RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CASC10Q5T4H9 136 aa7.83□□□□□ -1.16
HDAC6-211ENST00000443563 DPPA3Q6W0C5 159 aa7.83□□□□□ -1.16
HDAC6-211ENST00000443563 IQCF2Q8IXL9 164 aa7.83□□□□□ -1.16
HDAC6-211ENST00000443563 AGPAT4-IT1Q9H0P7 198 aa7.83□□□□□ -1.16
HDAC6-211ENST00000443563 IGKV2-40A0A087WW87 121 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-211ENST00000443563 TRBV7-9A0A0J9YWB2 115 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 TEX48A0A1B0GUV7 120 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 SERTM2A0A1B0GWG4 89 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 CXorf65A6NEN9 183 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 DIRC3C9JPN6 131 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 H7BYZ3 331 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 K7EQM0 130 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 DEFB4AO15263 64 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 IGKV2D-40P01614 121 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-211ENST00000443563 RBMY1A1P0DJD3 496 aaKnown RBP7.82□□□□□ -1.16
HDAC6-211ENST00000443563 RBMY1CP0DJD4 496 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 PRB4P10163 310 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-211ENST00000443563 ZNF138P52744 262 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 ERCC8Q13216 396 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 RBMY1FQ15415 496 aaKnown RBP7.82□□□□□ -1.16
HDAC6-211ENST00000443563 ZFP69Q49AA0 526 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 LINC01587Q99440 93 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 NIPSNAP3BQ9BS92 247 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 NKX6-2Q9C056 277 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-211ENST00000443563 STARD9Q9P2P6 4700 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 LENEPQ9Y5L5 61 aa7.82□□□□□ -1.16
HDAC6-211ENST00000443563 LOC102723971A0A1B0GUV8 181 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 A0A1W2PRE2 83 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 MAP1LC3B2A6NCE7 125 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 NUPR2A6NF83 97 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 GPX1P07203 203 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 CRISP2P16562 243 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 RAB5CP51148 216 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 TAS2R60P59551 318 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 ZNF726P1Q15940 193 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 GFI1BQ5VTD9 330 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 ZFAND6Q6FIF0 208 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 SSX7Q7RTT5 188 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 SLC51BQ86UW2 128 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 C5orf17Q8NAS9 161 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 TMED6Q8WW62 240 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 FAM19A4Q96LR4 140 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 VGLL1Q99990 258 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 MAP1LC3BQ9GZQ8 125 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 ZNF492Q9P255 531 aa7.81□□□□□ -1.16
HDAC6-211ENST00000443563 C7orf71A4D174 169 aa7.8□□□□□ -1.16
HDAC6-211ENST00000443563 C11orf94C9JXX5 98 aa7.8□□□□□ -1.16
HDAC6-211ENST00000443563 SPART-AS1P0CW21 52 aa7.8□□□□□ -1.16
HDAC6-211ENST00000443563 PMS2P11Q13670 270 aa7.8□□□□□ -1.16
HDAC6-211ENST00000443563 ZNF493Q6ZR52 646 aa7.8□□□□□ -1.16
HDAC6-211ENST00000443563 CCDC28AQ8IWP9 274 aa7.8□□□□□ -1.16
HDAC6-211ENST00000443563 FAM213BQ8TBF2 198 aa7.8□□□□□ -1.16
HDAC6-211ENST00000443563 C16orf74Q96GX8 76 aa7.8□□□□□ -1.16
HDAC6-211ENST00000443563 RPH3ALQ9UNE2 315 aa7.8□□□□□ -1.16
HDAC6-211ENST00000443563 KLK5Q9Y337 293 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-211ENST00000443563 LYSTQ99698 3801 aa7.8□□□□□ -1.16
HDAC6-211ENST00000443563 PLECQ15149 4684 aaKnown RBP7.79□□□□□ -1.16
HDAC6-211ENST00000443563 TRAV12-3A0A0B4J271 114 aa7.79□□□□□ -1.16
HDAC6-211ENST00000443563 A0A1B0GVG6 124 aa7.79□□□□□ -1.16
HDAC6-211ENST00000443563 FBLL1A6NHQ2 334 aaKnown RBP7.79□□□□□ -1.16
HDAC6-211ENST00000443563 ZNF705GA8MUZ8 300 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-211ENST00000443563 KLLNB2CW77 178 aa7.79□□□□□ -1.16
HDAC6-211ENST00000443563 TEX46H3BTG2 121 aa7.79□□□□□ -1.16
HDAC6-211ENST00000443563 J3KRW8 73 aa7.79□□□□□ -1.16
HDAC6-211ENST00000443563 FGF8P55075 233 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-211ENST00000443563 NANOS2P60321 138 aaKnown RBP7.79□□□□□ -1.16
HDAC6-211ENST00000443563 SUMO1P63165 101 aaKnown RBP7.79□□□□□ -1.16
HDAC6-211ENST00000443563 GOLT1AQ6ZVE7 132 aa7.79□□□□□ -1.16
HDAC6-211ENST00000443563 PHLDA1Q8WV24 401 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-211ENST00000443563 MBD3L1Q8WWY6 194 aa7.79□□□□□ -1.16
HDAC6-211ENST00000443563 PYGO2Q9BRQ0 406 aa7.79□□□□□ -1.16
HDAC6-211ENST00000443563 ARL2-SNX15V9GYD0 113 aa7.79□□□□□ -1.16
HDAC6-211ENST00000443563 LYRM9A8MSI8 78 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 IFNA7P01567 189 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 TCRAP04437 139 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 H2AFB1P0C5Y9 115 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 HTN1P15515 57 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 RNASE4P34096 147 aaKnown RBP7.78□□□□□ -1.16
HDAC6-211ENST00000443563 FHITP49789 147 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 PPT1P50897 306 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 EMP1P54849 157 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 CEMP1Q6PRD7 247 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-211ENST00000443563 C9orf62Q8N4C0 152 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 CYB561D1Q8N8Q1 229 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 TMEM263Q8WUH6 116 aaKnown RBP7.78□□□□□ -1.16
HDAC6-211ENST00000443563 SFT2D1Q8WV19 159 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 TCEAL7Q9BRU2 100 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 ATG101Q9BSB4 218 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 NDFIP1Q9BT67 221 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 TMPRSS5Q9H3S3 457 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 EPDR1Q9UM22 224 aa7.78□□□□□ -1.16
HDAC6-211ENST00000443563 TRAV10A0A0B4J240 114 aa7.77□□□□□ -1.17
HDAC6-211ENST00000443563 FAM74A7A6NL05 159 aa7.77□□□□□ -1.17
HDAC6-211ENST00000443563 GGTLC3B5MD39 225 aa7.77□□□□□ -1.17
HDAC6-211ENST00000443563 F6UZH7 168 aa7.77□□□□□ -1.17
HDAC6-211ENST00000443563 UBE2G2P60604 165 aa7.77□□□□□ -1.17
HDAC6-211ENST00000443563 GNG5P63218 68 aa7.77□□□□□ -1.17
HDAC6-211ENST00000443563 BTN1A1Q13410 526 aa7.77□□□□□ -1.17
HDAC6-211ENST00000443563 KIR3DS1Q14943 382 aa7.77□□□□□ -1.17
HDAC6-211ENST00000443563 ZFAND2AQ8N6M9 145 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms