RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ZFP69Q49AA0 526 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 BLNKQ8WV28 456 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 ODF3Q96PU9 254 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 TRAV12-3A0A0B4J271 114 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 PRSS29PA6NIE9 313 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 SNURFLB1AK76 121 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 NPIPB6E9PJ23 425 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 M0R3E3 92 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 C1QBP02746 253 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 CLINT1Q14677 625 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 SOHLH1Q5JUK2 328 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
CHD3-206ENST00000452447 AAMDCQ9H7C9 122 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 OR5AC2Q9NZP5 309 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 RTL8CO15255 209 aa9.06□□□□□ -0.96
CHD3-206ENST00000452447 PYYP10082 97 aa9.06□□□□□ -0.96
CHD3-206ENST00000452447 FAM3BP58499 235 aaPredicted RBP9.06□□□□□ -0.96
CHD3-206ENST00000452447 GCSAMLQ5JQS6 135 aa9.06□□□□□ -0.96
CHD3-206ENST00000452447 ST6GAL2Q96JF0 529 aa9.06□□□□□ -0.96
CHD3-206ENST00000452447 PYGO2Q9BRQ0 406 aa9.06□□□□□ -0.96
CHD3-206ENST00000452447 KCNIP2Q9NS61 270 aa9.06□□□□□ -0.96
CHD3-206ENST00000452447 MUC4Q99102 2169 aa9.05□□□□□ -0.96
CHD3-206ENST00000452447 KIAA1109Q2LD37 5005 aa9.05□□□□□ -0.96
CHD3-206ENST00000452447 PKD1P98161 4303 aa9.05□□□□□ -0.96
CHD3-206ENST00000452447 NDUFB4O95168 129 aa9.05□□□□□ -0.96
CHD3-206ENST00000452447 SLC25A5P05141 298 aaKnown RBP9.05□□□□□ -0.96
CHD3-206ENST00000452447 OR5I1Q13606 314 aa9.05□□□□□ -0.96
CHD3-206ENST00000452447 Q6ZR54 194 aa9.05□□□□□ -0.96
CHD3-206ENST00000452447 EXOC3-AS1Q8N2X6 119 aa9.05□□□□□ -0.96
CHD3-206ENST00000452447 LINC00477Q96M19 166 aa9.05□□□□□ -0.96
CHD3-206ENST00000452447 SLC25A2Q9BXI2 301 aa9.05□□□□□ -0.96
CHD3-206ENST00000452447 FXYD6-FXYD2A0A087WZ82 144 aa9.04□□□□□ -0.96
CHD3-206ENST00000452447 HMSDA8MTL9 139 aa9.04□□□□□ -0.96
CHD3-206ENST00000452447 C17orf112F2Z3M2 114 aa9.04□□□□□ -0.96
CHD3-206ENST00000452447 H0YIZ8 118 aa9.04□□□□□ -0.96
CHD3-206ENST00000452447 CCL18P55774 89 aa9.04□□□□□ -0.96
CHD3-206ENST00000452447 ERCC8Q13216 396 aa9.04□□□□□ -0.96
CHD3-206ENST00000452447 MIR17HGQ75NE6 70 aa9.04□□□□□ -0.96
CHD3-206ENST00000452447 WDR61Q9GZS3 305 aaKnown RBP9.04□□□□□ -0.96
CHD3-206ENST00000452447 MBD2Q9UBB5 411 aa9.04□□□□□ -0.96
CHD3-206ENST00000452447 DYNC1H1Q14204 4646 aaKnown RBP9.04□□□□□ -0.96
CHD3-206ENST00000452447 DNAH11Q96DT5 4516 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 GAGE12BA1L429 117 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 GAGE7O76087 117 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 NBEAP1P0C6P0 100 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 GAGE12FP0CL80 117 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 GAGE12GP0CL81 117 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 GAGE12IP0CL82 117 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 CD300CQ08708 224 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 ZNF345Q14585 488 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 ICAM4Q14773 271 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 FAM167A-AS1Q96KT0 104 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 MRPL32Q9BYC8 188 aaKnown RBP9.03□□□□□ -0.96
CHD3-206ENST00000452447 OR51M1Q9H341 326 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 A0A0D9SG52 128 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 A0A1B0GVY2 172 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 C7orf71A4D174 169 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 TMEM78Q5T7P6 136 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 C1orf134Q5TEV5 83 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 FAM122CQ6P4D5 195 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 RNF141Q8WVD5 230 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 ATP5SQ99766 215 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 PAXXQ9BUH6 204 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 AGPAT4-IT1Q9H0P7 198 aa9.03□□□□□ -0.96
CHD3-206ENST00000452447 KLLNB2CW77 178 aa9.02□□□□□ -0.97
CHD3-206ENST00000452447 GPX1P07203 203 aa9.02□□□□□ -0.97
CHD3-206ENST00000452447 OR10J4P0C629 311 aa9.02□□□□□ -0.97
CHD3-206ENST00000452447 RPL12P30050 165 aaKnown RBP9.02□□□□□ -0.97
CHD3-206ENST00000452447 RNASE4P34096 147 aaKnown RBP9.02□□□□□ -0.97
CHD3-206ENST00000452447 LINC00612Q8N6U2 182 aa9.02□□□□□ -0.97
CHD3-206ENST00000452447 ZNF680Q8NEM1 530 aa9.02□□□□□ -0.97
CHD3-206ENST00000452447 GNPNAT1Q96EK6 184 aaPredicted RBP9.02□□□□□ -0.97
CHD3-206ENST00000452447 TRAV26-1A0A087WT03 109 aa9.01□□□□□ -0.97
CHD3-206ENST00000452447 IGKV2-40A0A087WW87 121 aaPredicted RBP9.01□□□□□ -0.97
CHD3-206ENST00000452447 ARPC5O15511 151 aa9.01□□□□□ -0.97
CHD3-206ENST00000452447 OR7C2O60412 319 aa9.01□□□□□ -0.97
CHD3-206ENST00000452447 IGKV2D-40P01614 121 aaPredicted RBP9.01□□□□□ -0.97
CHD3-206ENST00000452447 DAZ2Q13117 558 aaKnown RBP9.01□□□□□ -0.97
CHD3-206ENST00000452447 C9orf47Q6ZRZ4 202 aa9.01□□□□□ -0.97
CHD3-206ENST00000452447 SCGB1C1Q8TD33 95 aa9.01□□□□□ -0.97
CHD3-206ENST00000452447 FAM19A4Q96LR4 140 aa9.01□□□□□ -0.97
CHD3-206ENST00000452447 AQP10Q96PS8 301 aa9.01□□□□□ -0.97
CHD3-206ENST00000452447 FUT9Q9Y231 359 aa9.01□□□□□ -0.97
CHD3-206ENST00000452447 KANTRA0A1W2PQU2 76 aa9□□□□□ -0.97
CHD3-206ENST00000452447 TAAR5O14804 337 aa9□□□□□ -0.97
CHD3-206ENST00000452447 IFNA5P01569 189 aa9□□□□□ -0.97
CHD3-206ENST00000452447 NMBP08949 121 aa9□□□□□ -0.97
CHD3-206ENST00000452447 CSN1S1P47710 185 aa9□□□□□ -0.97
CHD3-206ENST00000452447 EIF5AP63241 154 aaKnown RBP9□□□□□ -0.97
CHD3-206ENST00000452447 BTN1A1Q13410 526 aa9□□□□□ -0.97
CHD3-206ENST00000452447 ZNF266Q14584 549 aa9□□□□□ -0.97
CHD3-206ENST00000452447 SSX7Q7RTT5 188 aa9□□□□□ -0.97
CHD3-206ENST00000452447 EIF4E3Q8N5X7 224 aaKnown RBP9□□□□□ -0.97
CHD3-206ENST00000452447 ZNRF2Q8NHG8 242 aa9□□□□□ -0.97
CHD3-206ENST00000452447 FXYD5Q96DB9 178 aa9□□□□□ -0.97
CHD3-206ENST00000452447 VGLL1Q99990 258 aa9□□□□□ -0.97
CHD3-206ENST00000452447 GSN-AS1Q9NRJ2 163 aa9□□□□□ -0.97
CHD3-206ENST00000452447 TNFSF18Q9UNG2 199 aa9□□□□□ -0.97
CHD3-206ENST00000452447 TMA7Q9Y2S6 64 aaKnown RBP9□□□□□ -0.97
CHD3-206ENST00000452447 LINC00588Q9Y4M8 146 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms