RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 GOLT1AQ6ZVE7 132 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 CCDC28AQ8IWP9 274 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 LYPD6BQ8NI32 183 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 VGLL1Q99990 258 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 SPATA25Q9BR10 227 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 AGPAT4-IT1Q9H0P7 198 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 PPP1R14DQ9NXH3 145 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 GNG13Q9P2W3 67 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 EPDR1Q9UM22 224 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 RPH3ALQ9UNE2 315 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 TP53TG1Q9Y2A0 90 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 K7EQM0 130 aa8.69□□□□□ -1.02
LINC00339-205ENST00000452322 IFNA1P01562 189 aa8.69□□□□□ -1.02
LINC00339-205ENST00000452322 CT45A10P0DMU9 189 aa8.69□□□□□ -1.02
LINC00339-205ENST00000452322 ATP5G3P48201 142 aa8.69□□□□□ -1.02
LINC00339-205ENST00000452322 SPINK13Q1W4C9 94 aa8.69□□□□□ -1.02
LINC00339-205ENST00000452322 DEFB135Q30KP9 77 aa8.69□□□□□ -1.02
LINC00339-205ENST00000452322 CYB561D1Q8N8Q1 229 aa8.69□□□□□ -1.02
LINC00339-205ENST00000452322 HIST1H2BAQ96A08 127 aa8.69□□□□□ -1.02
LINC00339-205ENST00000452322 ATG101Q9BSB4 218 aa8.69□□□□□ -1.02
LINC00339-205ENST00000452322 ZMAT4Q9H898 229 aa8.69□□□□□ -1.02
LINC00339-205ENST00000452322 ZNF492Q9P255 531 aa8.69□□□□□ -1.02
LINC00339-205ENST00000452322 NBEAL2Q6ZNJ1 2754 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 TRBV7-9A0A0J9YWB2 115 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 C11orf94C9JXX5 98 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 M0R2Z0 102 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 TSPOP30536 169 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 CDKN1BP46527 198 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 ZNF138P52744 262 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 FXYD7P58549 80 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 CSNK1G2-AS1Q8NCQ2 148 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 RNF183Q96D59 192 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 FAM19A4Q96LR4 140 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 RCHY1Q96PM5 261 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 TXNDC17Q9BRA2 123 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 XCL2Q9UBD3 114 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 COL7A1Q02388 2944 aa8.68□□□□□ -1.02
LINC00339-205ENST00000452322 FBLL1A6NHQ2 334 aaKnown RBP8.67□□□□□ -1.02
LINC00339-205ENST00000452322 F6UZH7 168 aa8.67□□□□□ -1.02
LINC00339-205ENST00000452322 PEX7O00628 323 aa8.67□□□□□ -1.02
LINC00339-205ENST00000452322 CRXO43186 299 aaPredicted RBP8.67□□□□□ -1.02
LINC00339-205ENST00000452322 BCL2P10415 239 aa8.67□□□□□ -1.02
LINC00339-205ENST00000452322 CRISP2P16562 243 aa8.67□□□□□ -1.02
LINC00339-205ENST00000452322 TAGLN2P37802 199 aaKnown RBP8.67□□□□□ -1.02
LINC00339-205ENST00000452322 LEPP41159 167 aa8.67□□□□□ -1.02
LINC00339-205ENST00000452322 TMEM75Q8N9X5 138 aa8.67□□□□□ -1.02
LINC00339-205ENST00000452322 IGF2BP2-AS1Q96M15 143 aa8.67□□□□□ -1.02
LINC00339-205ENST00000452322 OVOL2Q9BRP0 275 aa8.67□□□□□ -1.02
LINC00339-205ENST00000452322 LENEPQ9Y5L5 61 aa8.67□□□□□ -1.02
LINC00339-205ENST00000452322 TRAV8-1A0A0A6YYK1 113 aa8.66□□□□□ -1.02
LINC00339-205ENST00000452322 SPRY2O43597 315 aa8.66□□□□□ -1.02
LINC00339-205ENST00000452322 INSP01308 110 aa8.66□□□□□ -1.02
LINC00339-205ENST00000452322 NMBP08949 121 aa8.66□□□□□ -1.02
LINC00339-205ENST00000452322 DMRTA1Q5VZB9 504 aa8.66□□□□□ -1.02
LINC00339-205ENST00000452322 Q8TAT8 98 aa8.66□□□□□ -1.02
LINC00339-205ENST00000452322 RETNQ9HD89 108 aa8.66□□□□□ -1.02
LINC00339-205ENST00000452322 TRAV12-2A0A075B6T6 113 aa8.65□□□□□ -1.02
LINC00339-205ENST00000452322 KLLNB2CW77 178 aa8.65□□□□□ -1.02
LINC00339-205ENST00000452322 IGLV2-11P01706 119 aa8.65□□□□□ -1.02
LINC00339-205ENST00000452322 FLI1Q01543 452 aaPredicted RBP8.65□□□□□ -1.02
LINC00339-205ENST00000452322 MEF2BQ02080 365 aaPredicted RBP8.65□□□□□ -1.02
LINC00339-205ENST00000452322 ZNF705AQ6ZN79 300 aaPredicted RBP8.65□□□□□ -1.02
LINC00339-205ENST00000452322 ZNF767PQ75MW2 155 aa8.65□□□□□ -1.02
LINC00339-205ENST00000452322 C20orf144Q9BQM9 153 aa8.65□□□□□ -1.02
LINC00339-205ENST00000452322 VAX2Q9UIW0 290 aa8.65□□□□□ -1.02
LINC00339-205ENST00000452322 PSG8Q9UQ74 426 aa8.65□□□□□ -1.02
LINC00339-205ENST00000452322 LOC102723971A0A1B0GUV8 181 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 SCO2A0A1W2PP80 73 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 AKR1C3P42330 323 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 IFITM2Q01629 132 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 KIR3DS1Q14943 382 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 GFI1BQ5VTD9 330 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 ZFAND2AQ8N6M9 145 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 PCNPQ8WW12 178 aaKnown RBP8.64□□□□□ -1.03
LINC00339-205ENST00000452322 C11orf52Q96A22 123 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 FMC1Q96HJ9 113 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 SGK494Q96LW2 274 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 NDFIP1Q9BT67 221 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 GOLT1BQ9Y3E0 138 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 KLF12Q9Y4X4 402 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 TENM3Q9P273 2699 aa8.64□□□□□ -1.03
LINC00339-205ENST00000452322 TRBV6-1A0A0K0K1D8 114 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 C7orf71A4D174 169 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 RBFOX3A6NFN3 312 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 J3KRW8 73 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 PDE6DO43924 150 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 GPX1P07203 203 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 UBE2G1P62253 170 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 C1orf158Q8N1D5 194 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 TMEM256Q8N2U0 113 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 OR11H2Q8NH07 326 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 C2CD4CQ8TF44 421 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 LINC00479Q96M42 142 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 FAM210AQ96ND0 272 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 RARRES2Q99969 163 aa8.63□□□□□ -1.03
LINC00339-205ENST00000452322 TRAV34A0A0B4J273 112 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 S100A9P06702 114 aaKnown RBP8.62□□□□□ -1.03
LINC00339-205ENST00000452322 RBMY1A1P0DJD3 496 aaKnown RBP8.62□□□□□ -1.03
LINC00339-205ENST00000452322 RBMY1CP0DJD4 496 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 RAB14P61106 215 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms