RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 TMEM167AQ8TBQ9 72 aa14.58□□□□□ -0.07
PTPA-223ENST00000452489 PLEKHB2Q96CS7 222 aa14.58□□□□□ -0.07
PTPA-223ENST00000452489 LY6G6EA0A0G2JKS1 128 aa14.58□□□□□ -0.08
PTPA-223ENST00000452489 IGHV1-2P23083 117 aa14.58□□□□□ -0.08
PTPA-223ENST00000452489 OR11H6Q8NGC7 330 aa14.58□□□□□ -0.08
PTPA-223ENST00000452489 MYOZ3Q8TDC0 251 aa14.58□□□□□ -0.08
PTPA-223ENST00000452489 U3KQA8 63 aa14.58□□□□□ -0.08
PTPA-223ENST00000452489 PLNP26678 52 aa14.57□□□□□ -0.08
PTPA-223ENST00000452489 SRSF9Q13242 221 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTPA-223ENST00000452489 RASL10AQ92737 203 aa14.57□□□□□ -0.08
PTPA-223ENST00000452489 WDFY4Q6ZS81 3184 aa14.57□□□□□ -0.08
PTPA-223ENST00000452489 DSCAML1Q8TD84 2053 aa14.56□□□□□ -0.08
PTPA-223ENST00000452489 CD7P09564 240 aa14.56□□□□□ -0.08
PTPA-223ENST00000452489 CRIP2P52943 208 aaPredicted RBP14.56□□□□□ -0.08
PTPA-223ENST00000452489 LINC01559Q495D7 138 aa14.56□□□□□ -0.08
PTPA-223ENST00000452489 TTTY12Q9BZ98 90 aa14.56□□□□□ -0.08
PTPA-223ENST00000452489 AAMDCQ9H7C9 122 aa14.56□□□□□ -0.08
PTPA-223ENST00000452489 NGBQ9NPG2 151 aa14.56□□□□□ -0.08
PTPA-223ENST00000452489 DSCAMO60469 2012 aa14.56□□□□□ -0.08
PTPA-223ENST00000452489 DSPP15924 2871 aaKnown RBP14.56□□□□□ -0.08
PTPA-223ENST00000452489 IGLV2-18A0A075B6J9 118 aa14.56□□□□□ -0.08
PTPA-223ENST00000452489 ASIPP42127 132 aa14.56□□□□□ -0.08
PTPA-223ENST00000452489 CCL11P51671 97 aa14.56□□□□□ -0.08
PTPA-223ENST00000452489 URB1O60287 2271 aaKnown RBP14.55□□□□□ -0.08
PTPA-223ENST00000452489 LYRM7Q5U5X0 104 aa14.55□□□□□ -0.08
PTPA-223ENST00000452489 C6orf15Q6UXA7 325 aaPredicted RBP14.55□□□□□ -0.08
PTPA-223ENST00000452489 NDUFA11Q86Y39 141 aa14.55□□□□□ -0.08
PTPA-223ENST00000452489 Q8N8P6 123 aa14.55□□□□□ -0.08
PTPA-223ENST00000452489 RAXQ9Y2V3 346 aa14.55□□□□□ -0.08
PTPA-223ENST00000452489 SLC25A20O43772 301 aa14.55□□□□□ -0.08
PTPA-223ENST00000452489 SCGB1D4Q6XE38 83 aa14.55□□□□□ -0.08
PTPA-223ENST00000452489 DCHS1Q96JQ0 3298 aa14.55□□□□□ -0.08
PTPA-223ENST00000452489 SCGB1C2P0DMR2 95 aa14.54□□□□□ -0.08
PTPA-223ENST00000452489 ZNF833PQ6ZTB9 187 aa14.54□□□□□ -0.08
PTPA-223ENST00000452489 ZNF575Q86XF7 245 aa14.54□□□□□ -0.08
PTPA-223ENST00000452489 RAB1BQ9H0U4 201 aa14.54□□□□□ -0.08
PTPA-223ENST00000452489 ZNF815PA8K554 130 aa14.54□□□□□ -0.08
PTPA-223ENST00000452489 IGLC6P0CF74 106 aa14.54□□□□□ -0.08
PTPA-223ENST00000452489 ZNF80P51504 273 aaPredicted RBP14.54□□□□□ -0.08
PTPA-223ENST00000452489 C9JAW5 83 aa14.53□□□□□ -0.08
PTPA-223ENST00000452489 DEFB108BQ8NET1 73 aa14.53□□□□□ -0.08
PTPA-223ENST00000452489 ZFHX4Q86UP3 3567 aa14.53□□□□□ -0.08
PTPA-223ENST00000452489 F8VRH5 84 aa14.53□□□□□ -0.08
PTPA-223ENST00000452489 IGLV2-23P01705 113 aa14.53□□□□□ -0.08
PTPA-223ENST00000452489 IL11RAQ14626 422 aa14.53□□□□□ -0.08
PTPA-223ENST00000452489 Q6Q795 121 aa14.53□□□□□ -0.08
PTPA-223ENST00000452489 ODF3Q96PU9 254 aa14.53□□□□□ -0.08
PTPA-223ENST00000452489 VKORC1Q9BQB6 163 aa14.53□□□□□ -0.08
PTPA-223ENST00000452489 PRADC1Q9BSG0 188 aa14.53□□□□□ -0.08
PTPA-223ENST00000452489 ONECUT1Q9UBC0 465 aa14.53□□□□□ -0.08
PTPA-223ENST00000452489 C3orf36Q3SXR2 165 aa14.52□□□□□ -0.08
PTPA-223ENST00000452489 Q8TAT8 98 aa14.52□□□□□ -0.08
PTPA-223ENST00000452489 IGKV2-40A0A087WW87 121 aaPredicted RBP14.52□□□□□ -0.09
PTPA-223ENST00000452489 IGKV2D-40P01614 121 aaPredicted RBP14.52□□□□□ -0.09
PTPA-223ENST00000452489 TRPT1Q86TN4 253 aaKnown RBP14.52□□□□□ -0.09
PTPA-223ENST00000452489 C15orf53Q8NAA6 179 aa14.52□□□□□ -0.09
PTPA-223ENST00000452489 H7C1H1 209 aa14.51□□□□□ -0.09
PTPA-223ENST00000452489 LAGE3Q14657 143 aa14.51□□□□□ -0.09
PTPA-223ENST00000452489 OR4C13Q8NGP0 309 aa14.51□□□□□ -0.09
PTPA-223ENST00000452489 PRRC2CQ9Y520 2896 aaKnown RBP14.51□□□□□ -0.09
PTPA-223ENST00000452489 DTX2Q86UW9 622 aa14.51□□□□□ -0.09
PTPA-223ENST00000452489 SCNM1Q9BWG6 230 aa14.51□□□□□ -0.09
PTPA-223ENST00000452489 MDFICQ9P1T7 246 aa14.51□□□□□ -0.09
PTPA-223ENST00000452489 TRAV26-2A0A0B4J265 109 aa14.5□□□□□ -0.09
PTPA-223ENST00000452489 MRGPRG-AS1Q2M3A8 158 aa14.5□□□□□ -0.09
PTPA-223ENST00000452489 FAM216BQ8N7L0 139 aa14.5□□□□□ -0.09
PTPA-223ENST00000452489 KLHL30-AS1Q8NEE0 82 aa14.5□□□□□ -0.09
PTPA-223ENST00000452489 NTN5Q8WTR8 489 aaPredicted RBP14.5□□□□□ -0.09
PTPA-223ENST00000452489 KLK15Q9H2R5 256 aa14.5□□□□□ -0.09
PTPA-223ENST00000452489 CSDC2Q9Y534 153 aaKnown RBP14.5□□□□□ -0.09
PTPA-223ENST00000452489 CECR9P0C854 216 aa14.5□□□□□ -0.09
PTPA-223ENST00000452489 MSMPQ1L6U9 139 aa14.5□□□□□ -0.09
PTPA-223ENST00000452489 PRR30Q53SZ7 412 aaPredicted RBP14.5□□□□□ -0.09
PTPA-223ENST00000452489 Q8N1Y9 231 aa14.5□□□□□ -0.09
PTPA-223ENST00000452489 CHCHD5Q9BSY4 110 aa14.5□□□□□ -0.09
PTPA-223ENST00000452489 SLC25A16P16260 332 aa14.49□□□□□ -0.09
PTPA-223ENST00000452489 OR10J6PQ8NGY7 276 aa14.49□□□□□ -0.09
PTPA-223ENST00000452489 PRR25Q96S07 402 aa14.49□□□□□ -0.09
PTPA-223ENST00000452489 K7EM74 188 aa14.49□□□□□ -0.09
PTPA-223ENST00000452489 CFC1BP0CG36 223 aa14.49□□□□□ -0.09
PTPA-223ENST00000452489 CFC1P0CG37 223 aa14.49□□□□□ -0.09
PTPA-223ENST00000452489 CCL13Q99616 98 aa14.49□□□□□ -0.09
PTPA-223ENST00000452489 SHANK2-AS3Q9BTD1 123 aa14.49□□□□□ -0.09
PTPA-223ENST00000452489 ORM1P02763 201 aa14.48□□□□□ -0.09
PTPA-223ENST00000452489 LINC01587Q99440 93 aa14.48□□□□□ -0.09
PTPA-223ENST00000452489 TMEM155Q4W5P6 130 aa14.48□□□□□ -0.09
PTPA-223ENST00000452489 IGKV3-15P01624 115 aa14.47□□□□□ -0.09
PTPA-223ENST00000452489 TEX49A0A1B0GTD5 131 aa14.47□□□□□ -0.09
PTPA-223ENST00000452489 TRGV3P03979 118 aa14.47□□□□□ -0.09
PTPA-223ENST00000452489 LYPD1Q8N2G4 141 aa14.47□□□□□ -0.09
PTPA-223ENST00000452489 PVRIGQ6DKI7 326 aa14.46□□□□□ -0.09
PTPA-223ENST00000452489 C10orf126Q8N4M7 172 aa14.46□□□□□ -0.09
PTPA-223ENST00000452489 DEFB127Q9H1M4 99 aa14.46□□□□□ -0.09
PTPA-223ENST00000452489 H3BRN7 92 aa14.46□□□□□ -0.1
PTPA-223ENST00000452489 K7ESF4 209 aa14.46□□□□□ -0.1
PTPA-223ENST00000452489 SPRY3O43610 288 aa14.46□□□□□ -0.1
PTPA-223ENST00000452489 LHBP01229 141 aa14.46□□□□□ -0.1
PTPA-223ENST00000452489 NRGNQ92686 78 aa14.46□□□□□ -0.1
PTPA-223ENST00000452489 GAFA1Q96PS6 74 aa14.46□□□□□ -0.1
PTPA-223ENST00000452489 C21orf62Q9NYP8 219 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms