RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 A0A1B0GV50 99 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 AMBPP02760 352 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 PRM2P04554 102 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 CDKN1BP46527 198 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 CSN1S1P47710 185 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 SULT1A2P50226 295 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 UBE2G2P60604 165 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 FAM74A1Q5RGS3 127 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 Q8TAT8 98 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 SFT2D1Q8WV19 159 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 LINC00477Q96M19 166 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 ODF3Q96PU9 254 aa11.58□□□□□ -0.56
USP39-205ENST00000442708 KMT2CQ8NEZ4 4911 aaKnown RBP11.57□□□□□ -0.56
USP39-205ENST00000442708 DNAH7Q8WXX0 4024 aa11.57□□□□□ -0.56
USP39-205ENST00000442708 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
USP39-205ENST00000442708 RBAKDNA6NC62 111 aa11.57□□□□□ -0.56
USP39-205ENST00000442708 J3KRW8 73 aa11.57□□□□□ -0.56
USP39-205ENST00000442708 SLC25A5P05141 298 aaKnown RBP11.57□□□□□ -0.56
USP39-205ENST00000442708 SUMO1P63165 101 aaKnown RBP11.57□□□□□ -0.56
USP39-205ENST00000442708 GOLT1AQ6ZVE7 132 aa11.57□□□□□ -0.56
USP39-205ENST00000442708 RXFP4Q8TDU9 374 aa11.57□□□□□ -0.56
USP39-205ENST00000442708 A0A1W2PRE2 83 aa11.56□□□□□ -0.56
USP39-205ENST00000442708 FAM74A7A6NL05 159 aa11.56□□□□□ -0.56
USP39-205ENST00000442708 INSP01308 110 aa11.56□□□□□ -0.56
USP39-205ENST00000442708 H2AFB1P0C5Y9 115 aa11.56□□□□□ -0.56
USP39-205ENST00000442708 CCL20P78556 96 aa11.56□□□□□ -0.56
USP39-205ENST00000442708 PRR9Q5T870 116 aa11.56□□□□□ -0.56
USP39-205ENST00000442708 GFI1BQ5VTD9 330 aa11.56□□□□□ -0.56
USP39-205ENST00000442708 EIF5AL1Q6IS14 154 aaKnown RBP11.56□□□□□ -0.56
USP39-205ENST00000442708 CMTM2Q8TAZ6 248 aa11.56□□□□□ -0.56
USP39-205ENST00000442708 ZNF492Q9P255 531 aa11.56□□□□□ -0.56
USP39-205ENST00000442708 TRAV8-1A0A0A6YYK1 113 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 MIFP14174 115 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 TSPOP30536 169 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 LEPP41159 167 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 RAB5CP51148 216 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 ZNF138P52744 262 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 TMEM78Q5T7P6 136 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 ALKAL2Q6UX46 152 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 ZFAND2AQ8N6M9 145 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 ARL6IP6Q8N6S5 226 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 C5orf17Q8NAS9 161 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 NEU1Q99519 415 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 C11orf68Q9H3H3 251 aaKnown RBP11.55□□□□□ -0.56
USP39-205ENST00000442708 GOLT1BQ9Y3E0 138 aa11.55□□□□□ -0.56
USP39-205ENST00000442708 ZNF705GA8MUZ8 300 aaPredicted RBP11.54□□□□□ -0.56
USP39-205ENST00000442708 KLLNB2CW77 178 aa11.54□□□□□ -0.56
USP39-205ENST00000442708 TCRAP04437 139 aa11.54□□□□□ -0.56
USP39-205ENST00000442708 CRISP2P16562 243 aa11.54□□□□□ -0.56
USP39-205ENST00000442708 Q6ZQT7 251 aa11.54□□□□□ -0.56
USP39-205ENST00000442708 TVP23CQ96ET8 276 aa11.54□□□□□ -0.56
USP39-205ENST00000442708 SGK494Q96LW2 274 aa11.54□□□□□ -0.56
USP39-205ENST00000442708 EPDR1Q9UM22 224 aa11.54□□□□□ -0.56
USP39-205ENST00000442708 PAGE4O60829 102 aa11.53□□□□□ -0.56
USP39-205ENST00000442708 BTN1A1Q13410 526 aa11.53□□□□□ -0.56
USP39-205ENST00000442708 CCDC28AQ8IWP9 274 aa11.53□□□□□ -0.56
USP39-205ENST00000442708 RYR3Q15413 4870 aa11.52□□□□□ -0.57
USP39-205ENST00000442708 TRAV1-1A0A0B4J248 108 aa11.52□□□□□ -0.57
USP39-205ENST00000442708 TRAV12-3A0A0B4J271 114 aa11.52□□□□□ -0.57
USP39-205ENST00000442708 IGLV2-11P01706 119 aa11.52□□□□□ -0.57
USP39-205ENST00000442708 AZU1P20160 251 aa11.52□□□□□ -0.57
USP39-205ENST00000442708 RNASE4P34096 147 aaKnown RBP11.52□□□□□ -0.57
USP39-205ENST00000442708 ATP5G3P48201 142 aa11.52□□□□□ -0.57
USP39-205ENST00000442708 IL17DQ8TAD2 202 aa11.52□□□□□ -0.57
USP39-205ENST00000442708 MUC7Q8TAX7 377 aa11.52□□□□□ -0.57
USP39-205ENST00000442708 LINC00479Q96M42 142 aa11.52□□□□□ -0.57
USP39-205ENST00000442708 TMEM208Q9BTX3 173 aa11.52□□□□□ -0.57
USP39-205ENST00000442708 C7orf71A4D174 169 aa11.51□□□□□ -0.57
USP39-205ENST00000442708 SMIM9A6NGZ8 99 aa11.51□□□□□ -0.57
USP39-205ENST00000442708 ZNF324O75467 553 aaPredicted RBP11.51□□□□□ -0.57
USP39-205ENST00000442708 LINC01587Q99440 93 aa11.51□□□□□ -0.57
USP39-205ENST00000442708 CELA1Q9UNI1 258 aa11.51□□□□□ -0.57
USP39-205ENST00000442708 TRBV7-9A0A0J9YWB2 115 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 PEX7O00628 323 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 IFNA7P01567 189 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 HBE1P02100 147 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 GPX1P07203 203 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 NMBP08949 121 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 CST9LP1Q5W188 147 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 TMEM256Q8N2U0 113 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 CYB561D1Q8N8Q1 229 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 C20orf144Q9BQM9 153 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 ATG101Q9BSB4 218 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 ARL2-SNX15V9GYD0 113 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 CSMD3Q7Z407 3707 aa11.5□□□□□ -0.57
USP39-205ENST00000442708 TRAV34A0A0B4J273 112 aa11.49□□□□□ -0.57
USP39-205ENST00000442708 LOC102723971A0A1B0GUV8 181 aa11.49□□□□□ -0.57
USP39-205ENST00000442708 SERTM2A0A1B0GWG4 89 aa11.49□□□□□ -0.57
USP39-205ENST00000442708 PLAC8L1A1L4L8 177 aa11.49□□□□□ -0.57
USP39-205ENST00000442708 HTN1P15515 57 aa11.49□□□□□ -0.57
USP39-205ENST00000442708 RRN3P1Q2M238 152 aa11.49□□□□□ -0.57
USP39-205ENST00000442708 NKX6-2Q9C056 277 aaPredicted RBP11.49□□□□□ -0.57
USP39-205ENST00000442708 GNG13Q9P2W3 67 aa11.49□□□□□ -0.57
USP39-205ENST00000442708 PSG8Q9UQ74 426 aa11.49□□□□□ -0.57
USP39-205ENST00000442708 LENEPQ9Y5L5 61 aa11.49□□□□□ -0.57
USP39-205ENST00000442708 F6UZH7 168 aa11.48□□□□□ -0.57
USP39-205ENST00000442708 H7BYZ3 331 aa11.48□□□□□ -0.57
USP39-205ENST00000442708 EMP1P54849 157 aa11.48□□□□□ -0.57
USP39-205ENST00000442708 TAS2R60P59551 318 aa11.48□□□□□ -0.57
USP39-205ENST00000442708 NANOS2P60321 138 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms