RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ZNF726P1Q15940 193 aa10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 RRN3P1Q2M238 152 aa10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 LGALSLQ3ZCW2 172 aaPredicted RBP10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 EIF5AL1Q6IS14 154 aaKnown RBP10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 C9orf47Q6ZRZ4 202 aa10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 TMEM256Q8N2U0 113 aa10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 STOML3Q8TAV4 291 aa10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 C11orf45Q8TAV5 145 aa10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 AGPAT4-IT1Q9H0P7 198 aa10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 RPH3ALQ9UNE2 315 aa10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 TMEM189A5PLL7 270 aa10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 RBAKDNA6NC62 111 aa10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 MAP1LC3B2A6NCE7 125 aa10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 CXorf65A6NEN9 183 aa10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 DIRC3C9JPN6 131 aa10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 SLC25A5P05141 298 aaKnown RBP10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 RBMY1A1P0DJD3 496 aaKnown RBP10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 RBMY1CP0DJD4 496 aa10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 RBMY1FQ15415 496 aaKnown RBP10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 SSX7Q7RTT5 188 aa10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 LINC01587Q99440 93 aa10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 VGLL1Q99990 258 aa10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 C20orf144Q9BQM9 153 aa10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 MAP1LC3BQ9GZQ8 125 aa10.13□□□□□ -0.79
GTF3C3-206ENST00000448539 EMP1P54849 157 aa10.12□□□□□ -0.79
GTF3C3-206ENST00000448539 FGF8P55075 233 aaPredicted RBP10.12□□□□□ -0.79
GTF3C3-206ENST00000448539 PMS2P11Q13670 270 aa10.12□□□□□ -0.79
GTF3C3-206ENST00000448539 CASC10Q5T4H9 136 aa10.12□□□□□ -0.79
GTF3C3-206ENST00000448539 DPPA3Q6W0C5 159 aa10.12□□□□□ -0.79
GTF3C3-206ENST00000448539 ARL6IP6Q8N6S5 226 aa10.12□□□□□ -0.79
GTF3C3-206ENST00000448539 FAM213BQ8TBF2 198 aa10.12□□□□□ -0.79
GTF3C3-206ENST00000448539 SUN5Q8TC36 379 aa10.12□□□□□ -0.79
GTF3C3-206ENST00000448539 TMED6Q8WW62 240 aa10.12□□□□□ -0.79
GTF3C3-206ENST00000448539 ZNF492Q9P255 531 aa10.12□□□□□ -0.79
GTF3C3-206ENST00000448539 LOC102723971A0A1B0GUV8 181 aa10.11□□□□□ -0.79
GTF3C3-206ENST00000448539 K7EQM0 130 aa10.11□□□□□ -0.79
GTF3C3-206ENST00000448539 ZNF138P52744 262 aa10.11□□□□□ -0.79
GTF3C3-206ENST00000448539 CD300CQ08708 224 aa10.11□□□□□ -0.79
GTF3C3-206ENST00000448539 GOLT1AQ6ZVE7 132 aa10.11□□□□□ -0.79
GTF3C3-206ENST00000448539 SLC51BQ86UW2 128 aa10.11□□□□□ -0.79
GTF3C3-206ENST00000448539 NIPSNAP3BQ9BS92 247 aa10.11□□□□□ -0.79
GTF3C3-206ENST00000448539 DYNC2H1Q8NCM8 4307 aaKnown RBP10.11□□□□□ -0.79
GTF3C3-206ENST00000448539 TRAV12-3A0A0B4J271 114 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 SERTM2A0A1B0GWG4 89 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 A0A1W2PRE2 83 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 C7orf71A4D174 169 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 ZNF705GA8MUZ8 300 aaPredicted RBP10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 H7BYZ3 331 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 GPX1P07203 203 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 HTN1P15515 57 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 FHITP49789 147 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 TAS2R60P59551 318 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 NANOS2P60321 138 aaKnown RBP10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 UBE2G2P60604 165 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 SUMO1P63165 101 aaKnown RBP10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 GFI1BQ5VTD9 330 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 C5orf17Q8NAS9 161 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 SFT2D1Q8WV19 159 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 TMPRSS5Q9H3S3 457 aa10.1□□□□□ -0.79
GTF3C3-206ENST00000448539 TRBV7-9A0A0J9YWB2 115 aa10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 TEX48A0A1B0GUV7 120 aa10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 NMBP08949 121 aa10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 CRISP2P16562 243 aa10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 RNASE4P34096 147 aaKnown RBP10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 RAB5CP51148 216 aa10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 GNG5P63218 68 aa10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 KIR3DS1Q14943 382 aa10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 CCDC28AQ8IWP9 274 aa10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 C9orf62Q8N4C0 152 aa10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 Q8TAT8 98 aa10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 FAM19A4Q96LR4 140 aa10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 NKX6-2Q9C056 277 aaPredicted RBP10.09□□□□□ -0.79
GTF3C3-206ENST00000448539 SACSQ9NZJ4 4579 aa10.08□□□□□ -0.8
GTF3C3-206ENST00000448539 NUPR2A6NF83 97 aa10.08□□□□□ -0.8
GTF3C3-206ENST00000448539 KLLNB2CW77 178 aa10.08□□□□□ -0.8
GTF3C3-206ENST00000448539 GGTLC3B5MD39 225 aa10.08□□□□□ -0.8
GTF3C3-206ENST00000448539 IFNA7P01567 189 aa10.08□□□□□ -0.8
GTF3C3-206ENST00000448539 H2AFB1P0C5Y9 115 aa10.08□□□□□ -0.8
GTF3C3-206ENST00000448539 SPART-AS1P0CW21 52 aa10.08□□□□□ -0.8
GTF3C3-206ENST00000448539 PLA2G2EQ9NZK7 142 aa10.08□□□□□ -0.8
GTF3C3-206ENST00000448539 EPDR1Q9UM22 224 aa10.08□□□□□ -0.8
GTF3C3-206ENST00000448539 LENEPQ9Y5L5 61 aa10.08□□□□□ -0.8
GTF3C3-206ENST00000448539 RYR2Q92736 4967 aa10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 A0A1B0GV50 99 aa10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 TCRAP04437 139 aa10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 BTN1A1Q13410 526 aa10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 ZFAND2AQ8N6M9 145 aa10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 PHLDA1Q8WV24 401 aaPredicted RBP10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 MBD3L1Q8WWY6 194 aa10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 C16orf74Q96GX8 76 aa10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 PYGO2Q9BRQ0 406 aa10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 NDFIP1Q9BT67 221 aa10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 KLK5Q9Y337 293 aaPredicted RBP10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 YTHDF2Q9Y5A9 579 aaKnown RBP10.07□□□□□ -0.8
GTF3C3-206ENST00000448539 CSMD3Q7Z407 3707 aa10.06□□□□□ -0.8
GTF3C3-206ENST00000448539 STARD9Q9P2P6 4700 aa10.06□□□□□ -0.8
GTF3C3-206ENST00000448539 FAM74A7A6NL05 159 aa10.06□□□□□ -0.8
GTF3C3-206ENST00000448539 TEX46H3BTG2 121 aa10.06□□□□□ -0.8
GTF3C3-206ENST00000448539 PRM2P04554 102 aa10.06□□□□□ -0.8
GTF3C3-206ENST00000448539 FAM222AQ5U5X8 452 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms