RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 RNF114Q9Y508 228 aa9.05□□□□□ -0.96
VTA1-203ENST00000452973 SMAD7O15105 426 aaKnown RBP9.04□□□□□ -0.96
VTA1-203ENST00000452973 ORM1P02763 201 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 Q5PR19 223 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 SAPCD1Q5SSQ6 148 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 C8orf86Q6ZUL3 223 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 A0A096LNT2 108 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 SERTM2A0A1B0GWG4 89 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 J3KRW8 73 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 HSBP1O75506 76 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 PMCHL1Q16048 86 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 KLK9Q2XQG4 91 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 C16orf92Q96LL3 132 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 NRN1Q9NPD7 142 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 KLK9Q9UKQ9 250 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 TIMM8BQ9Y5J9 83 aaPredicted RBP9.04□□□□□ -0.96
VTA1-203ENST00000452973 CSN3P07498 182 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 ZNF138P52744 262 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 PKIAP61925 76 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 LYZL1Q6UWQ5 148 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 IL17RELQ6ZVW7 336 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 ARL6IP6Q8N6S5 226 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 TENM4Q6N022 2769 aa9.04□□□□□ -0.96
VTA1-203ENST00000452973 NBPF19A0A087WUL8 3843 aa9.03□□□□□ -0.96
VTA1-203ENST00000452973 ZNF324O75467 553 aaPredicted RBP9.03□□□□□ -0.96
VTA1-203ENST00000452973 ESDP10768 282 aa9.03□□□□□ -0.96
VTA1-203ENST00000452973 SRD5A1P18405 259 aa9.03□□□□□ -0.96
VTA1-203ENST00000452973 DEFB1P60022 68 aa9.03□□□□□ -0.96
VTA1-203ENST00000452973 TDRG1Q3Y452 100 aa9.03□□□□□ -0.96
VTA1-203ENST00000452973 NDFIP1Q9BT67 221 aa9.03□□□□□ -0.96
VTA1-203ENST00000452973 CRIP2P52943 208 aaPredicted RBP9.03□□□□□ -0.96
VTA1-203ENST00000452973 DEFB113Q30KQ7 82 aa9.03□□□□□ -0.96
VTA1-203ENST00000452973 CYB5R2Q6BCY4 276 aa9.03□□□□□ -0.96
VTA1-203ENST00000452973 Q96MF0 132 aa9.03□□□□□ -0.96
VTA1-203ENST00000452973 TMEM213A2RRL7 107 aa9.02□□□□□ -0.96
VTA1-203ENST00000452973 FAM231BA6NCW3 169 aa9.02□□□□□ -0.96
VTA1-203ENST00000452973 TM4SF20Q53R12 229 aa9.02□□□□□ -0.96
VTA1-203ENST00000452973 BORCS7Q96B45 105 aa9.02□□□□□ -0.96
VTA1-203ENST00000452973 BEX4Q9NWD9 120 aaPredicted RBP9.02□□□□□ -0.96
VTA1-203ENST00000452973 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.02□□□□□ -0.97
VTA1-203ENST00000452973 TRAV8-2A0A0B4J237 113 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 DEFA6Q01524 100 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 RIGQ13278 110 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 C1orf194Q5T5A4 169 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 C16orf54Q6UWD8 224 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 NIT1Q86X76 327 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 USMG5Q96IX5 58 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 SLC50A1Q9BRV3 221 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 HAX1O00165 279 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 IGHV4-31P0DP07 118 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 EDN2P20800 178 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 DDTP30046 118 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 AGPAT4-IT1Q9H0P7 198 aa9.02□□□□□ -0.97
VTA1-203ENST00000452973 A0A087X0K7 114 aa9.01□□□□□ -0.97
VTA1-203ENST00000452973 LOC102724200A0A096LPH7 203 aaPredicted RBP9.01□□□□□ -0.97
VTA1-203ENST00000452973 M0R2Z0 102 aa9.01□□□□□ -0.97
VTA1-203ENST00000452973 NPFFR1Q9GZQ6 430 aa9.01□□□□□ -0.97
VTA1-203ENST00000452973 TMEM78Q5T7P6 136 aa9.01□□□□□ -0.97
VTA1-203ENST00000452973 ZNF738Q8NE65 137 aa9.01□□□□□ -0.97
VTA1-203ENST00000452973 A0A0G2JLM5 398 aa9□□□□□ -0.97
VTA1-203ENST00000452973 NDUFA4O00483 81 aa9□□□□□ -0.97
VTA1-203ENST00000452973 Q6ZQT7 251 aa9□□□□□ -0.97
VTA1-203ENST00000452973 PAM16Q9Y3D7 125 aa9□□□□□ -0.97
VTA1-203ENST00000452973 ITPR3Q14573 2671 aa9□□□□□ -0.97
VTA1-203ENST00000452973 BMI1P35226 326 aa9□□□□□ -0.97
VTA1-203ENST00000452973 DNLZQ5SXM8 178 aa9□□□□□ -0.97
VTA1-203ENST00000452973 U3KQE9 123 aa9□□□□□ -0.97
VTA1-203ENST00000452973 ZNF469Q96JG9 3925 aaPredicted RBP9□□□□□ -0.97
VTA1-203ENST00000452973 FABP5P3A8MUU1 101 aa9□□□□□ -0.97
VTA1-203ENST00000452973 IGLV1-40P01703 118 aa9□□□□□ -0.97
VTA1-203ENST00000452973 LOXL1Q08397 574 aaPredicted RBP9□□□□□ -0.97
VTA1-203ENST00000452973 TWIST1Q15672 202 aa9□□□□□ -0.97
VTA1-203ENST00000452973 GLMPQ8WWB7 406 aa9□□□□□ -0.97
VTA1-203ENST00000452973 TMEM190Q8WZ59 177 aa9□□□□□ -0.97
VTA1-203ENST00000452973 HELZ2Q9BYK8 2649 aaKnown RBP8.99□□□□□ -0.97
VTA1-203ENST00000452973 HOXA3O43365 443 aaPredicted RBP8.99□□□□□ -0.97
VTA1-203ENST00000452973 WFDC3Q8IUB2 231 aa8.99□□□□□ -0.97
VTA1-203ENST00000452973 ATOH7Q8N100 152 aa8.99□□□□□ -0.97
VTA1-203ENST00000452973 C20orf173Q96LM9 149 aa8.99□□□□□ -0.97
VTA1-203ENST00000452973 RHPN1-AS1Q9BWJ2 59 aa8.99□□□□□ -0.97
VTA1-203ENST00000452973 CLEC5AQ9NY25 188 aa8.99□□□□□ -0.97
VTA1-203ENST00000452973 ACANP16112 2415 aa8.99□□□□□ -0.97
VTA1-203ENST00000452973 SETD2Q9BYW2 2564 aaPredicted RBP8.99□□□□□ -0.97
VTA1-203ENST00000452973 J3QLI3 93 aa8.99□□□□□ -0.97
VTA1-203ENST00000452973 KLF5Q13887 457 aaPredicted RBP8.99□□□□□ -0.97
VTA1-203ENST00000452973 FER1L6-AS1Q8NA97 138 aa8.99□□□□□ -0.97
VTA1-203ENST00000452973 CR1P17927 2039 aa8.99□□□□□ -0.97
VTA1-203ENST00000452973 SORL1Q92673 2214 aa8.99□□□□□ -0.97
VTA1-203ENST00000452973 FLNAP21333 2647 aaKnown RBP8.98□□□□□ -0.97
VTA1-203ENST00000452973 RPLP1P05386 114 aaKnown RBP8.98□□□□□ -0.97
VTA1-203ENST00000452973 C3orf79P0CE67 100 aa8.98□□□□□ -0.97
VTA1-203ENST00000452973 AMN1Q8IY45 258 aa8.98□□□□□ -0.97
VTA1-203ENST00000452973 URB1-AS1Q96HZ7 61 aa8.98□□□□□ -0.97
VTA1-203ENST00000452973 MSRB1Q9NZV6 116 aa8.98□□□□□ -0.97
VTA1-203ENST00000452973 PEF1Q9UBV8 284 aaKnown RBP8.98□□□□□ -0.97
VTA1-203ENST00000452973 F6UB75 175 aa8.98□□□□□ -0.97
VTA1-203ENST00000452973 H3BUA1 57 aa8.98□□□□□ -0.97
VTA1-203ENST00000452973 LOC389332A0A1B0GUA5 103 aa8.98□□□□□ -0.97
VTA1-203ENST00000452973 TFPI2P48307 235 aa8.97□□□□□ -0.97
VTA1-203ENST00000452973 FOXE3Q13461 319 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms