RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 FANCD2OSQ96PS1 177 aa7.62□□□□□ -1.19
CCDC171-203ENST00000449575 K7EN84 100 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 BMPR1BO00238 502 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 TRGV3P03979 118 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 ELANEP08246 267 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 OPRK1P41145 380 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 PRCDQ00LT1 54 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 SLC25A34Q6PIV7 304 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 C8orf86Q6ZUL3 223 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 GTF2H5Q6ZYL4 71 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 ZNF257Q9Y2Q1 563 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 ARL2-SNX15V9GYD0 113 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 OR2T8A6NH00 312 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 M0R2Z0 102 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 OR7C2O60412 319 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 OR2J3O76001 311 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 ARL14EPLP0DKL9 152 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 SCGB1A1P11684 91 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 NPY1RP25929 384 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 Q56UQ5 140 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 FAM19A2Q8N3H0 131 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 ZNF491Q8N8L2 437 aa7.61□□□□□ -1.19
CCDC171-203ENST00000449575 ZNF331Q9NQX6 463 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-203ENST00000449575 NPIPB5A8MRT5 1133 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 NUDT3O95989 172 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 KLHL30-AS1Q8NEE0 82 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 TSSC4Q9Y5U2 329 aaPredicted RBP7.6□□□□□ -1.19
CCDC171-203ENST00000449575 MGAM2Q2M2H8 2515 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 IGHV3-21A0A0B4J1V1 117 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 G3V4G9 280 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 IGHV3-23P01764 117 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 GNG4P50150 75 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 PSG9Q00887 426 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 KLF5Q13887 457 aaPredicted RBP7.6□□□□□ -1.19
CCDC171-203ENST00000449575 KIAA1644Q3SXP7 199 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 PDLIM3Q53GG5 364 aaPredicted RBP7.6□□□□□ -1.19
CCDC171-203ENST00000449575 LCN12Q6JVE5 192 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 MRPL54Q6P161 138 aaKnown RBP7.6□□□□□ -1.19
CCDC171-203ENST00000449575 C18orf32Q8TCD1 76 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 TMEM70Q9BUB7 260 aa7.6□□□□□ -1.19
CCDC171-203ENST00000449575 GAGE10A6NGK3 116 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 ISLRO14498 428 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 TRBV12-3P01733 135 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 IGHV3-48P01763 117 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 IGLC1P0CG04 106 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 TIGITQ495A1 244 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 CACNG8Q8WXS5 425 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 PLEKHA3Q9HB20 300 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 NBEAL1Q6ZS30 2694 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 IGLV11-55A0A075B6I3 123 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 IZUMO1RA6ND01 250 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 DEFA4P12838 97 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 GCHFRP30047 84 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 HIST1H1AQ02539 215 aaPredicted RBP7.59□□□□□ -1.19
CCDC171-203ENST00000449575 NDUFA11Q86Y39 141 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 FER1L6-AS1Q8NA97 138 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 PMCHL2Q9BQD1 86 aa7.59□□□□□ -1.19
CCDC171-203ENST00000449575 SMIM27A0A1W2PRY6 76 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 HELTA6NFD8 242 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 CRYBB3P26998 211 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 UBE2E2Q96LR5 201 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 AP1S3Q96PC3 154 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 TMEM191AQ9H0A3 160 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 F11RQ9Y624 299 aaKnown RBP7.58□□□□□ -1.2
CCDC171-203ENST00000449575 MUC21A0A0G2JKD1 596 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 MUC21A0A140T8X8 626 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 OR4C46A6NHA9 309 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 C2orf70A6NJV1 201 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 CRXO43186 299 aaPredicted RBP7.58□□□□□ -1.2
CCDC171-203ENST00000449575 FRMD6-AS1P0C7T7 363 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 SEC11AP67812 179 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 MLANAQ16655 118 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 C15orf32Q32M92 178 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 MUC21Q5SSG8 566 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 EBLN2Q6P2I7 272 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 OR52E5Q8NH55 327 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 RAX2Q96IS3 184 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 MS4A6AQ9H2W1 248 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 YTHDF2Q9Y5A9 579 aaKnown RBP7.58□□□□□ -1.2
CCDC171-203ENST00000449575 NOTCH1P46531 2555 aa7.58□□□□□ -1.2
CCDC171-203ENST00000449575 RNASE2P10153 161 aaKnown RBP7.57□□□□□ -1.2
CCDC171-203ENST00000449575 SAMD13Q5VXD3 122 aa7.57□□□□□ -1.2
CCDC171-203ENST00000449575 SRSF8Q9BRL6 282 aaKnown RBP7.57□□□□□ -1.2
CCDC171-203ENST00000449575 H3BUA1 57 aa7.57□□□□□ -1.2
CCDC171-203ENST00000449575 SPINK4O60575 86 aa7.57□□□□□ -1.2
CCDC171-203ENST00000449575 SMIM17P0DL12 118 aa7.57□□□□□ -1.2
CCDC171-203ENST00000449575 CENPWQ5EE01 88 aa7.57□□□□□ -1.2
CCDC171-203ENST00000449575 GCSAMLQ5JQS6 135 aa7.57□□□□□ -1.2
CCDC171-203ENST00000449575 CCDC140Q96MF4 163 aa7.57□□□□□ -1.2
CCDC171-203ENST00000449575 HEYLQ9NQ87 328 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-203ENST00000449575 IGHV4OR15-8A0A075B7B6 117 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 A0A087WW49 117 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 LOC102724200A0A096LPH7 203 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-203ENST00000449575 BRI3O95415 125 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 ERHP84090 104 aaKnown RBP7.56□□□□□ -1.2
CCDC171-203ENST00000449575 PSG3Q16557 428 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 ERASQ7Z444 233 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 OR11H1Q8NG94 326 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 C4orf3Q8WVX3 66 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 DPF1Q92782 380 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms