RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 COX7B2Q8TF08 81 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 PLXNA1Q9UIW2 1896 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 TRBV19A0A075B6N1 114 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 TIRAPP58753 221 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 HGFACQ04756 655 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 SIGLEC12Q96PQ1 595 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 C1QTNF5Q9BXJ0 243 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 IGKV3D-7A0A0C4DH55 119 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 FBLIM1Q8WUP2 373 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 C20orf78Q9BR46 151 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 REPIN1Q9BWE0 567 aaKnown RBP7.29□□□□□ -1.24
NIPBL-202ENST00000448238 TRBV5-3A0A0A0MS03 114 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 ZNF492Q9P255 531 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 LYZL4Q96KX0 146 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 USP54Q70EL1 1684 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 LTAP01374 205 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 DYNAPQ8N1N2 210 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 WFDC12Q8WWY7 111 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 ALS2Q96Q42 1657 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 RNASE6Q93091 150 aaKnown RBP7.28□□□□□ -1.24
NIPBL-202ENST00000448238 KNDC1Q76NI1 1749 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 CRYBG1Q9Y4K1 1723 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 NPSP0C0P6 89 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 FXYD7P58549 80 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 QSER1Q2KHR3 1735 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 UPK3BQ9BT76 320 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 IGHV2-26A0A0B4J1V2 119 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 FOXI2Q6ZQN5 318 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 CECR9P0C854 216 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 ZCCHC24Q8N2G6 241 aaKnown RBP7.28□□□□□ -1.24
NIPBL-202ENST00000448238 FGFBP3Q8TAT2 258 aa7.28□□□□□ -1.24
NIPBL-202ENST00000448238 ABCA3Q99758 1704 aa7.27□□□□□ -1.24
NIPBL-202ENST00000448238 IGKV1-5P01602 117 aa7.27□□□□□ -1.24
NIPBL-202ENST00000448238 C11orf44Q8N8P7 122 aa7.27□□□□□ -1.24
NIPBL-202ENST00000448238 Q6ZWC4 215 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 PYGO2Q9BRQ0 406 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 MSRB2Q9Y3D2 182 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 PKD1L3Q7Z443 1732 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 CR1LQ2VPA4 569 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 RFLNBQ8N5W9 214 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 KLF2Q9Y5W3 355 aaPredicted RBP7.27□□□□□ -1.25
NIPBL-202ENST00000448238 DDX60LQ5H9U9 1706 aaKnown RBP7.27□□□□□ -1.25
NIPBL-202ENST00000448238 ZNF462Q96JM2 2506 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 IGHV2OR16-5A0A0B4J2B6 119 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 STPG1Q5TH74 334 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 ATP5EP2Q5VTU8 51 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 POLR3KQ9Y2Y1 108 aaPredicted RBP7.27□□□□□ -1.25
NIPBL-202ENST00000448238 CAMTA1Q9Y6Y1 1673 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 SMKR1H3BMG3 65 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 RPL18AQ02543 176 aaKnown RBP7.27□□□□□ -1.25
NIPBL-202ENST00000448238 C5orf64Q2M2E5 130 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 TEX36Q5VZQ5 186 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 FAM216BQ8N7L0 139 aa7.27□□□□□ -1.25
NIPBL-202ENST00000448238 MCRIP2Q9BUT9 160 aaKnown RBP7.27□□□□□ -1.25
NIPBL-202ENST00000448238 LINC00643Q86TS7 51 aa7.26□□□□□ -1.25
NIPBL-202ENST00000448238 RGPD3A6NKT7 1758 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-202ENST00000448238 TRBV10-2A0A0K0K1G8 114 aa7.26□□□□□ -1.25
NIPBL-202ENST00000448238 G3V4G9 280 aa7.26□□□□□ -1.25
NIPBL-202ENST00000448238 IGKV2D-24A0A075B6R9 120 aa7.26□□□□□ -1.25
NIPBL-202ENST00000448238 BPY2O14599 106 aa7.26□□□□□ -1.25
NIPBL-202ENST00000448238 STRCP1A6NGW2 1772 aa7.26□□□□□ -1.25
NIPBL-202ENST00000448238 C18orf32Q8TCD1 76 aa7.26□□□□□ -1.25
NIPBL-202ENST00000448238 KDM3BQ7LBC6 1761 aa7.26□□□□□ -1.25
NIPBL-202ENST00000448238 H3BT86 120 aa7.26□□□□□ -1.25
NIPBL-202ENST00000448238 NRTNQ99748 197 aa7.26□□□□□ -1.25
NIPBL-202ENST00000448238 ZNF501Q96CX3 271 aaPredicted RBP7.25□□□□□ -1.25
NIPBL-202ENST00000448238 CRYGSP22914 178 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 FAM110AQ9BQ89 295 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 ICOSQ9Y6W8 199 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 ACACBO00763 2458 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 WNK3Q9BYP7 1800 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 TAF1LQ8IZX4 1826 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 Q8TAT8 98 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 LINC01560Q8TB33 94 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 SP7Q8TDD2 431 aaPredicted RBP7.25□□□□□ -1.25
NIPBL-202ENST00000448238 MRPL35Q9NZE8 188 aaKnown RBP7.25□□□□□ -1.25
NIPBL-202ENST00000448238 UBR3Q6ZT12 1888 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 TCF20Q9UGU0 1960 aaKnown RBP7.25□□□□□ -1.25
NIPBL-202ENST00000448238 ZNRF2Q8NHG8 242 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 RHPN1-AS1Q9BWJ2 59 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 CYTL1Q9NRR1 136 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 PRR4Q16378 134 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 SEM1Q6ZVN7 128 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 SND1-IT1Q9HBX3 110 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 NRAPQ86VF7 1730 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 PIN1P1O15428 100 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 ATP6V0E2Q8NHE4 81 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 AMELYQ99218 206 aa7.25□□□□□ -1.25
NIPBL-202ENST00000448238 MYO9AB2RTY4 2548 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 ITGB4P16144 1822 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 NDUFA4O00483 81 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 IGKV1D-16P01601 117 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 Q86TA4 180 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 ELANEP08246 267 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 Q9H8V8 135 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 SIGLEC9Q9Y336 463 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 TMEM131Q92545 1883 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 PRR30Q53SZ7 412 aaPredicted RBP7.24□□□□□ -1.25
NIPBL-202ENST00000448238 C20orf204Q6ZNR8 217 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 B4DSR2 109 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms