RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ENSAO43768 121 aaKnown RBP7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 SCGB1D4Q6XE38 83 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 Q6ZT83 130 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 HIF1ANQ9NWT6 349 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 TRAV8-2A0A0B4J237 113 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 K7EM74 188 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 TM4SF5O14894 197 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 LHBP01229 141 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 IFITM1P13164 125 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 RPL27AP46776 148 aaKnown RBP7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 TMEM30BQ3MIR4 351 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 TCL1BO95988 128 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 IGLV2-23P01705 113 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 TMEM78Q5T7P6 136 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 ORM1P02763 201 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 LGALS1P09382 135 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 SCGB1C2P0DMR2 95 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 UBE2D3P61077 147 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 UBE2D2P62837 147 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 AJUBAQ96IF1 538 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 PROCRQ9UNN8 238 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 RAXQ9Y2V3 346 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 TRGV5A0A0B4J1U4 118 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 BRI3O95415 125 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 TMEM190Q8WZ59 177 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 GAFA1Q96PS6 74 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 SHANK2-AS3Q9BTD1 123 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 TNFRSF18Q9Y5U5 241 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 TRAV4A0A0B4J268 109 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 EFNA4P52798 201 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 LAGE3Q14657 143 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 C1orf122Q6ZSJ8 110 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 LINC00574Q9H8X3 128 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 SPRR3Q9UBC9 169 aa7.37□□□□□ -1.23
SYNPO2-204ENST00000448416 F8VRH5 84 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 H7C1H1 209 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 IGLC6P0CF74 106 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 UBE2D1P51668 147 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 MSMPQ1L6U9 139 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 PPP1R27Q86WC6 154 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 RNF7Q9UBF6 113 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 IGKV2-40A0A087WW87 121 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 IGHV3-72A0A0B4J1Y9 119 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 ZNF815PA8K554 130 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 IGKV2D-40P01614 121 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 CCL3L1P16619 93 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 OR11H6Q8NGC7 330 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 MED13Q9UHV7 2174 aa7.36□□□□□ -1.23
SYNPO2-204ENST00000448416 IGHV1-18A0A0C4DH31 117 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 SCGB2A1O75556 95 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 C6orf15Q6UXA7 325 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 PRR25Q96S07 402 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 CEP290O15078 2479 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 ZGRF1Q86YA3 2104 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 H3BRN7 92 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 ASIPP42127 132 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 FAM159AQ6UWV7 190 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 DTX2Q86UW9 622 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 VKORC1Q9BQB6 163 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 ZNF80P51504 273 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 SBSPONQ8IVN8 264 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 Q8TAT8 98 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 IGLV2-18A0A075B6J9 118 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 CRLF1O75462 422 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 CEACAM4O75871 244 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 PVRIGQ6DKI7 326 aa7.35□□□□□ -1.23
SYNPO2-204ENST00000448416 IGKV1-17P01599 117 aa7.34□□□□□ -1.23
SYNPO2-204ENST00000448416 PRADC1Q9BSG0 188 aa7.34□□□□□ -1.23
SYNPO2-204ENST00000448416 CENPVL3A0A0U1RRI6 287 aa7.34□□□□□ -1.23
SYNPO2-204ENST00000448416 KLK15Q9H2R5 256 aa7.34□□□□□ -1.23
SYNPO2-204ENST00000448416 PRRC2CQ9Y520 2896 aaKnown RBP7.34□□□□□ -1.23
SYNPO2-204ENST00000448416 NTN3O00634 580 aaPredicted RBP7.34□□□□□ -1.23
SYNPO2-204ENST00000448416 SLC25A20O43772 301 aa7.34□□□□□ -1.23
SYNPO2-204ENST00000448416 IGFBP4P22692 258 aa7.34□□□□□ -1.23
SYNPO2-204ENST00000448416 NDUFA11Q86Y39 141 aa7.34□□□□□ -1.23
SYNPO2-204ENST00000448416 ONECUT1Q9UBC0 465 aa7.34□□□□□ -1.23
SYNPO2-204ENST00000448416 RAI1Q7Z5J4 1906 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-204ENST00000448416 FCN3O75636 299 aa7.33□□□□□ -1.24
SYNPO2-204ENST00000448416 MRGPRG-AS1Q2M3A8 158 aa7.33□□□□□ -1.24
SYNPO2-204ENST00000448416 PLEKHB2Q96CS7 222 aa7.33□□□□□ -1.24
SYNPO2-204ENST00000448416 C9JAW5 83 aa7.33□□□□□ -1.24
SYNPO2-204ENST00000448416 MEIG1Q5JSS6 88 aa7.33□□□□□ -1.24
SYNPO2-204ENST00000448416 RNF125Q96EQ8 232 aa7.33□□□□□ -1.24
SYNPO2-204ENST00000448416 CTSZQ9UBR2 303 aa7.33□□□□□ -1.24
SYNPO2-204ENST00000448416 IGLV1-44P01699 117 aa7.33□□□□□ -1.24
SYNPO2-204ENST00000448416 CD7P09564 240 aa7.33□□□□□ -1.24
SYNPO2-204ENST00000448416 TRAV12-1A0A0B4J245 112 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 SLC25A16P16260 332 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 YAE1D1Q9NRH1 226 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 SPANXA1Q9NS26 97 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 TNFAIP6P98066 277 aaPredicted RBP7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 C1orf210Q8IVY1 113 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 ZNF491Q8N8L2 437 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 SCGB3A1Q96QR1 104 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 CNFNQ9BYD5 112 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 SPRY4Q9C004 299 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 MRPS12O15235 138 aaKnown RBP7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 CFIP05156 583 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 CD40P25942 277 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 CNTFRP26992 372 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms