RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 CMTM2Q8TAZ6 248 aa15.9■□□□□ 0.14
APOE-204ENST00000446996 MBD3L1Q8WWY6 194 aa15.9■□□□□ 0.14
APOE-204ENST00000446996 FAM19A4Q96LR4 140 aa15.9■□□□□ 0.14
APOE-204ENST00000446996 DNAH7Q8WXX0 4024 aa15.89■□□□□ 0.13
APOE-204ENST00000446996 RAB5CP51148 216 aa15.89■□□□□ 0.13
APOE-204ENST00000446996 TMEM78Q5T7P6 136 aa15.89■□□□□ 0.13
APOE-204ENST00000446996 TMED6Q8WW62 240 aa15.89■□□□□ 0.13
APOE-204ENST00000446996 SERTM2A0A1B0GWG4 89 aa15.88■□□□□ 0.13
APOE-204ENST00000446996 MAP1LC3B2A6NCE7 125 aa15.88■□□□□ 0.13
APOE-204ENST00000446996 PRB4P10163 310 aaPredicted RBP15.88■□□□□ 0.13
APOE-204ENST00000446996 CRISP2P16562 243 aa15.88■□□□□ 0.13
APOE-204ENST00000446996 ERCC8Q13216 396 aa15.88■□□□□ 0.13
APOE-204ENST00000446996 NKX6-2Q9C056 277 aaPredicted RBP15.88■□□□□ 0.13
APOE-204ENST00000446996 MAP1LC3BQ9GZQ8 125 aa15.88■□□□□ 0.13
APOE-204ENST00000446996 ZNF492Q9P255 531 aa15.88■□□□□ 0.13
APOE-204ENST00000446996 IGKV2-40A0A087WW87 121 aaPredicted RBP15.87■□□□□ 0.13
APOE-204ENST00000446996 IGHV4-28A0A0C4DH34 117 aa15.87■□□□□ 0.13
APOE-204ENST00000446996 TMEM189A5PLL7 270 aa15.87■□□□□ 0.13
APOE-204ENST00000446996 IGKV2D-40P01614 121 aaPredicted RBP15.87■□□□□ 0.13
APOE-204ENST00000446996 C5orf17Q8NAS9 161 aa15.87■□□□□ 0.13
APOE-204ENST00000446996 VGLL1Q99990 258 aa15.87■□□□□ 0.13
APOE-204ENST00000446996 LENEPQ9Y5L5 61 aa15.87■□□□□ 0.13
APOE-204ENST00000446996 TRAV12-2A0A075B6T6 113 aa15.86■□□□□ 0.13
APOE-204ENST00000446996 HBE1P02100 147 aa15.86■□□□□ 0.13
APOE-204ENST00000446996 RBMY1A1P0DJD3 496 aaKnown RBP15.86■□□□□ 0.13
APOE-204ENST00000446996 RBMY1CP0DJD4 496 aa15.86■□□□□ 0.13
APOE-204ENST00000446996 ZNF138P52744 262 aa15.86■□□□□ 0.13
APOE-204ENST00000446996 RBMY1FQ15415 496 aaKnown RBP15.86■□□□□ 0.13
APOE-204ENST00000446996 TMEM208Q9BTX3 173 aa15.86■□□□□ 0.13
APOE-204ENST00000446996 KLLNB2CW77 178 aa15.85■□□□□ 0.13
APOE-204ENST00000446996 FHITP49789 147 aa15.85■□□□□ 0.13
APOE-204ENST00000446996 SUMO1P63165 101 aaKnown RBP15.85■□□□□ 0.13
APOE-204ENST00000446996 FAM213BQ8TBF2 198 aa15.85■□□□□ 0.13
APOE-204ENST00000446996 ARL2-SNX15V9GYD0 113 aa15.85■□□□□ 0.13
APOE-204ENST00000446996 IGHV3OR16-12A0A075B7B8 117 aa15.84■□□□□ 0.13
APOE-204ENST00000446996 SULT1A2P50226 295 aa15.84■□□□□ 0.13
APOE-204ENST00000446996 FGF8P55075 233 aaPredicted RBP15.84■□□□□ 0.13
APOE-204ENST00000446996 RRN3P1Q2M238 152 aa15.84■□□□□ 0.13
APOE-204ENST00000446996 GFI1BQ5VTD9 330 aa15.84■□□□□ 0.13
APOE-204ENST00000446996 IQCF2Q8IXL9 164 aa15.84■□□□□ 0.13
APOE-204ENST00000446996 TMPRSS5Q9H3S3 457 aa15.84■□□□□ 0.13
APOE-204ENST00000446996 RYR3Q15413 4870 aa15.84■□□□□ 0.13
APOE-204ENST00000446996 H7BYZ3 331 aa15.83■□□□□ 0.12
APOE-204ENST00000446996 H2AFB1P0C5Y9 115 aa15.83■□□□□ 0.12
APOE-204ENST00000446996 TAS2R60P59551 318 aa15.83■□□□□ 0.12
APOE-204ENST00000446996 SFT2D1Q8WV19 159 aa15.83■□□□□ 0.12
APOE-204ENST00000446996 LINC01587Q99440 93 aa15.83■□□□□ 0.12
APOE-204ENST00000446996 FBLL1A6NHQ2 334 aaKnown RBP15.82■□□□□ 0.12
APOE-204ENST00000446996 GGTLC3B5MD39 225 aa15.82■□□□□ 0.12
APOE-204ENST00000446996 K7EQM0 130 aa15.82■□□□□ 0.12
APOE-204ENST00000446996 TCRAP04437 139 aa15.82■□□□□ 0.12
APOE-204ENST00000446996 EPDR1Q9UM22 224 aa15.82■□□□□ 0.12
APOE-204ENST00000446996 C7orf71A4D174 169 aa15.81■□□□□ 0.12
APOE-204ENST00000446996 FAM74A7A6NL05 159 aa15.81■□□□□ 0.12
APOE-204ENST00000446996 PPT1P50897 306 aa15.81■□□□□ 0.12
APOE-204ENST00000446996 KIR3DS1Q14943 382 aa15.81■□□□□ 0.12
APOE-204ENST00000446996 GOLT1AQ6ZVE7 132 aa15.81■□□□□ 0.12
APOE-204ENST00000446996 ZFAND2AQ8N6M9 145 aa15.81■□□□□ 0.12
APOE-204ENST00000446996 C11orf45Q8TAV5 145 aa15.81■□□□□ 0.12
APOE-204ENST00000446996 TCEAL7Q9BRU2 100 aa15.81■□□□□ 0.12
APOE-204ENST00000446996 NIPSNAP3BQ9BS92 247 aa15.81■□□□□ 0.12
APOE-204ENST00000446996 TRAV1-1A0A0B4J248 108 aa15.8■□□□□ 0.12
APOE-204ENST00000446996 DEFB4AO15263 64 aa15.8■□□□□ 0.12
APOE-204ENST00000446996 GPX1P07203 203 aa15.8■□□□□ 0.12
APOE-204ENST00000446996 YTHDF2Q9Y5A9 579 aaKnown RBP15.8■□□□□ 0.12
APOE-204ENST00000446996 TEX48A0A1B0GUV7 120 aa15.79■□□□□ 0.12
APOE-204ENST00000446996 LOC102723971A0A1B0GUV8 181 aa15.79■□□□□ 0.12
APOE-204ENST00000446996 ZNF324O75467 553 aaPredicted RBP15.79■□□□□ 0.12
APOE-204ENST00000446996 CASC10Q5T4H9 136 aa15.79■□□□□ 0.12
APOE-204ENST00000446996 ZNF493Q6ZR52 646 aa15.79■□□□□ 0.12
APOE-204ENST00000446996 PYGO2Q9BRQ0 406 aa15.79■□□□□ 0.12
APOE-204ENST00000446996 LINC00467Q9BRT7 94 aa15.79■□□□□ 0.12
APOE-204ENST00000446996 ATG101Q9BSB4 218 aa15.79■□□□□ 0.12
APOE-204ENST00000446996 RPH3ALQ9UNE2 315 aa15.79■□□□□ 0.12
APOE-204ENST00000446996 CXorf65A6NEN9 183 aa15.78■□□□□ 0.12
APOE-204ENST00000446996 TEX46H3BTG2 121 aa15.78■□□□□ 0.12
APOE-204ENST00000446996 GNG5P63218 68 aa15.78■□□□□ 0.12
APOE-204ENST00000446996 CYB561D1Q8N8Q1 229 aa15.78■□□□□ 0.12
APOE-204ENST00000446996 HIST1H2BAQ96A08 127 aa15.78■□□□□ 0.12
APOE-204ENST00000446996 TRAV12-3A0A0B4J271 114 aa15.77■□□□□ 0.12
APOE-204ENST00000446996 ZNF705GA8MUZ8 300 aaPredicted RBP15.77■□□□□ 0.12
APOE-204ENST00000446996 J3KRW8 73 aa15.77■□□□□ 0.12
APOE-204ENST00000446996 UBE2G2P60604 165 aa15.77■□□□□ 0.12
APOE-204ENST00000446996 CCDC28AQ8IWP9 274 aa15.77■□□□□ 0.12
APOE-204ENST00000446996 TMEM75Q8N9X5 138 aa15.77■□□□□ 0.12
APOE-204ENST00000446996 Q8TAT8 98 aa15.77■□□□□ 0.12
APOE-204ENST00000446996 C16orf74Q96GX8 76 aa15.77■□□□□ 0.12
APOE-204ENST00000446996 SPART-AS1P0CW21 52 aa15.76■□□□□ 0.11
APOE-204ENST00000446996 F6UZH7 168 aa15.75■□□□□ 0.11
APOE-204ENST00000446996 IFNA7P01567 189 aa15.75■□□□□ 0.11
APOE-204ENST00000446996 RNASE4P34096 147 aaKnown RBP15.75■□□□□ 0.11
APOE-204ENST00000446996 NKX2-5P52952 324 aaPredicted RBP15.75■□□□□ 0.11
APOE-204ENST00000446996 BTN1A1Q13410 526 aa15.75■□□□□ 0.11
APOE-204ENST00000446996 PMS2P11Q13670 270 aa15.75■□□□□ 0.11
APOE-204ENST00000446996 Q6AWC8 147 aa15.75■□□□□ 0.11
APOE-204ENST00000446996 TMEM263Q8WUH6 116 aaKnown RBP15.75■□□□□ 0.11
APOE-204ENST00000446996 DKK2Q9UBU2 259 aa15.75■□□□□ 0.11
APOE-204ENST00000446996 AZU1P20160 251 aa15.74■□□□□ 0.11
APOE-204ENST00000446996 NANOS2P60321 138 aaKnown RBP15.74■□□□□ 0.11
APOE-204ENST00000446996 FLI1Q01543 452 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms