RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 RAB5CP51148 216 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 TMEM78Q5T7P6 136 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 SSX7Q7RTT5 188 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 SLC7A5P1Q8MH63 180 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 FAM213BQ8TBF2 198 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 SUN5Q8TC36 379 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 IGF2BP2-AS1Q96M15 143 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 TMEM208Q9BTX3 173 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 RBAKDNA6NC62 111 aa9.52□□□□□ -0.89
ERGIC3-209ENST00000447986 ZNF705EA8MWA4 302 aaPredicted RBP9.52□□□□□ -0.89
ERGIC3-209ENST00000447986 M0R2Z0 102 aa9.52□□□□□ -0.89
ERGIC3-209ENST00000447986 MIFP14174 115 aa9.52□□□□□ -0.89
ERGIC3-209ENST00000447986 LEPP41159 167 aa9.52□□□□□ -0.89
ERGIC3-209ENST00000447986 ODF3Q96PU9 254 aa9.52□□□□□ -0.89
ERGIC3-209ENST00000447986 EDA2RQ9HAV5 297 aa9.52□□□□□ -0.89
ERGIC3-209ENST00000447986 AGRNO00468 2067 aa9.52□□□□□ -0.89
ERGIC3-209ENST00000447986 IGHV3OR16-12A0A075B7B8 117 aa9.51□□□□□ -0.89
ERGIC3-209ENST00000447986 SLC25A5P05141 298 aaKnown RBP9.51□□□□□ -0.89
ERGIC3-209ENST00000447986 FGF8P55075 233 aaPredicted RBP9.51□□□□□ -0.89
ERGIC3-209ENST00000447986 C9orf47Q6ZRZ4 202 aa9.51□□□□□ -0.89
ERGIC3-209ENST00000447986 SFT2D1Q8WV19 159 aa9.51□□□□□ -0.89
ERGIC3-209ENST00000447986 NKX6-2Q9C056 277 aaPredicted RBP9.51□□□□□ -0.89
ERGIC3-209ENST00000447986 IGKV2-40A0A087WW87 121 aaPredicted RBP9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 A0A0J9YWU9 116 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 SERTM2A0A1B0GWG4 89 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 A0A1W2PRE2 83 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 DIRC3C9JPN6 131 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 TEX46H3BTG2 121 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 K7EQM0 130 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 IGKV2D-40P01614 121 aaPredicted RBP9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 H2AFB1P0C5Y9 115 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 FHITP49789 147 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 ZNF705AQ6ZN79 300 aaPredicted RBP9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 C5orf17Q8NAS9 161 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 IL17DQ8TAD2 202 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 RPH3ALQ9UNE2 315 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 TGP01266 2768 aa9.5□□□□□ -0.89
ERGIC3-209ENST00000447986 TRAV12-2A0A075B6T6 113 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 LOC105371267A0A1B0GV96 52 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 CT45A10P0DMU9 189 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 ERCC8Q13216 396 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 TMEM256Q8N2U0 113 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 MBD3L1Q8WWY6 194 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 NEU1Q99519 415 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 C20orf144Q9BQM9 153 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 AGPAT4-IT1Q9H0P7 198 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 C11orf68Q9H3H3 251 aaKnown RBP9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 CRXO43186 299 aaPredicted RBP9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 HBE1P02100 147 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 ZNF138P52744 262 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 TMPRSS5Q9H3S3 457 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 X6R8D5 127 aa9.49□□□□□ -0.89
ERGIC3-209ENST00000447986 TRBV7-9A0A0J9YWB2 115 aa9.48□□□□□ -0.89
ERGIC3-209ENST00000447986 NMBP08949 121 aa9.48□□□□□ -0.89
ERGIC3-209ENST00000447986 SULT1A2P50226 295 aa9.48□□□□□ -0.89
ERGIC3-209ENST00000447986 PPT1P50897 306 aa9.48□□□□□ -0.89
ERGIC3-209ENST00000447986 NKX2-5P52952 324 aaPredicted RBP9.48□□□□□ -0.89
ERGIC3-209ENST00000447986 UBE2G2P60604 165 aa9.48□□□□□ -0.89
ERGIC3-209ENST00000447986 GOLT1AQ6ZVE7 132 aa9.48□□□□□ -0.89
ERGIC3-209ENST00000447986 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
ERGIC3-209ENST00000447986 Q8NAQ8 132 aa9.48□□□□□ -0.89
ERGIC3-209ENST00000447986 VGLL1Q99990 258 aa9.48□□□□□ -0.89
ERGIC3-209ENST00000447986 ZNF492Q9P255 531 aa9.48□□□□□ -0.89
ERGIC3-209ENST00000447986 IGHV4-28A0A0C4DH34 117 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 TMEM189A5PLL7 270 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 J3KRW8 73 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 IFNA7P01567 189 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 GPX1P07203 203 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 RRN3P1Q2M238 152 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 MUC7Q8TAX7 377 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 LINC01587Q99440 93 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 NIPSNAP3BQ9BS92 247 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 LENEPQ9Y5L5 61 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 ARL2-SNX15V9GYD0 113 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 COL7A1Q02388 2944 aa9.47□□□□□ -0.89
ERGIC3-209ENST00000447986 GGTLC3B5MD39 225 aa9.46□□□□□ -0.89
ERGIC3-209ENST00000447986 H7BYZ3 331 aa9.46□□□□□ -0.89
ERGIC3-209ENST00000447986 TCRAP04437 139 aa9.46□□□□□ -0.89
ERGIC3-209ENST00000447986 CRISP2P16562 243 aa9.46□□□□□ -0.89
ERGIC3-209ENST00000447986 GNG5P63218 68 aa9.46□□□□□ -0.89
ERGIC3-209ENST00000447986 CTAG1AP78358 180 aa9.46□□□□□ -0.89
ERGIC3-209ENST00000447986 GFI1BQ5VTD9 330 aa9.46□□□□□ -0.89
ERGIC3-209ENST00000447986 FAM19A4Q96LR4 140 aa9.46□□□□□ -0.89
ERGIC3-209ENST00000447986 EPDR1Q9UM22 224 aa9.46□□□□□ -0.89
ERGIC3-209ENST00000447986 A0A1B0GV50 99 aa9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 FBLL1A6NHQ2 334 aaKnown RBP9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 FAM74A7A6NL05 159 aa9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 F6UZH7 168 aa9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 DEFB4AO15263 64 aa9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 TAS2R60P59551 318 aa9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 IFITM2Q01629 132 aa9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 CST9LP1Q5W188 147 aa9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 CYB561D1Q8N8Q1 229 aa9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 TCEAL7Q9BRU2 100 aa9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 ATG101Q9BSB4 218 aa9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 NDFIP1Q9BT67 221 aa9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 YTHDF2Q9Y5A9 579 aaKnown RBP9.45□□□□□ -0.9
ERGIC3-209ENST00000447986 DNAH9Q9NYC9 4486 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms