RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 WDR61Q9GZS3 305 aaKnown RBP8.74□□□□□ -1.01
CPSF4-208ENST00000452047 PRELID1Q9Y255 219 aa8.74□□□□□ -1.01
CPSF4-208ENST00000452047 PRSS29PA6NIE9 313 aa8.73□□□□□ -1.01
CPSF4-208ENST00000452047 KLLNB2CW77 178 aa8.73□□□□□ -1.01
CPSF4-208ENST00000452047 ERCC8Q13216 396 aa8.73□□□□□ -1.01
CPSF4-208ENST00000452047 MIR17HGQ75NE6 70 aa8.73□□□□□ -1.01
CPSF4-208ENST00000452047 EXOC3-AS1Q8N2X6 119 aa8.73□□□□□ -1.01
CPSF4-208ENST00000452047 BLNKQ8WV28 456 aa8.73□□□□□ -1.01
CPSF4-208ENST00000452047 PYGO2Q9BRQ0 406 aa8.73□□□□□ -1.01
CPSF4-208ENST00000452047 TIMM9Q9Y5J7 89 aa8.73□□□□□ -1.01
CPSF4-208ENST00000452047 C7orf71A4D174 169 aa8.72□□□□□ -1.01
CPSF4-208ENST00000452047 SLC25A5P05141 298 aaKnown RBP8.72□□□□□ -1.01
CPSF4-208ENST00000452047 IFITM2Q01629 132 aa8.72□□□□□ -1.01
CPSF4-208ENST00000452047 C9orf47Q6ZRZ4 202 aa8.72□□□□□ -1.01
CPSF4-208ENST00000452047 CCDC28AQ8IWP9 274 aa8.72□□□□□ -1.01
CPSF4-208ENST00000452047 RNF141Q8WVD5 230 aa8.72□□□□□ -1.01
CPSF4-208ENST00000452047 MRPL32Q9BYC8 188 aaKnown RBP8.72□□□□□ -1.01
CPSF4-208ENST00000452047 AGPAT4-IT1Q9H0P7 198 aa8.72□□□□□ -1.01
CPSF4-208ENST00000452047 KCNIP2Q9NS61 270 aa8.72□□□□□ -1.01
CPSF4-208ENST00000452047 IGKV2-40A0A087WW87 121 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-208ENST00000452047 ZNF324O75467 553 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-208ENST00000452047 MPC2O95563 127 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 NUDT3O95989 172 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 IGKV2D-40P01614 121 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-208ENST00000452047 NBEAP1P0C6P0 100 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 CRISP2P16562 243 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 DAZ2Q13117 558 aaKnown RBP8.71□□□□□ -1.02
CPSF4-208ENST00000452047 BTN1A1Q13410 526 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 ICAM4Q14773 271 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 ZNRF2Q8NHG8 242 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 FXYD5Q96DB9 178 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 LINC00477Q96M19 166 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 ATP5SQ99766 215 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 ATG101Q9BSB4 218 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 OR51M1Q9H341 326 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 AAMDCQ9H7C9 122 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 HSPB11Q9Y547 144 aa8.71□□□□□ -1.02
CPSF4-208ENST00000452047 GAGE12BA1L429 117 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 SNURFLB1AK76 121 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 SSNA1O43805 119 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 GAGE7O76087 117 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 C1QBP02746 253 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 OR10J4P0C629 311 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 GAGE12FP0CL80 117 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 GAGE12GP0CL81 117 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 GAGE12IP0CL82 117 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 HOXA5P20719 270 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 ZFAND2AQ8N6M9 145 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 C11orf72Q8NBR9 251 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 ZNF503Q96F45 646 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 PHYHIPLQ96FC7 376 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 VGLL1Q99990 258 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 LINC00467Q9BRT7 94 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 PAXXQ9BUH6 204 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 FUT9Q9Y231 359 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 ALG5Q9Y673 324 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 DNAH11Q96DT5 4516 aa8.7□□□□□ -1.02
CPSF4-208ENST00000452047 TRAV26-1A0A087WT03 109 aa8.69□□□□□ -1.02
CPSF4-208ENST00000452047 C17orf112F2Z3M2 114 aa8.69□□□□□ -1.02
CPSF4-208ENST00000452047 NMBP08949 121 aa8.69□□□□□ -1.02
CPSF4-208ENST00000452047 PET100P0DJ07 73 aa8.69□□□□□ -1.02
CPSF4-208ENST00000452047 NKX2-5P52952 324 aaPredicted RBP8.69□□□□□ -1.02
CPSF4-208ENST00000452047 PRR9Q5T870 116 aa8.69□□□□□ -1.02
CPSF4-208ENST00000452047 FAM122CQ6P4D5 195 aa8.69□□□□□ -1.02
CPSF4-208ENST00000452047 Q6ZTI0 123 aa8.69□□□□□ -1.02
CPSF4-208ENST00000452047 ZNF680Q8NEM1 530 aa8.69□□□□□ -1.02
CPSF4-208ENST00000452047 MBD2Q9UBB5 411 aa8.69□□□□□ -1.02
CPSF4-208ENST00000452047 LINC00588Q9Y4M8 146 aa8.69□□□□□ -1.02
CPSF4-208ENST00000452047 DYNC1H1Q14204 4646 aaKnown RBP8.69□□□□□ -1.02
CPSF4-208ENST00000452047 M6PRP20645 277 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 RPL12P30050 165 aaKnown RBP8.68□□□□□ -1.02
CPSF4-208ENST00000452047 CCL18P55774 89 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 OR5I1Q13606 314 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 ANXA2RQ3ZCQ2 193 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 SOHLH1Q5JUK2 328 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 TMEM78Q5T7P6 136 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 C1orf134Q5TEV5 83 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 RXFP4Q8TDU9 374 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 GNPNAT1Q96EK6 184 aaPredicted RBP8.68□□□□□ -1.02
CPSF4-208ENST00000452047 C18orf15Q96N68 181 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 TMPRSS5Q9H3S3 457 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 GSN-AS1Q9NRJ2 163 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 ZNF492Q9P255 531 aa8.68□□□□□ -1.02
CPSF4-208ENST00000452047 NBDYA0A0U1RRE5 68 aa8.67□□□□□ -1.02
CPSF4-208ENST00000452047 H3BNG1 76 aa8.67□□□□□ -1.02
CPSF4-208ENST00000452047 OR7C2O60412 319 aa8.67□□□□□ -1.02
CPSF4-208ENST00000452047 GPX1P07203 203 aa8.67□□□□□ -1.02
CPSF4-208ENST00000452047 RNASE4P34096 147 aaKnown RBP8.67□□□□□ -1.02
CPSF4-208ENST00000452047 FFAR4Q5NUL3 377 aa8.67□□□□□ -1.02
CPSF4-208ENST00000452047 Q6ZQT7 251 aa8.67□□□□□ -1.02
CPSF4-208ENST00000452047 SSX7Q7RTT5 188 aa8.67□□□□□ -1.02
CPSF4-208ENST00000452047 EIF4E3Q8N5X7 224 aaKnown RBP8.67□□□□□ -1.02
CPSF4-208ENST00000452047 Q8TAT8 98 aa8.67□□□□□ -1.02
CPSF4-208ENST00000452047 HYLS1Q96M11 299 aa8.67□□□□□ -1.02
CPSF4-208ENST00000452047 SMIM3Q9BZL3 60 aa8.67□□□□□ -1.02
CPSF4-208ENST00000452047 MUC4Q99102 2169 aa8.66□□□□□ -1.02
CPSF4-208ENST00000452047 TRBV7-9A0A0J9YWB2 115 aa8.66□□□□□ -1.02
CPSF4-208ENST00000452047 A0A0J9YY99 117 aa8.66□□□□□ -1.02
CPSF4-208ENST00000452047 RBAKDNA6NC62 111 aa8.66□□□□□ -1.02
CPSF4-208ENST00000452047 ZNF138P52744 262 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms