RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 WFDC1Q9HC57 220 aa12.42□□□□□ -0.42
FAM3A-216ENST00000449971 OR7C2O60412 319 aa12.41□□□□□ -0.42
FAM3A-216ENST00000449971 P0DMU3 169 aa12.41□□□□□ -0.42
FAM3A-216ENST00000449971 FAM231AP0DMU4 169 aa12.41□□□□□ -0.42
FAM3A-216ENST00000449971 FAM231CP0DMU5 169 aa12.41□□□□□ -0.42
FAM3A-216ENST00000449971 FAM122CQ6P4D5 195 aa12.41□□□□□ -0.42
FAM3A-216ENST00000449971 C16orf74Q96GX8 76 aa12.41□□□□□ -0.42
FAM3A-216ENST00000449971 FAM210BQ96KR6 192 aa12.41□□□□□ -0.42
FAM3A-216ENST00000449971 ODF3Q96PU9 254 aa12.41□□□□□ -0.42
FAM3A-216ENST00000449971 TRAV12-3A0A0B4J271 114 aa12.4□□□□□ -0.42
FAM3A-216ENST00000449971 PLAC8L1A1L4L8 177 aa12.4□□□□□ -0.42
FAM3A-216ENST00000449971 ZNF493Q6ZR52 646 aa12.4□□□□□ -0.42
FAM3A-216ENST00000449971 CCDC28AQ8IWP9 274 aa12.4□□□□□ -0.42
FAM3A-216ENST00000449971 FXYD5Q96DB9 178 aa12.4□□□□□ -0.42
FAM3A-216ENST00000449971 LINC00477Q96M19 166 aa12.4□□□□□ -0.42
FAM3A-216ENST00000449971 AGPAT4-IT1Q9H0P7 198 aa12.4□□□□□ -0.42
FAM3A-216ENST00000449971 UBE2DNLQ8IWF7 75 aa12.39□□□□□ -0.43
FAM3A-216ENST00000449971 TIMM8BQ9Y5J9 83 aaPredicted RBP12.39□□□□□ -0.43
FAM3A-216ENST00000449971 RANP62826 216 aaKnown RBP12.38□□□□□ -0.43
FAM3A-216ENST00000449971 TMEM263Q8WUH6 116 aaKnown RBP12.38□□□□□ -0.43
FAM3A-216ENST00000449971 NOP10Q9NPE3 64 aaKnown RBP12.38□□□□□ -0.43
FAM3A-216ENST00000449971 IGKV2-40A0A087WW87 121 aaPredicted RBP12.37□□□□□ -0.43
FAM3A-216ENST00000449971 IGKV2D-40P01614 121 aaPredicted RBP12.37□□□□□ -0.43
FAM3A-216ENST00000449971 SLC25A5P05141 298 aaKnown RBP12.37□□□□□ -0.43
FAM3A-216ENST00000449971 TAS2R45P59539 299 aa12.37□□□□□ -0.43
FAM3A-216ENST00000449971 UBE2L3P68036 154 aaKnown RBP12.37□□□□□ -0.43
FAM3A-216ENST00000449971 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
FAM3A-216ENST00000449971 KHDC3LQ587J8 217 aa12.37□□□□□ -0.43
FAM3A-216ENST00000449971 TMEM78Q5T7P6 136 aa12.37□□□□□ -0.43
FAM3A-216ENST00000449971 TMEM88Q6PEY1 159 aa12.37□□□□□ -0.43
FAM3A-216ENST00000449971 RNASE8Q8TDE3 154 aaKnown RBP12.37□□□□□ -0.43
FAM3A-216ENST00000449971 ZNF503Q96F45 646 aa12.37□□□□□ -0.43
FAM3A-216ENST00000449971 PHYHIPLQ96FC7 376 aa12.37□□□□□ -0.43
FAM3A-216ENST00000449971 A0A1W2PPV4 95 aa12.36□□□□□ -0.43
FAM3A-216ENST00000449971 C7orf71A4D174 169 aa12.36□□□□□ -0.43
FAM3A-216ENST00000449971 CBY3A6NI87 242 aa12.36□□□□□ -0.43
FAM3A-216ENST00000449971 F5H768 121 aa12.36□□□□□ -0.43
FAM3A-216ENST00000449971 EIF3GO75821 320 aaKnown RBP eCLIP12.36□□□□□ -0.43
FAM3A-216ENST00000449971 RNASE4P34096 147 aaKnown RBP12.36□□□□□ -0.43
FAM3A-216ENST00000449971 C9orf47Q6ZRZ4 202 aa12.36□□□□□ -0.43
FAM3A-216ENST00000449971 VGLL1Q99990 258 aa12.36□□□□□ -0.43
FAM3A-216ENST00000449971 ATP5G1P05496 136 aa12.35□□□□□ -0.43
FAM3A-216ENST00000449971 GPX1P07203 203 aa12.35□□□□□ -0.43
FAM3A-216ENST00000449971 M6PRP20645 277 aa12.35□□□□□ -0.43
FAM3A-216ENST00000449971 CSN1S1P47710 185 aa12.35□□□□□ -0.43
FAM3A-216ENST00000449971 ATP5G3P48201 142 aa12.35□□□□□ -0.43
FAM3A-216ENST00000449971 CD300CQ08708 224 aa12.35□□□□□ -0.43
FAM3A-216ENST00000449971 LGALS9BQ3B8N2 356 aa12.35□□□□□ -0.43
FAM3A-216ENST00000449971 Q5BKY6 102 aa12.35□□□□□ -0.43
FAM3A-216ENST00000449971 FAM19A4Q96LR4 140 aa12.35□□□□□ -0.43
FAM3A-216ENST00000449971 PYGO2Q9BRQ0 406 aa12.35□□□□□ -0.43
FAM3A-216ENST00000449971 Q9H3A6 140 aa12.35□□□□□ -0.43
FAM3A-216ENST00000449971 SNURFLB1AK76 121 aa12.34□□□□□ -0.43
FAM3A-216ENST00000449971 GIPP09681 153 aaPredicted RBP12.34□□□□□ -0.43
FAM3A-216ENST00000449971 RAB2AP61019 212 aa12.34□□□□□ -0.43
FAM3A-216ENST00000449971 BTN1A1Q13410 526 aa12.34□□□□□ -0.43
FAM3A-216ENST00000449971 RGS21Q2M5E4 152 aa12.34□□□□□ -0.43
FAM3A-216ENST00000449971 LYPD1Q8N2G4 141 aa12.34□□□□□ -0.43
FAM3A-216ENST00000449971 HSD17B11Q8NBQ5 300 aa12.34□□□□□ -0.43
FAM3A-216ENST00000449971 AQP10Q96PS8 301 aa12.34□□□□□ -0.43
FAM3A-216ENST00000449971 KLLNB2CW77 178 aa12.33□□□□□ -0.44
FAM3A-216ENST00000449971 CRISP2P16562 243 aa12.33□□□□□ -0.44
FAM3A-216ENST00000449971 ZNF266Q14584 549 aa12.33□□□□□ -0.44
FAM3A-216ENST00000449971 SOHLH1Q5JUK2 328 aa12.33□□□□□ -0.44
FAM3A-216ENST00000449971 MAPKAPK5-AS1Q8N8E1 139 aa12.33□□□□□ -0.44
FAM3A-216ENST00000449971 OR10G4Q8NGN3 311 aa12.33□□□□□ -0.44
FAM3A-216ENST00000449971 OR10G9Q8NGN4 311 aa12.33□□□□□ -0.44
FAM3A-216ENST00000449971 OR10G7Q8NGN6 311 aa12.33□□□□□ -0.44
FAM3A-216ENST00000449971 ZNF492Q9P255 531 aa12.33□□□□□ -0.44
FAM3A-216ENST00000449971 LRP1BQ9NZR2 4599 aa12.32□□□□□ -0.44
FAM3A-216ENST00000449971 C16orf90A8MZG2 172 aa12.32□□□□□ -0.44
FAM3A-216ENST00000449971 ZNF324O75467 553 aaPredicted RBP12.32□□□□□ -0.44
FAM3A-216ENST00000449971 NMBP08949 121 aa12.32□□□□□ -0.44
FAM3A-216ENST00000449971 ZNF138P52744 262 aa12.32□□□□□ -0.44
FAM3A-216ENST00000449971 INO80EQ8NBZ0 244 aaPredicted RBP12.32□□□□□ -0.44
FAM3A-216ENST00000449971 ASB13Q8WXK3 278 aa12.32□□□□□ -0.44
FAM3A-216ENST00000449971 HYLS1Q96M11 299 aa12.32□□□□□ -0.44
FAM3A-216ENST00000449971 GAGE12BA1L429 117 aa12.31□□□□□ -0.44
FAM3A-216ENST00000449971 HMGB3O15347 200 aaKnown RBP12.31□□□□□ -0.44
FAM3A-216ENST00000449971 GAGE7O76087 117 aa12.31□□□□□ -0.44
FAM3A-216ENST00000449971 GAGE12FP0CL80 117 aa12.31□□□□□ -0.44
FAM3A-216ENST00000449971 GAGE12GP0CL81 117 aa12.31□□□□□ -0.44
FAM3A-216ENST00000449971 GAGE12IP0CL82 117 aa12.31□□□□□ -0.44
FAM3A-216ENST00000449971 PQLC2Q6ZP29 291 aa12.31□□□□□ -0.44
FAM3A-216ENST00000449971 ZFAND2AQ8N6M9 145 aa12.31□□□□□ -0.44
FAM3A-216ENST00000449971 C15orf53Q8NAA6 179 aa12.31□□□□□ -0.44
FAM3A-216ENST00000449971 Q8TAT8 98 aa12.31□□□□□ -0.44
FAM3A-216ENST00000449971 RXFP4Q8TDU9 374 aa12.31□□□□□ -0.44
FAM3A-216ENST00000449971 FXYD6-FXYD2A0A087WZ82 144 aa12.3□□□□□ -0.44
FAM3A-216ENST00000449971 PGPA6NDG6 321 aa12.3□□□□□ -0.44
FAM3A-216ENST00000449971 PRR9Q5T870 116 aa12.3□□□□□ -0.44
FAM3A-216ENST00000449971 EIF4E3Q8N5X7 224 aaKnown RBP12.3□□□□□ -0.44
FAM3A-216ENST00000449971 CMTM2Q8TAZ6 248 aa12.3□□□□□ -0.44
FAM3A-216ENST00000449971 OTORQ9NRC9 128 aa12.3□□□□□ -0.44
FAM3A-216ENST00000449971 GSN-AS1Q9NRJ2 163 aa12.3□□□□□ -0.44
FAM3A-216ENST00000449971 RBAKDNA6NC62 111 aa12.29□□□□□ -0.44
FAM3A-216ENST00000449971 DIRC3C9JPN6 131 aa12.29□□□□□ -0.44
FAM3A-216ENST00000449971 RGS13O14921 159 aa12.29□□□□□ -0.44
FAM3A-216ENST00000449971 NUDT3O95989 172 aa12.29□□□□□ -0.44
FAM3A-216ENST00000449971 ATP6V0CP27449 155 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms