RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SYT8Q8NBV8 401 aa9.62□□□□□ -0.87
HMGN1-208ENST00000443046 MRPL53Q96EL3 112 aaKnown RBP9.62□□□□□ -0.87
HMGN1-208ENST00000443046 LINC00477Q96M19 166 aa9.62□□□□□ -0.87
HMGN1-208ENST00000443046 CCDC59Q9P031 241 aaKnown RBP9.62□□□□□ -0.87
HMGN1-208ENST00000443046 SSSCA1O60232 199 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 COX7A2P2O60397 106 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 NMBP08949 121 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 OR4E1P0C645 316 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 SMIM18P0DKX4 95 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 SRIP30626 198 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 RNASE4P34096 147 aaKnown RBP9.61□□□□□ -0.87
HMGN1-208ENST00000443046 ARL16Q0P5N6 197 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 C10orf113Q5VZT2 155 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 LINC00528Q8N1L1 170 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 OR10P1Q8NGE3 313 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 MGST2Q99735 147 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 SLC25A21Q9BQT8 299 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-208ENST00000443046 AGPAT4-IT1Q9H0P7 198 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 MGAT4CQ9UBM8 478 aa9.61□□□□□ -0.87
HMGN1-208ENST00000443046 TRAV5A0A0B4J249 113 aa9.6□□□□□ -0.87
HMGN1-208ENST00000443046 M0R3E3 92 aa9.6□□□□□ -0.87
HMGN1-208ENST00000443046 FAUP35544 74 aaKnown RBP9.6□□□□□ -0.87
HMGN1-208ENST00000443046 ZNF415Q09FC8 603 aa9.6□□□□□ -0.87
HMGN1-208ENST00000443046 Q6ZQT7 251 aa9.6□□□□□ -0.87
HMGN1-208ENST00000443046 TRIM63Q969Q1 353 aa9.6□□□□□ -0.87
HMGN1-208ENST00000443046 GGACTQ9BVM4 153 aa9.6□□□□□ -0.87
HMGN1-208ENST00000443046 DNAJC4Q9NNZ3 241 aa9.6□□□□□ -0.87
HMGN1-208ENST00000443046 RNF213Q63HN8 5207 aa9.6□□□□□ -0.87
HMGN1-208ENST00000443046 IGHV1OR15-1A0A075B7D0 117 aa9.59□□□□□ -0.87
HMGN1-208ENST00000443046 E5RGE8 158 aa9.59□□□□□ -0.87
HMGN1-208ENST00000443046 TAS2R30P59541 319 aa9.59□□□□□ -0.87
HMGN1-208ENST00000443046 KRTAP10-4P60372 401 aaPredicted RBP9.59□□□□□ -0.87
HMGN1-208ENST00000443046 PRR9Q5T870 116 aa9.59□□□□□ -0.87
HMGN1-208ENST00000443046 C9orf47Q6ZRZ4 202 aa9.59□□□□□ -0.87
HMGN1-208ENST00000443046 ZFAND2AQ8N6M9 145 aa9.59□□□□□ -0.87
HMGN1-208ENST00000443046 OR10G4Q8NGN3 311 aa9.59□□□□□ -0.87
HMGN1-208ENST00000443046 DYNC2LI1Q8TCX1 351 aa9.59□□□□□ -0.87
HMGN1-208ENST00000443046 TRBV19A0A075B6N1 114 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 FABP12A6NFH5 140 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 IBA57-AS1B1ANH7 110 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 PSCAO43653 123 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 TSC22D2O75157 780 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 NDUFB4O95168 129 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 ORM1P02763 201 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 GPX1P07203 203 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 GYPEP15421 78 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 TNFSF8P32971 234 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 TIRAPP58753 221 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 UBE2MP61081 183 aaKnown RBP9.58□□□□□ -0.88
HMGN1-208ENST00000443046 ZNF479Q96JC4 524 aa9.58□□□□□ -0.88
HMGN1-208ENST00000443046 RCL1Q9Y2P8 373 aaKnown RBP9.58□□□□□ -0.88
HMGN1-208ENST00000443046 TRGV4A0A0C4DH28 118 aa9.57□□□□□ -0.88
HMGN1-208ENST00000443046 C9orf170A2RU37 121 aa9.57□□□□□ -0.88
HMGN1-208ENST00000443046 RGS13O14921 159 aa9.57□□□□□ -0.88
HMGN1-208ENST00000443046 SFTA3P0C7M3 94 aa9.57□□□□□ -0.88
HMGN1-208ENST00000443046 LINC01556Q5JQF7 62 aa9.57□□□□□ -0.88
HMGN1-208ENST00000443046 DEDD2Q8WXF8 326 aa9.57□□□□□ -0.88
HMGN1-208ENST00000443046 RASL10AQ92737 203 aa9.57□□□□□ -0.88
HMGN1-208ENST00000443046 PRELID1Q9Y255 219 aa9.57□□□□□ -0.88
HMGN1-208ENST00000443046 IGHV3-38A0A0C4DH36 116 aa9.56□□□□□ -0.88
HMGN1-208ENST00000443046 OXTP01178 125 aa9.56□□□□□ -0.88
HMGN1-208ENST00000443046 AP3S2P59780 193 aa9.56□□□□□ -0.88
HMGN1-208ENST00000443046 TOMM5Q8N4H5 51 aa9.56□□□□□ -0.88
HMGN1-208ENST00000443046 MCFD2Q8NI22 146 aa9.56□□□□□ -0.88
HMGN1-208ENST00000443046 RAB2BQ8WUD1 216 aa9.56□□□□□ -0.88
HMGN1-208ENST00000443046 TXNDC17Q9BRA2 123 aa9.56□□□□□ -0.88
HMGN1-208ENST00000443046 SLIRPQ9GZT3 109 aaKnown RBP9.56□□□□□ -0.88
HMGN1-208ENST00000443046 TMEM14CQ9P0S9 112 aa9.56□□□□□ -0.88
HMGN1-208ENST00000443046 PLA2G2DQ9UNK4 145 aa9.56□□□□□ -0.88
HMGN1-208ENST00000443046 CAMLGP49069 296 aa9.55□□□□□ -0.88
HMGN1-208ENST00000443046 PDE6HQ13956 83 aa9.55□□□□□ -0.88
HMGN1-208ENST00000443046 Q6ZRG5 221 aa9.55□□□□□ -0.88
HMGN1-208ENST00000443046 PCNPQ8WW12 178 aaKnown RBP9.55□□□□□ -0.88
HMGN1-208ENST00000443046 ARPC5LQ9BPX5 153 aa9.55□□□□□ -0.88
HMGN1-208ENST00000443046 ZNF492Q9P255 531 aa9.55□□□□□ -0.88
HMGN1-208ENST00000443046 LRP2P98164 4655 aa9.55□□□□□ -0.88
HMGN1-208ENST00000443046 TRBV7-9A0A0J9YWB2 115 aa9.54□□□□□ -0.88
HMGN1-208ENST00000443046 C7orf66A4D0T2 115 aa9.54□□□□□ -0.88
HMGN1-208ENST00000443046 HIST1H1EP10412 219 aaKnown RBP9.54□□□□□ -0.88
HMGN1-208ENST00000443046 MIC13Q5XKP0 118 aa9.54□□□□□ -0.88
HMGN1-208ENST00000443046 SH2D6Q7Z4S9 175 aa9.54□□□□□ -0.88
HMGN1-208ENST00000443046 NRARPQ7Z6K4 114 aa9.54□□□□□ -0.88
HMGN1-208ENST00000443046 OR1L4Q8NGR5 311 aa9.54□□□□□ -0.88
HMGN1-208ENST00000443046 PFDN5Q99471 154 aa9.54□□□□□ -0.88
HMGN1-208ENST00000443046 C9JCJ5 164 aa9.53□□□□□ -0.88
HMGN1-208ENST00000443046 WFDC2Q14508 124 aa9.53□□□□□ -0.88
HMGN1-208ENST00000443046 EXOC3-AS1Q8N2X6 119 aa9.53□□□□□ -0.88
HMGN1-208ENST00000443046 BLNKQ8WV28 456 aa9.53□□□□□ -0.88
HMGN1-208ENST00000443046 SRRQ9GZT4 340 aa9.53□□□□□ -0.88
HMGN1-208ENST00000443046 WDR83OSQ9Y284 106 aa9.53□□□□□ -0.88
HMGN1-208ENST00000443046 IGKV2-40A0A087WW87 121 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-208ENST00000443046 LOC100131303A0A0U1RQF7 123 aa9.52□□□□□ -0.89
HMGN1-208ENST00000443046 IGKV2D-40P01614 121 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-208ENST00000443046 RPL29P47914 159 aaKnown RBP9.52□□□□□ -0.89
HMGN1-208ENST00000443046 TMEM78Q5T7P6 136 aa9.52□□□□□ -0.89
HMGN1-208ENST00000443046 C12orf45Q8N5I9 185 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-208ENST00000443046 CHAC2Q8WUX2 184 aa9.52□□□□□ -0.89
HMGN1-208ENST00000443046 SPXQ9BT56 116 aa9.52□□□□□ -0.89
HMGN1-208ENST00000443046 V9GYH0 126 aa9.52□□□□□ -0.89
HMGN1-208ENST00000443046 TRAV4A0A0B4J268 109 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms