Q9NQ03 307 aa12.31□□□□□ -0.44
SNX17-204ENST00000453453 MTORP42345 2549 aa12.31□□□□□ -0.44
SNX17-204ENST00000453453 I3L2K1 104 aa12.3□□□□□ -0.44
SNX17-204ENST00000453453 GATA2P23769 480 aaPredicted RBP12.3□□□□□ -0.44
SNX17-204ENST00000453453 SPATA12Q7Z6I5 190 aa12.3□□□□□ -0.44
SNX17-204ENST00000453453 Q8N2B8 174 aa12.3□□□□□ -0.44
SNX17-204ENST00000453453 C5orf17Q8NAS9 161 aa12.3□□□□□ -0.44
SNX17-204ENST00000453453 OR2T6Q8NHC8 308 aa12.3□□□□□ -0.44
SNX17-204ENST00000453453 MAP1LC3CQ9BXW4 147 aa12.3□□□□□ -0.44
SNX17-204ENST00000453453 ANK3Q12955 4377 aaKnown RBP12.3□□□□□ -0.44
SNX17-204ENST00000453453 IGHV3-21A0A0B4J1V1 117 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 TRAV5A0A0B4J249 113 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 A0A1B0GW15 77 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 NPIPB6E9PJ23 425 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 SCGB2A1O75556 95 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 LTAP01374 205 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 MLANAQ16655 118 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 KLK9Q2XQG4 91 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 TMEM95Q3KNT9 176 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 KLK9Q9UKQ9 250 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 LOC102724200A0A096LPH7 203 aaPredicted RBP12.29□□□□□ -0.44
SNX17-204ENST00000453453 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 K7EIM0 57 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 HAX1O00165 279 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 BRI3O95415 125 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 TRGV3P03979 118 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 SEC11AP67812 179 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 PATE2Q6UY27 113 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 TMEM116Q8NCL8 245 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 NPIPB3Q92617 1050 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 CLEC5AQ9NY25 188 aa12.29□□□□□ -0.44
SNX17-204ENST00000453453 F8P00451 2351 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 TMEM89A2RUT3 159 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 P01737 135 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 IGHV3-48P01763 117 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 SLC25A5P05141 298 aaKnown RBP12.28□□□□□ -0.44
SNX17-204ENST00000453453 PYYP10082 97 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 PF4V1P10720 104 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
SNX17-204ENST00000453453 CAMPP49913 170 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 MFAP4P55083 255 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 MPV17L2Q567V2 206 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 LINC01545Q5VT33 79 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 MORN5Q5VZ52 161 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 C16orf54Q6UWD8 224 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 LINC00479Q96M42 142 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 TRGV9Q99603 122 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 CST9LQ9H4G1 147 aa12.28□□□□□ -0.44
SNX17-204ENST00000453453 PEF1Q9UBV8 284 aaKnown RBP12.28□□□□□ -0.44
SNX17-204ENST00000453453 NSD1Q96L73 2696 aaPredicted RBP12.27□□□□□ -0.44
SNX17-204ENST00000453453 IGKV1D-37A0A075B6S9 117 aa12.27□□□□□ -0.44
SNX17-204ENST00000453453 NUDT3O95989 172 aa12.27□□□□□ -0.44
SNX17-204ENST00000453453 PLP1P60201 277 aa12.27□□□□□ -0.44
SNX17-204ENST00000453453 CFHR3Q02985 330 aa12.27□□□□□ -0.44
SNX17-204ENST00000453453 ATP5G2Q06055 141 aa12.27□□□□□ -0.44
SNX17-204ENST00000453453 C15orf32Q32M92 178 aa12.27□□□□□ -0.44
SNX17-204ENST00000453453 OCIAD2Q56VL3 154 aa12.27□□□□□ -0.44
SNX17-204ENST00000453453 EEF1AKMT3Q96AZ1 226 aa12.27□□□□□ -0.44
SNX17-204ENST00000453453 SSBP4Q9BWG4 385 aaPredicted RBP12.27□□□□□ -0.44
SNX17-204ENST00000453453 C21orf62Q9NYP8 219 aa12.27□□□□□ -0.44
SNX17-204ENST00000453453 K7ERU9 68 aa12.26□□□□□ -0.45
SNX17-204ENST00000453453 IGLV1-40P01703 118 aa12.26□□□□□ -0.45
SNX17-204ENST00000453453 FOXA3P55318 350 aaPredicted RBP12.26□□□□□ -0.45
SNX17-204ENST00000453453 Q6ZSV7 163 aa12.26□□□□□ -0.45
SNX17-204ENST00000453453 CHEK1O14757 476 aa12.26□□□□□ -0.45
SNX17-204ENST00000453453 GNG7O60262 68 aa12.26□□□□□ -0.45
SNX17-204ENST00000453453 IGHG4P01861 327 aa12.26□□□□□ -0.45
SNX17-204ENST00000453453 COX8AP10176 69 aa12.26□□□□□ -0.45
SNX17-204ENST00000453453 PRR27Q6MZM9 219 aa12.26□□□□□ -0.45
SNX17-204ENST00000453453 DAZAP1Q96EP5 407 aaKnown RBP12.26□□□□□ -0.45
SNX17-204ENST00000453453 USMG5Q96IX5 58 aa12.26□□□□□ -0.45
SNX17-204ENST00000453453 TRBV7-1A0A0A6YYK4 115 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms