RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ATP5LO75964 103 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 CISD3P0C7P0 127 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 EVI2AP22794 236 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGHV1-2P23083 117 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 MPV17P39210 176 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 MAGEA5P43359 124 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZNF816Q0VGE8 651 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 MRPL23Q16540 153 aaKnown RBP3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 KLF17Q5JT82 389 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 UTF1Q5T230 341 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 SPINK14Q6IE38 97 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 MOB3BQ86TA1 216 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 PDPNQ86YL7 162 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 CACNG8Q8WXS5 425 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 IFI27L1Q96BM0 104 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 NABP2Q9BQ15 211 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 RTL8AQ9BWD3 113 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 CHRNA10Q9GZZ6 450 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 TIMM8BQ9Y5J9 83 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 MPC1Q9Y5U8 109 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 F11RQ9Y624 299 aaKnown RBP3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 LINC00312Q9Y6C7 94 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 TANC2Q9HCD6 1990 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 SPAG17Q6Q759 2223 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1-6A0A0C4DH72 117 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 A0A1B0GUT8 65 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 IGLL5B9A064 214 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 IGLV2-8P01709 118 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 ATP5G1P05496 136 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 DEFA4P12838 97 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PLNP26678 52 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 SUB1P53999 127 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 FOXA3P55318 350 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 ATP5G2Q06055 141 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PLGLAQ15195 96 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 CFAP126Q5VTH2 177 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PVRIGQ6DKI7 326 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 Q6ZR54 194 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 RPS19BP1Q86WX3 136 aaKnown RBP3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 ORMDL3Q8N138 153 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 KIR3DL3Q8N743 410 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 GATD1Q8NB37 220 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 SLC37A2Q8TED4 501 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 BADQ92934 168 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 RPEQ96AT9 228 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PRELID3AQ96N28 172 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 HIST1H4GQ99525 98 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 CITED1Q99966 193 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 NAA38Q9BRA0 125 aaKnown RBP3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 OR2H1Q9GZK4 316 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 TP73-AS1Q9UF72 201 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PRNDQ9UKY0 176 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PTPRBP23467 1997 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRAV25A0A0B4J276 109 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 SNAI2O43623 268 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 DPM2O94777 84 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 MOSP00540 346 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 IGKCP01834 107 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 MT-ATP8P03928 68 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 IGF1P05019 195 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 SLC25A5P05141 298 aaKnown RBP3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 ZNF32P17041 273 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 FXYD2P54710 66 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 MIR17HGQ75NE6 70 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 PPP1R27Q86WC6 154 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 LRRC75A-AS1Q8N1F1 130 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 Q8N7P7 452 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 OR11H6Q8NGC7 330 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 MRAPQ8TCY5 172 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 DNAJC30Q96LL9 226 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 RASL11BQ9BPW5 248 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 PAXXQ9BUH6 204 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 TMEM133Q9H2Q1 129 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 FBXL15Q9H469 300 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 B4GALT7Q9UBV7 327 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 VPREB3Q9UKI3 123 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 TET1Q8NFU7 2136 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRBV25-1A0A075B6N4 114 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 A0A1B0GX51 115 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 K7ERJ3 54 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 EFNA2O43921 213 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 LTAP01374 205 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 SCGB1C2P0DMR2 95 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 RPL13AP40429 203 aaKnown RBP3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 WFDC2Q14508 124 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 TMEM78Q5T7P6 136 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 C10orf113Q5VZT2 155 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 SPATA31B1PQ5VZV4 182 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 MORN3Q6PF18 240 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 Q86TA4 180 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 LINC00612Q8N6U2 182 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 RNF138Q8WVD3 245 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 NRGNQ92686 78 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 TMEM101Q96IK0 257 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 PGLYRP4Q96LB8 373 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 ZNF488Q96MN9 340 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 C20orf78Q9BR46 151 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 NXT2Q9NPJ8 142 aaKnown RBP3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 PRO0461Q9UI25 63 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms