RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 S100A7AQ86SG5 101 aa4.93□□□□□ -1.62
LINC01961-201ENST00000449954 C8orf59Q8N0T1 100 aaPredicted RBP4.93□□□□□ -1.62
LINC01961-201ENST00000449954 OR10P1Q8NGE3 313 aa4.93□□□□□ -1.62
LINC01961-201ENST00000449954 OR1S1Q8NH92 325 aa4.93□□□□□ -1.62
LINC01961-201ENST00000449954 ZNF486Q96H40 463 aaPredicted RBP4.93□□□□□ -1.62
LINC01961-201ENST00000449954 SHANK2-AS3Q9BTD1 123 aa4.93□□□□□ -1.62
LINC01961-201ENST00000449954 GTSF1LQ9H1H1 148 aa4.93□□□□□ -1.62
LINC01961-201ENST00000449954 OR51M1Q9H341 326 aa4.93□□□□□ -1.62
LINC01961-201ENST00000449954 ZNF331Q9NQX6 463 aaPredicted RBP4.93□□□□□ -1.62
LINC01961-201ENST00000449954 RNF24Q9Y225 148 aa4.93□□□□□ -1.62
LINC01961-201ENST00000449954 A0A087WYN8 130 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 C3orf85A0A1B0GTC6 90 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 KLLNB2CW77 178 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 TRIAP1O43715 76 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 B3GALNT1O75752 331 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 OR10J4P0C629 311 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 TSPAN5P62079 268 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 PRR4Q16378 134 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 ATRAIDQ6UW56 229 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 DPPA3Q6W0C5 159 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 LGI3Q8N145 548 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 RASL10AQ92737 203 aa4.92□□□□□ -1.62
LINC01961-201ENST00000449954 PGAM2P15259 253 aa4.91□□□□□ -1.62
LINC01961-201ENST00000449954 GATA1P15976 413 aaPredicted RBP4.91□□□□□ -1.62
LINC01961-201ENST00000449954 RCVRNP35243 200 aa4.91□□□□□ -1.62
LINC01961-201ENST00000449954 MEF2DQ14814 521 aa4.91□□□□□ -1.62
LINC01961-201ENST00000449954 OR10G9Q8NGN4 311 aa4.91□□□□□ -1.62
LINC01961-201ENST00000449954 SLC25A38Q96DW6 304 aa4.91□□□□□ -1.62
LINC01961-201ENST00000449954 PRADC1Q9BSG0 188 aa4.91□□□□□ -1.62
LINC01961-201ENST00000449954 C8orf4Q9NR00 106 aa4.91□□□□□ -1.62
LINC01961-201ENST00000449954 PLAC8Q9NZF1 115 aa4.91□□□□□ -1.62
LINC01961-201ENST00000449954 PSORS1C2Q9UIG4 136 aa4.91□□□□□ -1.62
LINC01961-201ENST00000449954 TP53TG3Q9ULZ0 132 aa4.91□□□□□ -1.62
LINC01961-201ENST00000449954 HIGD1AQ9Y241 93 aa4.91□□□□□ -1.62
LINC01961-201ENST00000449954 SMIM30A4D0T7 59 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 PRAC2D3DTV9 90 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 H7C1H1 209 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 PIGPP57054 158 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 BTN1A1Q13410 526 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 OPCMLQ14982 345 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 RHOHQ15669 191 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 ACOT7LQ6ZUV0 252 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 ZNF664Q8N3J9 261 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 DHRSXQ8N5I4 330 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 OR4C5Q8NGB2 326 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 SPACA4Q8TDM5 124 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 DTD1Q8TEA8 209 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 DPH3Q96FX2 82 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 MGLLQ99685 303 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 SPXQ9BT56 116 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 C1orf43Q9BWL3 253 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 TMEM222Q9H0R3 208 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 PXMP4Q9Y6I8 212 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 URGCP-MRPS24S4R325 110 aa4.9□□□□□ -1.63
LINC01961-201ENST00000449954 TRDV1A0A1B0GX56 115 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 PMS2P5A8MQ11 134 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 USP17L23D6RBM5 183 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 PTGES3LE9PB15 166 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 NMBP08949 121 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 OR4E1P0C645 316 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 Q0VG73 95 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 ELOBQ15370 118 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 CCDC71LQ8N9Z2 235 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 OR4D10Q8NGI6 311 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 Q8TAT8 98 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 UBE2WQ96B02 151 aa4.89□□□□□ -1.63
LINC01961-201ENST00000449954 A0A087WWC5 75 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 TRBV6-4A0A1B0GX49 114 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 MRPS12O15235 138 aaKnown RBP4.88□□□□□ -1.63
LINC01961-201ENST00000449954 HYPMO75409 117 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 CDS2O95674 445 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 GPX1P07203 203 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 PRSS1P07477 247 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 GNAO1P09471 354 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 ANXA7P20073 488 aaKnown RBP4.88□□□□□ -1.63
LINC01961-201ENST00000449954 HLA-DMAP28067 261 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 RNASE4P34096 147 aaKnown RBP4.88□□□□□ -1.63
LINC01961-201ENST00000449954 POLR2GP62487 172 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC01961-201ENST00000449954 RAB11AP62491 216 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 RAB31Q13636 194 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 GUK1Q16774 197 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 SP6Q3SY56 376 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 C22orf42Q6IC83 251 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 CFAP161Q6P656 301 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 OR52I2Q8NH67 350 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 GTSF1Q8WW33 167 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 FAM19A4Q96LR4 140 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 NDUFB11Q9NX14 153 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 SCN3BQ9NY72 215 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 COPZ2Q9P299 210 aa4.88□□□□□ -1.63
LINC01961-201ENST00000449954 FBLL1A6NHQ2 334 aaKnown RBP4.87□□□□□ -1.63
LINC01961-201ENST00000449954 CIDEAO60543 219 aa4.87□□□□□ -1.63
LINC01961-201ENST00000449954 OR5G3P0C626 314 aa4.87□□□□□ -1.63
LINC01961-201ENST00000449954 SULT1A3P0DMM9 295 aa4.87□□□□□ -1.63
LINC01961-201ENST00000449954 SULT1A4P0DMN0 295 aa4.87□□□□□ -1.63
LINC01961-201ENST00000449954 CRISP2P16562 243 aa4.87□□□□□ -1.63
LINC01961-201ENST00000449954 PLP1P60201 277 aa4.87□□□□□ -1.63
LINC01961-201ENST00000449954 SRSF9Q13242 221 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC01961-201ENST00000449954 TMEM182Q6ZP80 229 aaPredicted RBP4.87□□□□□ -1.63
LINC01961-201ENST00000449954 NIT1Q86X76 327 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms