RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 CST11Q9H112 138 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 TRAV30A0A087WSZ9 112 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 TRAV40A0A0B4J280 105 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 TMEM218A2RU14 115 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 C9JAW5 83 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 MCRIP1C9JLW8 97 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.56□□□□□ -1.68
MCF2-206ENST00000446225 PEX7O00628 323 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 SOCS1O15524 211 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 IGHV1-69P01742 117 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 CGB3P0DN86 165 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 CGB7P0DN87 165 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 IL15RAQ13261 267 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 BTN1A1Q13410 526 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 IBA57Q5T440 356 aaKnown RBP4.56□□□□□ -1.68
MCF2-206ENST00000446225 SCGB1D4Q6XE38 83 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 TRAPPC6BQ86SZ2 158 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 SLC25A42Q86VD7 318 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 H1FOOQ8IZA3 346 aaPredicted RBP4.56□□□□□ -1.68
MCF2-206ENST00000446225 TMEM229BQ8NBD8 167 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 GPR146Q96CH1 333 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 KRTAP17-1Q9BYP8 105 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 IFI27L2Q9H2X8 130 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 ZNF702PQ9H963 129 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 HIGD1AQ9Y241 93 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 LINC00312Q9Y6C7 94 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 TRGV10A0A0A0MS01 117 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 MDFIC2A0A1B0GVS7 189 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 TMEM30CPA0ZSE6 113 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 RBFOX2O43251 390 aaKnown RBP eCLIP4.55□□□□□ -1.68
MCF2-206ENST00000446225 NDUFS5O43920 106 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 IGHV3-23P01764 117 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 SCTP09683 121 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 LDLRAD2Q5SZI1 272 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 CASC10Q5T4H9 136 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 ZNF497Q6ZNH5 498 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 C6orf201Q7Z4U5 140 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 OR8I2Q8N0Y5 310 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 TCTEX1D1Q8N7M0 179 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 SIGLECL1Q8N7X8 197 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 ZNF714Q96N38 554 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 SLC25A2Q9BXI2 301 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 SNHG12Q9BXW3 62 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 NKX6-2Q9C056 277 aaPredicted RBP4.55□□□□□ -1.68
MCF2-206ENST00000446225 C2CD3Q4AC94 2353 aa4.55□□□□□ -1.68
MCF2-206ENST00000446225 NPFFO15130 113 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 IGHV1-8P0DP01 117 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 HERPUD1Q15011 391 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 JOSD1Q15040 202 aaPredicted RBP4.54□□□□□ -1.68
MCF2-206ENST00000446225 RBMY1FQ15415 496 aaKnown RBP4.54□□□□□ -1.68
MCF2-206ENST00000446225 DEFB112Q30KQ8 113 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 PRSS54Q6PEW0 395 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 UBALD1Q8TB05 177 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 ARHGAP5-AS1Q96IT6 56 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 ATG5Q9H1Y0 275 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 SCRT2Q9NQ03 307 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 CUBNO60494 3623 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 PLAC8L1A1L4L8 177 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 RBP4P02753 201 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 SMIM17P0DL12 118 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 SYNJ2BPP57105 145 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 DAD1P61803 113 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 RHEBQ15382 184 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 HEPN1Q6WQI6 88 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 MRPL30Q8TCC3 161 aaKnown RBP4.54□□□□□ -1.68
MCF2-206ENST00000446225 LEAP2Q969E1 77 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 HDHD3Q9BSH5 251 aaPredicted RBP4.54□□□□□ -1.68
MCF2-206ENST00000446225 TMEM147Q9BVK8 224 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 TMEM133Q9H2Q1 129 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 LINC00574Q9H8X3 128 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 AK3Q9UIJ7 227 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 WASHC3Q9Y3C0 194 aa4.54□□□□□ -1.68
MCF2-206ENST00000446225 GABARAPO95166 117 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 TRBV12-3P01733 135 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 IGHV3-7P01780 117 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 NFYBP25208 207 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 PSMB2P49721 201 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 HLA-DRB3P79483 266 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 SCGB2B2Q4G0G5 96 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 CLEC19AQ6UXS0 136 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 EXOC3-AS1Q8N2X6 119 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 C7orf33Q8WU49 177 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 SLC25A46Q96AG3 418 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 PHYHIPLQ96FC7 376 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 OPRPNQ99935 248 aaPredicted RBP4.53□□□□□ -1.68
MCF2-206ENST00000446225 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 ZNF286AQ9HBT8 521 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 ZNRD1Q9P1U0 126 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 ATRQ13535 2644 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 KIAA2026Q5HYC2 2103 aa4.53□□□□□ -1.68
MCF2-206ENST00000446225 IGHV2-26A0A0B4J1V2 119 aa4.52□□□□□ -1.69
MCF2-206ENST00000446225 ODF3BA8MYP8 253 aa4.52□□□□□ -1.69
MCF2-206ENST00000446225 PSPHP1O15172 72 aa4.52□□□□□ -1.69
MCF2-206ENST00000446225 SERF1AO75920 110 aa4.52□□□□□ -1.69
MCF2-206ENST00000446225 NAPSAO96009 420 aa4.52□□□□□ -1.69
MCF2-206ENST00000446225 IFITM3Q01628 133 aa4.52□□□□□ -1.69
MCF2-206ENST00000446225 C12orf74Q32Q52 190 aa4.52□□□□□ -1.69
MCF2-206ENST00000446225 C6orf99Q4VX62 202 aa4.52□□□□□ -1.69
MCF2-206ENST00000446225 SGPP2Q8IWX5 399 aa4.52□□□□□ -1.69
MCF2-206ENST00000446225 DYNAPQ8N1N2 210 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms