RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 ZNRF2Q8NHG8 242 aa14.48□□□□□ -0.09
SDC1-205ENST00000447124 PPP1R1CQ8WVI7 109 aa14.48□□□□□ -0.09
SDC1-205ENST00000447124 PYGO2Q9BRQ0 406 aa14.48□□□□□ -0.09
SDC1-205ENST00000447124 ATG101Q9BSB4 218 aa14.48□□□□□ -0.09
SDC1-205ENST00000447124 GAGE12BA1L429 117 aa14.47□□□□□ -0.09
SDC1-205ENST00000447124 C7orf71A4D174 169 aa14.47□□□□□ -0.09
SDC1-205ENST00000447124 GAGE7O76087 117 aa14.47□□□□□ -0.09
SDC1-205ENST00000447124 SLC25A5P05141 298 aaKnown RBP14.47□□□□□ -0.09
SDC1-205ENST00000447124 GAGE12FP0CL80 117 aa14.47□□□□□ -0.09
SDC1-205ENST00000447124 GAGE12GP0CL81 117 aa14.47□□□□□ -0.09
SDC1-205ENST00000447124 GAGE12IP0CL82 117 aa14.47□□□□□ -0.09
SDC1-205ENST00000447124 HOXA5P20719 270 aa14.47□□□□□ -0.09
SDC1-205ENST00000447124 FXYD5Q96DB9 178 aa14.47□□□□□ -0.09
SDC1-205ENST00000447124 VGLL1Q99990 258 aa14.47□□□□□ -0.09
SDC1-205ENST00000447124 OR51M1Q9H341 326 aa14.47□□□□□ -0.09
SDC1-205ENST00000447124 LINC00588Q9Y4M8 146 aa14.47□□□□□ -0.09
SDC1-205ENST00000447124 BTN1A1Q13410 526 aa14.46□□□□□ -0.09
SDC1-205ENST00000447124 OR5I1Q13606 314 aa14.46□□□□□ -0.09
SDC1-205ENST00000447124 FAM122CQ6P4D5 195 aa14.46□□□□□ -0.09
SDC1-205ENST00000447124 C9orf47Q6ZRZ4 202 aa14.46□□□□□ -0.09
SDC1-205ENST00000447124 RYR1P21817 5038 aa14.46□□□□□ -0.1
SDC1-205ENST00000447124 IGKV2-40A0A087WW87 121 aaPredicted RBP14.45□□□□□ -0.1
SDC1-205ENST00000447124 SNURFLB1AK76 121 aa14.45□□□□□ -0.1
SDC1-205ENST00000447124 MPC2O95563 127 aa14.45□□□□□ -0.1
SDC1-205ENST00000447124 IGKV2D-40P01614 121 aaPredicted RBP14.45□□□□□ -0.1
SDC1-205ENST00000447124 CRISP2P16562 243 aa14.45□□□□□ -0.1
SDC1-205ENST00000447124 RNASE4P34096 147 aaKnown RBP14.45□□□□□ -0.1
SDC1-205ENST00000447124 DAZ2Q13117 558 aaKnown RBP14.45□□□□□ -0.1
SDC1-205ENST00000447124 C1orf134Q5TEV5 83 aa14.45□□□□□ -0.1
SDC1-205ENST00000447124 Q6ZQT7 251 aa14.45□□□□□ -0.1
SDC1-205ENST00000447124 Q6ZTI0 123 aa14.45□□□□□ -0.1
SDC1-205ENST00000447124 C11orf72Q8NBR9 251 aa14.45□□□□□ -0.1
SDC1-205ENST00000447124 ZNF503Q96F45 646 aa14.45□□□□□ -0.1
SDC1-205ENST00000447124 PAXXQ9BUH6 204 aa14.45□□□□□ -0.1
SDC1-205ENST00000447124 FUT9Q9Y231 359 aa14.45□□□□□ -0.1
SDC1-205ENST00000447124 TRAV26-1A0A087WT03 109 aa14.44□□□□□ -0.1
SDC1-205ENST00000447124 OR10J4P0C629 311 aa14.44□□□□□ -0.1
SDC1-205ENST00000447124 PRR9Q5T870 116 aa14.44□□□□□ -0.1
SDC1-205ENST00000447124 ZFAND2AQ8N6M9 145 aa14.44□□□□□ -0.1
SDC1-205ENST00000447124 ATP5SQ99766 215 aa14.44□□□□□ -0.1
SDC1-205ENST00000447124 LINC00467Q9BRT7 94 aa14.44□□□□□ -0.1
SDC1-205ENST00000447124 MRPL32Q9BYC8 188 aaKnown RBP14.44□□□□□ -0.1
SDC1-205ENST00000447124 AAMDCQ9H7C9 122 aa14.44□□□□□ -0.1
SDC1-205ENST00000447124 GSN-AS1Q9NRJ2 163 aa14.44□□□□□ -0.1
SDC1-205ENST00000447124 HSPB11Q9Y547 144 aa14.44□□□□□ -0.1
SDC1-205ENST00000447124 PCLOQ9Y6V0 5065 aa14.44□□□□□ -0.1
SDC1-205ENST00000447124 A0A0J9YY99 117 aa14.43□□□□□ -0.1
SDC1-205ENST00000447124 SSNA1O43805 119 aa14.43□□□□□ -0.1
SDC1-205ENST00000447124 CCL18P55774 89 aa14.43□□□□□ -0.1
SDC1-205ENST00000447124 RXFP4Q8TDU9 374 aa14.43□□□□□ -0.1
SDC1-205ENST00000447124 PHYHIPLQ96FC7 376 aa14.43□□□□□ -0.1
SDC1-205ENST00000447124 ZNF492Q9P255 531 aa14.43□□□□□ -0.1
SDC1-205ENST00000447124 NBDYA0A0U1RRE5 68 aa14.42□□□□□ -0.1
SDC1-205ENST00000447124 GNPNAT1Q96EK6 184 aaPredicted RBP14.42□□□□□ -0.1
SDC1-205ENST00000447124 SMIM3Q9BZL3 60 aa14.42□□□□□ -0.1
SDC1-205ENST00000447124 WFDC1Q9HC57 220 aa14.42□□□□□ -0.1
SDC1-205ENST00000447124 C17orf112F2Z3M2 114 aa14.41□□□□□ -0.1
SDC1-205ENST00000447124 EIF3GO75821 320 aaKnown RBP eCLIP14.41□□□□□ -0.1
SDC1-205ENST00000447124 GPX1P07203 203 aa14.41□□□□□ -0.1
SDC1-205ENST00000447124 M6PRP20645 277 aa14.41□□□□□ -0.1
SDC1-205ENST00000447124 RPL12P30050 165 aaKnown RBP14.41□□□□□ -0.1
SDC1-205ENST00000447124 ANXA2RQ3ZCQ2 193 aa14.41□□□□□ -0.1
SDC1-205ENST00000447124 SSX7Q7RTT5 188 aa14.41□□□□□ -0.1
SDC1-205ENST00000447124 EIF4E3Q8N5X7 224 aaKnown RBP14.41□□□□□ -0.1
SDC1-205ENST00000447124 TMPRSS5Q9H3S3 457 aa14.41□□□□□ -0.1
SDC1-205ENST00000447124 KCNIP2Q9NS61 270 aa14.41□□□□□ -0.1
SDC1-205ENST00000447124 TP53TG3Q9ULZ0 132 aa14.41□□□□□ -0.1
SDC1-205ENST00000447124 KLF12Q9Y4X4 402 aa14.41□□□□□ -0.1
SDC1-205ENST00000447124 NMBP08949 121 aa14.4□□□□□ -0.1
SDC1-205ENST00000447124 DEFA1P59665 94 aa14.4□□□□□ -0.1
SDC1-205ENST00000447124 DEFA3P59666 94 aa14.4□□□□□ -0.1
SDC1-205ENST00000447124 RANP62826 216 aaKnown RBP14.4□□□□□ -0.1
SDC1-205ENST00000447124 SOHLH1Q5JUK2 328 aa14.4□□□□□ -0.1
SDC1-205ENST00000447124 FFAR4Q5NUL3 377 aa14.4□□□□□ -0.1
SDC1-205ENST00000447124 TMEM78Q5T7P6 136 aa14.4□□□□□ -0.1
SDC1-205ENST00000447124 MBD2Q9UBB5 411 aa14.4□□□□□ -0.1
SDC1-205ENST00000447124 ESRGQ1W209 222 aa14.39□□□□□ -0.11
SDC1-205ENST00000447124 VSIG2Q96IQ7 327 aa14.39□□□□□ -0.11
SDC1-205ENST00000447124 OR7C2O60412 319 aa14.38□□□□□ -0.11
SDC1-205ENST00000447124 SPINK4O60575 86 aa14.38□□□□□ -0.11
SDC1-205ENST00000447124 ZNF138P52744 262 aa14.38□□□□□ -0.11
SDC1-205ENST00000447124 TNP2Q05952 138 aa14.38□□□□□ -0.11
SDC1-205ENST00000447124 ZNF680Q8NEM1 530 aa14.38□□□□□ -0.11
SDC1-205ENST00000447124 Q8TAT8 98 aa14.38□□□□□ -0.11
SDC1-205ENST00000447124 C18orf15Q96N68 181 aa14.38□□□□□ -0.11
SDC1-205ENST00000447124 Q9H8V8 135 aa14.38□□□□□ -0.11
SDC1-205ENST00000447124 MUC4Q99102 2169 aa14.38□□□□□ -0.11
SDC1-205ENST00000447124 TRGV1A0A0A0MS02 117 aa14.37□□□□□ -0.11
SDC1-205ENST00000447124 IFNA5P01569 189 aa14.37□□□□□ -0.11
SDC1-205ENST00000447124 TCL1AP56279 114 aa14.37□□□□□ -0.11
SDC1-205ENST00000447124 SCGB1C1Q8TD33 95 aa14.37□□□□□ -0.11
SDC1-205ENST00000447124 Q9H3A6 140 aa14.37□□□□□ -0.11
SDC1-205ENST00000447124 LRP1BQ9NZR2 4599 aa14.36□□□□□ -0.11
SDC1-205ENST00000447124 IGHV1OR15-1A0A075B7D0 117 aa14.36□□□□□ -0.11
SDC1-205ENST00000447124 H3BNG1 76 aa14.36□□□□□ -0.11
SDC1-205ENST00000447124 LYPD1Q8N2G4 141 aa14.36□□□□□ -0.11
SDC1-205ENST00000447124 C6orf223Q8N319 242 aa14.36□□□□□ -0.11
SDC1-205ENST00000447124 TRGV2A0A075B6R0 118 aa14.35□□□□□ -0.11
SDC1-205ENST00000447124 TRBV7-9A0A0J9YWB2 115 aa14.35□□□□□ -0.11
SDC1-205ENST00000447124 RGS13O14921 159 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms