RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 HERV-K104P63124 156 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 CENPEQ02224 2701 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 TCF15Q12870 199 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 SMRP1Q8NCR6 262 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 TMEM167AQ8TBQ9 72 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 VWCEQ96DN2 955 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 FAM167A-AS1Q96KT0 104 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 H3BMM0 161 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 NPYP01303 97 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 GTSF1Q8WW33 167 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 UBE2WQ96B02 151 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 TMEM141Q96I45 108 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 FAM90A27PA6NNH2 459 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 PRB3Q04118 309 aaPredicted RBP6.34□□□□□ -1.39
SMG1-202ENST00000446231 DENND4CQ5VZ89 1909 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 PAPPA2Q9BXP8 1791 aa6.34□□□□□ -1.39
SMG1-202ENST00000446231 ZNF474Q6S9Z5 364 aaPredicted RBP6.34□□□□□ -1.4
SMG1-202ENST00000446231 PLXNB3Q9ULL4 1909 aa6.34□□□□□ -1.4
SMG1-202ENST00000446231 TRBV25-1A0A075B6N4 114 aa6.34□□□□□ -1.4
SMG1-202ENST00000446231 J3KT08 172 aa6.34□□□□□ -1.4
SMG1-202ENST00000446231 C8orf49Q96NF6 230 aa6.34□□□□□ -1.4
SMG1-202ENST00000446231 OVOL2Q9BRP0 275 aa6.34□□□□□ -1.4
SMG1-202ENST00000446231 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.33□□□□□ -1.4
SMG1-202ENST00000446231 NDUFA4L2Q9NRX3 87 aa6.33□□□□□ -1.4
SMG1-202ENST00000446231 TRBV19A0A075B6N1 114 aa6.33□□□□□ -1.4
SMG1-202ENST00000446231 ATP6V0E2Q8NHE4 81 aa6.33□□□□□ -1.4
SMG1-202ENST00000446231 COL5A3P25940 1745 aaPredicted RBP6.33□□□□□ -1.4
SMG1-202ENST00000446231 DPM3Q9P2X0 92 aa6.33□□□□□ -1.4
SMG1-202ENST00000446231 GLRXP35754 106 aa6.33□□□□□ -1.4
SMG1-202ENST00000446231 METRNQ9UJH8 293 aa6.33□□□□□ -1.4
SMG1-202ENST00000446231 FOXG1P55316 489 aaPredicted RBP6.33□□□□□ -1.4
SMG1-202ENST00000446231 IGKV1-16P04430 117 aa6.33□□□□□ -1.4
SMG1-202ENST00000446231 ZNF784Q8NCA9 323 aaPredicted RBP6.33□□□□□ -1.4
SMG1-202ENST00000446231 IGKV1D-17A0A075B6S4 117 aa6.33□□□□□ -1.4
SMG1-202ENST00000446231 PDE6HQ13956 83 aa6.33□□□□□ -1.4
SMG1-202ENST00000446231 SAP25Q8TEE9 199 aa6.33□□□□□ -1.4
SMG1-202ENST00000446231 SLC25A15Q9Y619 301 aa6.33□□□□□ -1.4
SMG1-202ENST00000446231 TRAV21A0A0B4J279 112 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 DUX5Q96PT3 197 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 KHDC1LQ5JSQ8 128 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 GFRALQ6UXV0 394 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 A0A1W2PPI3 338 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 COLCA1Q6ZS62 124 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 FAM106AQ4KMX7 169 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 TRAV8-3A0A0A6YYJ7 113 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 SHANK3Q9BYB0 1731 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 EPOPA6NHQ4 379 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 CFC1BP0CG36 223 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 CFC1P0CG37 223 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 MORN5Q5VZ52 161 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 MOB4Q9Y3A3 225 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 IL17RELQ6ZVW7 336 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 FASNP49327 2511 aaKnown RBP6.32□□□□□ -1.4
SMG1-202ENST00000446231 IGHV3-64A0A075B6Q5 118 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 F8VRH5 84 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 NPFFO15130 113 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 NBR2O15453 112 aa6.32□□□□□ -1.4
SMG1-202ENST00000446231 A0A1B0GXF2 115 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 Q8N976 141 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 LTBP4Q8N2S1 1624 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 K7EMI3 77 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 CD28P10747 220 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 SNRPD3P62318 126 aaKnown RBP6.31□□□□□ -1.4
SMG1-202ENST00000446231 S100A7L2Q5SY68 101 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 NEGR1Q7Z3B1 354 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 ODF3L1Q8IXM7 274 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 RNF5Q99942 180 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 ADAMTS9Q9P2N4 1935 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 IGLV2-14P01704 120 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 MRPL14Q6P1L8 145 aaKnown RBP6.31□□□□□ -1.4
SMG1-202ENST00000446231 ZNF134P52741 427 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 ANKRD29Q8N6D5 301 aa6.31□□□□□ -1.4
SMG1-202ENST00000446231 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 C5orf64Q2M2E5 130 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 NRXN2Q9P2S2 1712 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 SRRM4A7MD48 611 aaKnown RBP6.3□□□□□ -1.4
SMG1-202ENST00000446231 KLK10O43240 276 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 SIGLEC9Q9Y336 463 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 SRRM5B3KS81 715 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 LINC00310P59036 64 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 TMEM200BQ69YZ2 307 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 IGFL4Q6B9Z1 124 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 LY6G5BQ8NDX9 201 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 MAST4O15021 2626 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 PLXNA4Q9HCM2 1894 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 TRGV3P03979 118 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 FGF6P10767 208 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 CCL3L1P16619 93 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 PIMREGQ9BSJ6 248 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 TRAV26-2A0A0B4J265 109 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 UFSP1Q6NVU6 142 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 DDB2Q92466 427 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 THAP8Q8NA92 274 aa6.3□□□□□ -1.4
SMG1-202ENST00000446231 TIMM21Q9BVV7 248 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 P0C879 139 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 C9orf106Q8NAJ2 232 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 GAFA1Q96PS6 74 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 OVOL1O14753 267 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 IGLV2-8P01709 118 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 CLEC19AQ6UXS0 136 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms