RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 TMEM178BH3BS89 294 aa14.98□□□□□ -0.01
SHANK3-203ENST00000445220 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.98□□□□□ -0.01
SHANK3-203ENST00000445220 PRSS22Q9GZN4 317 aa14.98□□□□□ -0.01
SHANK3-203ENST00000445220 TMEM126AQ9H061 195 aa14.98□□□□□ -0.01
SHANK3-203ENST00000445220 NDUFS7O75251 213 aa14.97□□□□□ -0.01
SHANK3-203ENST00000445220 NDPQ00604 133 aa14.97□□□□□ -0.01
SHANK3-203ENST00000445220 NPYP01303 97 aa14.97□□□□□ -0.01
SHANK3-203ENST00000445220 SMIM20Q8N5G0 67 aa14.97□□□□□ -0.01
SHANK3-203ENST00000445220 SAP30O75446 220 aa14.97□□□□□ -0.01
SHANK3-203ENST00000445220 MINOS1Q5TGZ0 78 aa14.96□□□□□ -0.01
SHANK3-203ENST00000445220 Q6ZS92 163 aa14.96□□□□□ -0.01
SHANK3-203ENST00000445220 MINOS1-NBL1R4GNA1 71 aa14.96□□□□□ -0.01
SHANK3-203ENST00000445220 K7EN84 100 aa14.96□□□□□ -0.01
SHANK3-203ENST00000445220 IGHG4P01861 327 aa14.96□□□□□ -0.01
SHANK3-203ENST00000445220 DSCR9P59020 149 aa14.96□□□□□ -0.01
SHANK3-203ENST00000445220 NDUFA4L2Q9NRX3 87 aa14.96□□□□□ -0.01
SHANK3-203ENST00000445220 DKK2Q9UBU2 259 aa14.96□□□□□ -0.01
SHANK3-203ENST00000445220 LINC00527Q9UJ94 153 aa14.96□□□□□ -0.01
SHANK3-203ENST00000445220 BUB1B-PAK6H3BSN5 160 aa14.96□□□□□ -0.01
SHANK3-203ENST00000445220 MED12Q93074 2177 aa14.96□□□□□ -0.02
SHANK3-203ENST00000445220 ABCA1O95477 2261 aa14.96□□□□□ -0.02
SHANK3-203ENST00000445220 DOCK9Q9BZ29 2069 aa14.95□□□□□ -0.02
SHANK3-203ENST00000445220 WIPF3A6NGB9 483 aa14.95□□□□□ -0.02
SHANK3-203ENST00000445220 EFNA4P52798 201 aa14.95□□□□□ -0.02
SHANK3-203ENST00000445220 IL17RELQ6ZVW7 336 aa14.95□□□□□ -0.02
SHANK3-203ENST00000445220 A0A087WX48 190 aa14.94□□□□□ -0.02
SHANK3-203ENST00000445220 LMO1P25800 156 aa14.94□□□□□ -0.02
SHANK3-203ENST00000445220 DTX2Q86UW9 622 aa14.94□□□□□ -0.02
SHANK3-203ENST00000445220 DTX1Q86Y01 620 aa14.94□□□□□ -0.02
SHANK3-203ENST00000445220 SH2D6Q7Z4S9 175 aa14.94□□□□□ -0.02
SHANK3-203ENST00000445220 MRAPQ8TCY5 172 aa14.94□□□□□ -0.02
SHANK3-203ENST00000445220 PRR25Q96S07 402 aa14.94□□□□□ -0.02
SHANK3-203ENST00000445220 SMIM2Q9BVW6 85 aa14.94□□□□□ -0.02
SHANK3-203ENST00000445220 TMEM14CQ9P0S9 112 aa14.94□□□□□ -0.02
SHANK3-203ENST00000445220 VMO1Q7Z5L0 202 aa14.93□□□□□ -0.02
SHANK3-203ENST00000445220 NDUFA12Q9UI09 145 aa14.93□□□□□ -0.02
SHANK3-203ENST00000445220 NBASA2RRP1 2371 aa14.93□□□□□ -0.02
SHANK3-203ENST00000445220 TRGV1A0A0A0MS02 117 aa14.93□□□□□ -0.02
SHANK3-203ENST00000445220 TDRG1Q3Y452 100 aa14.93□□□□□ -0.02
SHANK3-203ENST00000445220 SPTAN1Q13813 2472 aaKnown RBP14.93□□□□□ -0.02
SHANK3-203ENST00000445220 NDUFB8O95169 186 aa14.92□□□□□ -0.02
SHANK3-203ENST00000445220 J3QQQ9 107 aa14.92□□□□□ -0.02
SHANK3-203ENST00000445220 NUPR1O60356 82 aa14.92□□□□□ -0.02
SHANK3-203ENST00000445220 PCP2Q8IVA1 136 aa14.92□□□□□ -0.02
SHANK3-203ENST00000445220 INS-IGF2F8WCM5 200 aa14.92□□□□□ -0.02
SHANK3-203ENST00000445220 INSP01308 110 aa14.92□□□□□ -0.02
SHANK3-203ENST00000445220 CRYBA4P53673 196 aa14.92□□□□□ -0.02
SHANK3-203ENST00000445220 KIAA2026Q5HYC2 2103 aa14.92□□□□□ -0.02
SHANK3-203ENST00000445220 IGLL5B9A064 214 aa14.91□□□□□ -0.02
SHANK3-203ENST00000445220 M0R1W7 72 aa14.91□□□□□ -0.02
SHANK3-203ENST00000445220 IGLC1P0CG04 106 aa14.91□□□□□ -0.02
SHANK3-203ENST00000445220 SDHAF1A6NFY7 115 aa14.91□□□□□ -0.02
SHANK3-203ENST00000445220 ANXA2RQ3ZCQ2 193 aa14.91□□□□□ -0.02
SHANK3-203ENST00000445220 A0A0G2JNJ9 132 aa14.9□□□□□ -0.02
SHANK3-203ENST00000445220 I3L3M4 83 aa14.9□□□□□ -0.02
SHANK3-203ENST00000445220 CFC1BP0CG36 223 aa14.9□□□□□ -0.02
SHANK3-203ENST00000445220 CFC1P0CG37 223 aa14.9□□□□□ -0.02
SHANK3-203ENST00000445220 Q9UFV3 132 aa14.9□□□□□ -0.02
SHANK3-203ENST00000445220 SPTBN1Q01082 2364 aaKnown RBP14.9□□□□□ -0.02
SHANK3-203ENST00000445220 ZC2HC1AQ96GY0 325 aa14.9□□□□□ -0.02
SHANK3-203ENST00000445220 HAMPP81172 84 aa14.9□□□□□ -0.02
SHANK3-203ENST00000445220 FOXI2Q6ZQN5 318 aa14.9□□□□□ -0.02
SHANK3-203ENST00000445220 PRR20EP86478 221 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 PRR20CP86479 221 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 PRR20DP86480 221 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 PRR20BP86481 221 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 PRR20AP86496 221 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 FXYD5Q96DB9 178 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 TRAV26-2A0A0B4J265 109 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 KLRD1Q13241 179 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 USMG5Q96IX5 58 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 RHPN1-AS1Q9BWJ2 59 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 TMEM258P61165 79 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 FAM223BA6NKX1 122 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 ACYP1P07311 99 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 FAM223AQ8IWN6 122 aa14.89□□□□□ -0.03
SHANK3-203ENST00000445220 RBMY1FQ15415 496 aaKnown RBP14.88□□□□□ -0.03
SHANK3-203ENST00000445220 SCRT2Q9NQ03 307 aa14.88□□□□□ -0.03
SHANK3-203ENST00000445220 A0A1W2PRX2 142 aa14.88□□□□□ -0.03
SHANK3-203ENST00000445220 F8WEM9 126 aa14.88□□□□□ -0.03
SHANK3-203ENST00000445220 LTAP01374 205 aa14.88□□□□□ -0.03
SHANK3-203ENST00000445220 CMC4P56277 68 aaPredicted RBP14.88□□□□□ -0.03
SHANK3-203ENST00000445220 SYNJ2BPP57105 145 aa14.88□□□□□ -0.03
SHANK3-203ENST00000445220 WDR81Q562E7 1941 aa14.87□□□□□ -0.03
SHANK3-203ENST00000445220 TRBV25-1A0A075B6N4 114 aa14.87□□□□□ -0.03
SHANK3-203ENST00000445220 C20orf78Q9BR46 151 aa14.87□□□□□ -0.03
SHANK3-203ENST00000445220 FANCMQ8IYD8 2048 aa14.87□□□□□ -0.03
SHANK3-203ENST00000445220 RHODO00212 210 aa14.87□□□□□ -0.03
SHANK3-203ENST00000445220 TAX1BP3O14907 124 aa14.87□□□□□ -0.03
SHANK3-203ENST00000445220 MGAMO43451 1857 aa14.87□□□□□ -0.03
SHANK3-203ENST00000445220 DOPEY2Q9Y3R5 2298 aa14.87□□□□□ -0.03
SHANK3-203ENST00000445220 LINC01545Q5VT33 79 aa14.87□□□□□ -0.03
SHANK3-203ENST00000445220 IGHV3-53P01767 116 aa14.86□□□□□ -0.03
SHANK3-203ENST00000445220 PI4KAP42356 2102 aa14.86□□□□□ -0.03
SHANK3-203ENST00000445220 H3BRN7 92 aa14.86□□□□□ -0.03
SHANK3-203ENST00000445220 TSC2P49815 1807 aa14.86□□□□□ -0.03
SHANK3-203ENST00000445220 SS18Q15532 418 aa14.86□□□□□ -0.03
SHANK3-203ENST00000445220 TMEM219Q86XT9 240 aa14.86□□□□□ -0.03
SHANK3-203ENST00000445220 RBM3P98179 157 aaKnown RBP14.86□□□□□ -0.03
SHANK3-203ENST00000445220 K7EM74 188 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms