RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	RPL12	P30050	165 aa	Known RBP	11.28	□□□□□ -0.6
SGCE-208	ENST00000450385	TAS2R45	P59539	299 aa		11.28	□□□□□ -0.6
SGCE-208	ENST00000450385	ANXA2R	Q3ZCQ2	193 aa		11.28	□□□□□ -0.6
SGCE-208	ENST00000450385	TMEM78	Q5T7P6	136 aa		11.28	□□□□□ -0.6
SGCE-208	ENST00000450385	ARL6IP6	Q8N6S5	226 aa		11.28	□□□□□ -0.6
SGCE-208	ENST00000450385	RNF141	Q8WVD5	230 aa		11.28	□□□□□ -0.6
SGCE-208	ENST00000450385	C18orf15	Q96N68	181 aa		11.28	□□□□□ -0.6
SGCE-208	ENST00000450385	TRAV12-3	A0A0B4J271	114 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	C7orf71	A4D174	169 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	RBAKDN	A6NC62	111 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385		M0R3E3	92 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	ZNF324	O75467	553 aa	Predicted RBP	11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	PYY	P10082	97 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	CSN1S1	P47710	185 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	CCL18	P55774	89 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	ICAM4	Q14773	271 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	GCSAML	Q5JQS6	135 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385		Q6ZR54	194 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	BLNK	Q8WV28	456 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	ATG101	Q9BSB4	218 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	AGPAT4-IT1	Q9H0P7	198 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	LENEP	Q9Y5L5	61 aa		11.27	□□□□□ -0.61
SGCE-208	ENST00000450385	GPX1	P07203	203 aa		11.26	□□□□□ -0.61
SGCE-208	ENST00000450385	FCN2	Q15485	313 aa		11.26	□□□□□ -0.61
SGCE-208	ENST00000450385	KHDC3L	Q587J8	217 aa		11.26	□□□□□ -0.61
SGCE-208	ENST00000450385	MIR17HG	Q75NE6	70 aa		11.26	□□□□□ -0.61
SGCE-208	ENST00000450385	RXFP4	Q8TDU9	374 aa		11.26	□□□□□ -0.61
SGCE-208	ENST00000450385	ASB13	Q8WXK3	278 aa		11.26	□□□□□ -0.61
SGCE-208	ENST00000450385	FXYD5	Q96DB9	178 aa		11.26	□□□□□ -0.61
SGCE-208	ENST00000450385	KIR3DS1	Q14943	382 aa		11.25	□□□□□ -0.61
SGCE-208	ENST00000450385	IBA57	Q5T440	356 aa	Known RBP	11.25	□□□□□ -0.61
SGCE-208	ENST00000450385	EXOC3-AS1	Q8N2X6	119 aa		11.25	□□□□□ -0.61
SGCE-208	ENST00000450385	EIF4E3	Q8N5X7	224 aa	Known RBP	11.25	□□□□□ -0.61
SGCE-208	ENST00000450385	ZNF492	Q9P255	531 aa		11.25	□□□□□ -0.61
SGCE-208	ENST00000450385	OR7C2	O60412	319 aa		11.24	□□□□□ -0.61
SGCE-208	ENST00000450385	PTTG1	O95997	202 aa		11.24	□□□□□ -0.61
SGCE-208	ENST00000450385	M6PR	P20645	277 aa		11.24	□□□□□ -0.61
SGCE-208	ENST00000450385	FFAR4	Q5NUL3	377 aa		11.24	□□□□□ -0.61
SGCE-208	ENST00000450385	PQLC2	Q6ZP29	291 aa		11.24	□□□□□ -0.61
SGCE-208	ENST00000450385	TMED6	Q8WW62	240 aa		11.24	□□□□□ -0.61
SGCE-208	ENST00000450385	DNAH2	Q9P225	4427 aa		11.23	□□□□□ -0.61
SGCE-208	ENST00000450385	ZNF138	P52744	262 aa		11.23	□□□□□ -0.61
SGCE-208	ENST00000450385	ERCC8	Q13216	396 aa		11.23	□□□□□ -0.61
SGCE-208	ENST00000450385	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.23	□□□□□ -0.61
SGCE-208	ENST00000450385	FAM74A1	Q5RGS3	127 aa		11.23	□□□□□ -0.61
SGCE-208	ENST00000450385	MBD2	Q9UBB5	411 aa		11.23	□□□□□ -0.61
SGCE-208	ENST00000450385	DNAH17	Q9UFH2	4485 aa		11.22	□□□□□ -0.61
SGCE-208	ENST00000450385	NUDT3	O95989	172 aa		11.22	□□□□□ -0.61
SGCE-208	ENST00000450385	ZNF266	Q14584	549 aa		11.22	□□□□□ -0.61
SGCE-208	ENST00000450385	FAM122C	Q6P4D5	195 aa		11.22	□□□□□ -0.61
SGCE-208	ENST00000450385	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.22	□□□□□ -0.61
SGCE-208	ENST00000450385	FAT2	Q9NYQ8	4349 aa		11.22	□□□□□ -0.61
SGCE-208	ENST00000450385		A0A1W2PPV4	95 aa		11.21	□□□□□ -0.61
SGCE-208	ENST00000450385	PRSS29P	A6NIE9	313 aa		11.21	□□□□□ -0.61
SGCE-208	ENST00000450385		J3KRW8	73 aa		11.21	□□□□□ -0.61
SGCE-208	ENST00000450385		M0R2N4	97 aa		11.21	□□□□□ -0.61
SGCE-208	ENST00000450385	RTL8C	O15255	209 aa		11.21	□□□□□ -0.61
SGCE-208	ENST00000450385	OR10J4	P0C629	311 aa		11.21	□□□□□ -0.61
SGCE-208	ENST00000450385	RNASE4	P34096	147 aa	Known RBP	11.21	□□□□□ -0.61
SGCE-208	ENST00000450385	RAN	P62826	216 aa	Known RBP	11.21	□□□□□ -0.61
SGCE-208	ENST00000450385	SLA	Q13239	276 aa		11.21	□□□□□ -0.61
SGCE-208	ENST00000450385	C1orf134	Q5TEV5	83 aa		11.21	□□□□□ -0.61
SGCE-208	ENST00000450385	ZFAND2A	Q8N6M9	145 aa		11.21	□□□□□ -0.61
SGCE-208	ENST00000450385	VGLL1	Q99990	258 aa		11.21	□□□□□ -0.61
SGCE-208	ENST00000450385	MUC4	Q99102	2169 aa		11.21	□□□□□ -0.62
SGCE-208	ENST00000450385	GAGE12B	A1L429	117 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	RGS13	O14921	159 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	GAGE7	O76087	117 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	GAGE12F	P0CL80	117 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	GAGE12G	P0CL81	117 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	GAGE12I	P0CL82	117 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	PRB4	P10163	310 aa	Predicted RBP	11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	BTF3	P20290	206 aa	Known RBP	11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	TCL1A	P56279	114 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	UBE2L3	P68036	154 aa	Known RBP	11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	CD300C	Q08708	224 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	OR5I1	Q13606	314 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	C11orf72	Q8NBR9	251 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	ZNRF2	Q8NHG8	242 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385		Q9H3A6	140 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	OTOR	Q9NRC9	128 aa		11.2	□□□□□ -0.62
SGCE-208	ENST00000450385	TRGV2	A0A075B6R0	118 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	IGHV1OR15-1	A0A075B7D0	117 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.19	□□□□□ -0.62
SGCE-208	ENST00000450385		A0A1B0GVY2	172 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	DIRC3	C9JPN6	131 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	SPINK4	O60575	86 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	IGKV2D-40	P01614	121 aa	Predicted RBP	11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	MB	P02144	154 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	SERF2	P84101	59 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	OR2G3	Q8NGZ4	309 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	PHYHIPL	Q96FC7	376 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	MED28	Q9H204	178 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	GSN-AS1	Q9NRJ2	163 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	TP53TG3	Q9ULZ0	132 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	ALG5	Q9Y673	324 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	PKHD1	P08F94	4074 aa		11.19	□□□□□ -0.62
SGCE-208	ENST00000450385	IGLV2-18	A0A075B6J9	118 aa		11.18	□□□□□ -0.62
SGCE-208	ENST00000450385	TRAV26-1	A0A087WT03	109 aa		11.18	□□□□□ -0.62
SGCE-208	ENST00000450385	BTN1A1	Q13410	526 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms