RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PDE6HQ13956 83 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 GBGT1Q8N5D6 347 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 FAM24BQ8N5W8 94 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 BLNKQ8WV28 456 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 ISOC2Q96AB3 205 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 FXYD5Q96DB9 178 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 OVOL2Q9BRP0 275 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 SLC50A1Q9BRV3 221 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 MS4A6AQ9H2W1 248 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 CLEC5AQ9NY25 188 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 DYNC2H1Q8NCM8 4307 aaKnown RBP12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 ZNF253O75346 499 aa12.59□□□□□ -0.39
PRPF40A-204ENST00000450303 RPL35AP18077 110 aaKnown RBP12.59□□□□□ -0.39
PRPF40A-204ENST00000450303 S100PP25815 95 aa12.59□□□□□ -0.39
PRPF40A-204ENST00000450303 CMC4P56277 68 aaPredicted RBP12.59□□□□□ -0.39
PRPF40A-204ENST00000450303 ZNF124Q15973 351 aa12.59□□□□□ -0.39
PRPF40A-204ENST00000450303 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.59□□□□□ -0.39
PRPF40A-204ENST00000450303 WFDC3Q8IUB2 231 aa12.59□□□□□ -0.39
PRPF40A-204ENST00000450303 APRG1Q8IVJ8 170 aa12.59□□□□□ -0.39
PRPF40A-204ENST00000450303 ZNF503Q96F45 646 aa12.59□□□□□ -0.39
PRPF40A-204ENST00000450303 C16orf92Q96LL3 132 aa12.59□□□□□ -0.39
PRPF40A-204ENST00000450303 ZNF586Q9NXT0 402 aa12.59□□□□□ -0.39
PRPF40A-204ENST00000450303 TRBV19A0A075B6N1 114 aa12.58□□□□□ -0.4
PRPF40A-204ENST00000450303 S100A6P06703 90 aa12.58□□□□□ -0.4
PRPF40A-204ENST00000450303 ANAPC16Q96DE5 110 aa12.58□□□□□ -0.4
PRPF40A-204ENST00000450303 AAMDCQ9H7C9 122 aa12.58□□□□□ -0.4
PRPF40A-204ENST00000450303 CSMD3Q7Z407 3707 aa12.58□□□□□ -0.4
PRPF40A-204ENST00000450303 STARD9Q9P2P6 4700 aa12.57□□□□□ -0.4
PRPF40A-204ENST00000450303 K7EQG2 157 aa12.57□□□□□ -0.4
PRPF40A-204ENST00000450303 ISLRO14498 428 aa12.57□□□□□ -0.4
PRPF40A-204ENST00000450303 SNRPD3P62318 126 aaKnown RBP12.57□□□□□ -0.4
PRPF40A-204ENST00000450303 LYPD1Q8N2G4 141 aa12.57□□□□□ -0.4
PRPF40A-204ENST00000450303 H7BYZ3 331 aa12.56□□□□□ -0.4
PRPF40A-204ENST00000450303 PPP1R2P9O14990 202 aa12.56□□□□□ -0.4
PRPF40A-204ENST00000450303 SNRPCP09234 159 aaKnown RBP12.56□□□□□ -0.4
PRPF40A-204ENST00000450303 ATP5G3P48201 142 aa12.56□□□□□ -0.4
PRPF40A-204ENST00000450303 APOC4P55056 127 aa12.56□□□□□ -0.4
PRPF40A-204ENST00000450303 RPL23P62829 140 aaKnown RBP12.56□□□□□ -0.4
PRPF40A-204ENST00000450303 DEFB135Q30KP9 77 aa12.56□□□□□ -0.4
PRPF40A-204ENST00000450303 DCANP1Q8TF63 244 aa12.56□□□□□ -0.4
PRPF40A-204ENST00000450303 BTF3L4Q96K17 158 aa12.56□□□□□ -0.4
PRPF40A-204ENST00000450303 C17orf77Q96MU5 243 aa12.56□□□□□ -0.4
PRPF40A-204ENST00000450303 ZNF331Q9NQX6 463 aaPredicted RBP12.56□□□□□ -0.4
PRPF40A-204ENST00000450303 LCE6AA0A183 80 aa12.55□□□□□ -0.4
PRPF40A-204ENST00000450303 H3BTX0 84 aa12.55□□□□□ -0.4
PRPF40A-204ENST00000450303 RPS10P46783 165 aaKnown RBP12.55□□□□□ -0.4
PRPF40A-204ENST00000450303 RANP62826 216 aaKnown RBP12.55□□□□□ -0.4
PRPF40A-204ENST00000450303 A0A1W2PRE2 83 aa12.54□□□□□ -0.4
PRPF40A-204ENST00000450303 SPRY2O43597 315 aa12.54□□□□□ -0.4
PRPF40A-204ENST00000450303 KCNIP4Q6PIL6 250 aa12.54□□□□□ -0.4
PRPF40A-204ENST00000450303 YPEL4Q96NS1 127 aa12.54□□□□□ -0.4
PRPF40A-204ENST00000450303 Q9H3A6 140 aa12.54□□□□□ -0.4
PRPF40A-204ENST00000450303 SAV1Q9H4B6 383 aaPredicted RBP12.54□□□□□ -0.4
PRPF40A-204ENST00000450303 MAP6D1Q9H9H5 199 aa12.54□□□□□ -0.4
PRPF40A-204ENST00000450303 SOCS3O14543 225 aa12.53□□□□□ -0.4
PRPF40A-204ENST00000450303 NDUFB4O95168 129 aa12.53□□□□□ -0.4
PRPF40A-204ENST00000450303 CSN1S1P47710 185 aa12.53□□□□□ -0.4
PRPF40A-204ENST00000450303 ELOBQ15370 118 aa12.53□□□□□ -0.4
PRPF40A-204ENST00000450303 IL17DQ8TAD2 202 aa12.53□□□□□ -0.4
PRPF40A-204ENST00000450303 CMTM2Q8TAZ6 248 aa12.53□□□□□ -0.4
PRPF40A-204ENST00000450303 C11orf52Q96A22 123 aa12.53□□□□□ -0.4
PRPF40A-204ENST00000450303 OTORQ9NRC9 128 aa12.53□□□□□ -0.4
PRPF40A-204ENST00000450303 RYR2Q92736 4967 aa12.52□□□□□ -0.4
PRPF40A-204ENST00000450303 A0A0J9YWU9 116 aa12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 PGPA6NDG6 321 aa12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 SLC17A3O00476 420 aa12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 UBE2CO00762 179 aa12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 ZNF688P0C7X2 276 aa12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 PSG3Q16557 428 aa12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 Q6ZWC4 215 aa12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 ZFP82Q8N141 532 aa12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 MRPL53Q96EL3 112 aaKnown RBP12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 FAM210BQ96KR6 192 aa12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 YTHDF2Q9Y5A9 579 aaKnown RBP12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 LY96Q9Y6Y9 160 aa12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 URGCP-MRPS24S4R325 110 aa12.52□□□□□ -0.41
PRPF40A-204ENST00000450303 SACSQ9NZJ4 4579 aa12.51□□□□□ -0.41
PRPF40A-204ENST00000450303 KIR2DL5BA0A0G2JN68 375 aa12.51□□□□□ -0.41
PRPF40A-204ENST00000450303 KIR2DL5BA0A0G2JPC4 375 aa12.51□□□□□ -0.41
PRPF40A-204ENST00000450303 DEFB131AP59861 70 aa12.51□□□□□ -0.41
PRPF40A-204ENST00000450303 SUMO1P63165 101 aaKnown RBP12.51□□□□□ -0.41
PRPF40A-204ENST00000450303 KIR2DL5AQ8N109 375 aa12.51□□□□□ -0.41
PRPF40A-204ENST00000450303 ZNF738Q8NE65 137 aa12.51□□□□□ -0.41
PRPF40A-204ENST00000450303 KIR2DL5BQ8NHK3 375 aa12.51□□□□□ -0.41
PRPF40A-204ENST00000450303 RNF183Q96D59 192 aa12.51□□□□□ -0.41
PRPF40A-204ENST00000450303 TRBV24-1A0A075B6N3 115 aa12.5□□□□□ -0.41
PRPF40A-204ENST00000450303 TRAV8-2A0A0B4J237 113 aa12.5□□□□□ -0.41
PRPF40A-204ENST00000450303 SCO2A0A1W2PP80 73 aa12.5□□□□□ -0.41
PRPF40A-204ENST00000450303 C9JCJ5 164 aa12.5□□□□□ -0.41
PRPF40A-204ENST00000450303 SLC25A5P05141 298 aaKnown RBP12.5□□□□□ -0.41
PRPF40A-204ENST00000450303 PSMG4Q5JS54 123 aa12.5□□□□□ -0.41
PRPF40A-204ENST00000450303 IGFL4Q6B9Z1 124 aa12.5□□□□□ -0.41
PRPF40A-204ENST00000450303 EXOC3-AS1Q8N2X6 119 aa12.5□□□□□ -0.41
PRPF40A-204ENST00000450303 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
PRPF40A-204ENST00000450303 TCEAL7Q9BRU2 100 aa12.5□□□□□ -0.41
PRPF40A-204ENST00000450303 TP53TG1Q9Y2A0 90 aa12.5□□□□□ -0.41
PRPF40A-204ENST00000450303 LINC01551Q86U37 167 aa12.49□□□□□ -0.41
PRPF40A-204ENST00000450303 RNF182Q8N6D2 247 aa12.49□□□□□ -0.41
PRPF40A-204ENST00000450303 C5orf17Q8NAS9 161 aa12.49□□□□□ -0.41
PRPF40A-204ENST00000450303 C2CD4CQ8TF44 421 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 363.2 ms