RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TTC32Q5I0X7 151 aa15.13■□□□□ 0.01
HMGA1-205ENST00000447654 FAM169BQ8N8A8 192 aa15.13■□□□□ 0.01
HMGA1-205ENST00000447654 MAPKAPK5-AS1Q8N8E1 139 aa15.13■□□□□ 0.01
HMGA1-205ENST00000447654 FLYWCH2Q96CP2 140 aaKnown RBP15.13■□□□□ 0.01
HMGA1-205ENST00000447654 MYMXA0A1B0GTQ4 84 aa15.12■□□□□ 0.01
HMGA1-205ENST00000447654 FCN3O75636 299 aa15.12■□□□□ 0.01
HMGA1-205ENST00000447654 CECR9P0C854 216 aa15.12■□□□□ 0.01
HMGA1-205ENST00000447654 ORM2P19652 201 aa15.12■□□□□ 0.01
HMGA1-205ENST00000447654 GOLT1AQ6ZVE7 132 aa15.12■□□□□ 0.01
HMGA1-205ENST00000447654 FBXL15Q9H469 300 aa15.12■□□□□ 0.01
HMGA1-205ENST00000447654 ZNF71Q9NQZ8 489 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-205ENST00000447654 LEPP41159 167 aa15.12■□□□□ 0.01
HMGA1-205ENST00000447654 MZT1Q08AG7 82 aa15.12■□□□□ 0.01
HMGA1-205ENST00000447654 DIAPH2-AS1Q14236 149 aa15.12■□□□□ 0.01
HMGA1-205ENST00000447654 TMEM126AQ9H061 195 aa15.12■□□□□ 0.01
HMGA1-205ENST00000447654 ICE1Q9Y2F5 2266 aa15.12■□□□□ 0.01
HMGA1-205ENST00000447654 RELNP78509 3460 aa15.11■□□□□ 0.01
HMGA1-205ENST00000447654 TRAV8-1A0A0A6YYK1 113 aa15.11■□□□□ 0.01
HMGA1-205ENST00000447654 SNCGO76070 127 aa15.11■□□□□ 0.01
HMGA1-205ENST00000447654 SAA1P0DJI8 122 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-205ENST00000447654 PLNP26678 52 aa15.11■□□□□ 0.01
HMGA1-205ENST00000447654 FXYD7P58549 80 aa15.11■□□□□ 0.01
HMGA1-205ENST00000447654 FOXC2Q99958 501 aa15.11■□□□□ 0.01
HMGA1-205ENST00000447654 LYZL1Q6UWQ5 148 aa15.11■□□□□ 0.01
HMGA1-205ENST00000447654 CCDC179H3BU77 68 aa15.1■□□□□ 0.01
HMGA1-205ENST00000447654 PSMB2P49721 201 aa15.1■□□□□ 0.01
HMGA1-205ENST00000447654 LYPD1Q8N2G4 141 aa15.1■□□□□ 0.01
HMGA1-205ENST00000447654 K7EMI3 77 aa15.09■□□□□ 0.01
HMGA1-205ENST00000447654 MSMPQ1L6U9 139 aa15.09■□□□□ 0.01
HMGA1-205ENST00000447654 IGHV1-18A0A0C4DH31 117 aa15.09■□□□□ 0.01
HMGA1-205ENST00000447654 UBE2D1P51668 147 aa15.09■□□□□ 0.01
HMGA1-205ENST00000447654 FAM215AQ9Y5M1 114 aa15.09■□□□□ 0.01
HMGA1-205ENST00000447654 TMEM213A2RRL7 107 aa15.08■□□□□ 0.01
HMGA1-205ENST00000447654 IGFL3Q6UXB1 125 aa15.08■□□□□ 0.01
HMGA1-205ENST00000447654 PLCE1Q9P212 2302 aa15.08■□□□□ 0
HMGA1-205ENST00000447654 IGLV1-44P01699 117 aa15.08■□□□□ 0
HMGA1-205ENST00000447654 C17orf58Q2M2W7 97 aa15.08■□□□□ 0
HMGA1-205ENST00000447654 PVRIGQ6DKI7 326 aa15.08■□□□□ 0
HMGA1-205ENST00000447654 C1orf162Q8NEQ5 155 aaPredicted RBP15.08■□□□□ 0
HMGA1-205ENST00000447654 TPPP3Q9BW30 176 aa15.08■□□□□ 0
HMGA1-205ENST00000447654 CRIP1P50238 77 aa15.07■□□□□ 0
HMGA1-205ENST00000447654 WFDC3Q8IUB2 231 aa15.07■□□□□ 0
HMGA1-205ENST00000447654 TMEM160Q9NX00 188 aa15.07■□□□□ 0
HMGA1-205ENST00000447654 AGRNO00468 2067 aa15.07■□□□□ 0
HMGA1-205ENST00000447654 TRAV40A0A0B4J280 105 aa15.07■□□□□ 0
HMGA1-205ENST00000447654 MBD3L4A6NDZ8 208 aaPredicted RBP15.07■□□□□ 0
HMGA1-205ENST00000447654 MBD3L3A6NE82 208 aaPredicted RBP15.07■□□□□ 0
HMGA1-205ENST00000447654 MBD3L5A6NJ08 208 aaPredicted RBP15.07■□□□□ 0
HMGA1-205ENST00000447654 TNFRSF1AP19438 455 aa15.07■□□□□ 0
HMGA1-205ENST00000447654 ZNF474Q6S9Z5 364 aaPredicted RBP15.07■□□□□ 0
HMGA1-205ENST00000447654 PPP1R27Q86WC6 154 aa15.07■□□□□ 0
HMGA1-205ENST00000447654 MBD3L2Q8NHZ7 208 aaPredicted RBP15.07■□□□□ 0
HMGA1-205ENST00000447654 RAB1BQ9H0U4 201 aa15.07■□□□□ 0
HMGA1-205ENST00000447654 PROCRQ9UNN8 238 aa15.07■□□□□ 0
HMGA1-205ENST00000447654 IGKV1D-17A0A075B6S4 117 aa15.06■□□□□ 0
HMGA1-205ENST00000447654 IGHV3-13P01766 116 aa15.06■□□□□ 0
HMGA1-205ENST00000447654 IGKV1-16P04430 117 aa15.06■□□□□ 0
HMGA1-205ENST00000447654 COX8CQ7Z4L0 72 aa15.06■□□□□ 0
HMGA1-205ENST00000447654 TMEM167AQ8TBQ9 72 aa15.06■□□□□ 0
HMGA1-205ENST00000447654 SPXQ9BT56 116 aa15.06■□□□□ 0
HMGA1-205ENST00000447654 HIGD1AQ9Y241 93 aa15.06■□□□□ 0
HMGA1-205ENST00000447654 SPTBN4Q9H254 2564 aa15.06■□□□□ 0
HMGA1-205ENST00000447654 PCNX1Q96RV3 2341 aa15.06■□□□□ 0
HMGA1-205ENST00000447654 AJUBAQ96IF1 538 aa15.05■□□□□ 0
HMGA1-205ENST00000447654 VPREB3Q9UKI3 123 aa15.05■□□□□ 0
HMGA1-205ENST00000447654 ZZEF1O43149 2961 aa15.05■□□□□ -0
HMGA1-205ENST00000447654 SRRM5B3KS81 715 aa15.05■□□□□ -0
HMGA1-205ENST00000447654 WT1-ASQ06250 92 aa15.05■□□□□ -0
HMGA1-205ENST00000447654 OR11H6Q8NGC7 330 aa15.05■□□□□ -0
HMGA1-205ENST00000447654 OR4C13Q8NGP0 309 aa15.05■□□□□ -0
HMGA1-205ENST00000447654 PTH2Q96A98 100 aa15.05■□□□□ -0
HMGA1-205ENST00000447654 RASL11BQ9BPW5 248 aa15.05■□□□□ -0
HMGA1-205ENST00000447654 MRPL35Q9NZE8 188 aaKnown RBP15.05■□□□□ -0
HMGA1-205ENST00000447654 SLC25A15Q9Y619 301 aa15.05■□□□□ -0
HMGA1-205ENST00000447654 LINC01549A6NIU2 74 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 TIMM8AO60220 97 aaPredicted RBP15.04■□□□□ -0
HMGA1-205ENST00000447654 C22orf34Q6ZV56 151 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 Q8N8P6 123 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 OR10J6PQ8NGY7 276 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 MYOZ3Q8TDC0 251 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 LINC00574Q9H8X3 128 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 MRPL36Q9P0J6 103 aaKnown RBP15.04■□□□□ -0
HMGA1-205ENST00000447654 MDFICQ9P1T7 246 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 TRAV12-1A0A0B4J245 112 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 LOC107984156A0A0G2JMH3 177 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 SCGB1C2P0DMR2 95 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 SPRNQ5BIV9 151 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 ARL17AQ8IVW1 177 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 ANKRD29Q8N6D5 301 aa15.04■□□□□ -0
HMGA1-205ENST00000447654 TNCP24821 2201 aa15.03■□□□□ -0
HMGA1-205ENST00000447654 ROS1P08922 2347 aa15.03■□□□□ -0
HMGA1-205ENST00000447654 TLN1Q9Y490 2541 aaKnown RBP15.03■□□□□ -0
HMGA1-205ENST00000447654 SRSF2Q01130 221 aaKnown RBP15.02■□□□□ -0
HMGA1-205ENST00000447654 MRPL23Q16540 153 aaKnown RBP15.02■□□□□ -0
HMGA1-205ENST00000447654 LEAP2Q969E1 77 aa15.02■□□□□ -0
HMGA1-205ENST00000447654 ZGRF1Q86YA3 2104 aa15.02■□□□□ -0
HMGA1-205ENST00000447654 CACNA1AO00555 2505 aa15.02□□□□□ -0.01
HMGA1-205ENST00000447654 PRTN3P24158 256 aa15.02□□□□□ -0.01
HMGA1-205ENST00000447654 EXOC3-AS1Q8N2X6 119 aa15.02□□□□□ -0.01
HMGA1-205ENST00000447654 LINC01600Q96MT4 127 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms