RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 LEPP41159 167 aa8.92□□□□□ -0.98
USP1-203ENST00000442679 TMEM78Q5T7P6 136 aa8.92□□□□□ -0.98
USP1-203ENST00000442679 EIF5AL1Q6IS14 154 aaKnown RBP8.92□□□□□ -0.98
USP1-203ENST00000442679 C9orf47Q6ZRZ4 202 aa8.92□□□□□ -0.98
USP1-203ENST00000442679 SLC51BQ86UW2 128 aa8.92□□□□□ -0.98
USP1-203ENST00000442679 Q8NAQ8 132 aa8.92□□□□□ -0.98
USP1-203ENST00000442679 MUC7Q8TAX7 377 aa8.92□□□□□ -0.98
USP1-203ENST00000442679 FAM213BQ8TBF2 198 aa8.92□□□□□ -0.98
USP1-203ENST00000442679 ODF3Q96PU9 254 aa8.92□□□□□ -0.98
USP1-203ENST00000442679 NEU1Q99519 415 aa8.92□□□□□ -0.98
USP1-203ENST00000442679 TMEM208Q9BTX3 173 aa8.92□□□□□ -0.98
USP1-203ENST00000442679 MAP1LC3BQ9GZQ8 125 aa8.92□□□□□ -0.98
USP1-203ENST00000442679 RBAKDNA6NC62 111 aa8.91□□□□□ -0.98
USP1-203ENST00000442679 SMIM9A6NGZ8 99 aa8.91□□□□□ -0.98
USP1-203ENST00000442679 SLC25A5P05141 298 aaKnown RBP8.91□□□□□ -0.98
USP1-203ENST00000442679 RBMY1A1P0DJD3 496 aaKnown RBP8.91□□□□□ -0.98
USP1-203ENST00000442679 RBMY1CP0DJD4 496 aa8.91□□□□□ -0.98
USP1-203ENST00000442679 RBMY1FQ15415 496 aaKnown RBP8.91□□□□□ -0.98
USP1-203ENST00000442679 DPPA3Q6W0C5 159 aa8.91□□□□□ -0.98
USP1-203ENST00000442679 ARL6IP6Q8N6S5 226 aa8.91□□□□□ -0.98
USP1-203ENST00000442679 C11orf68Q9H3H3 251 aaKnown RBP8.91□□□□□ -0.98
USP1-203ENST00000442679 RPH3ALQ9UNE2 315 aa8.91□□□□□ -0.98
USP1-203ENST00000442679 CSMD3Q7Z407 3707 aa8.9□□□□□ -0.98
USP1-203ENST00000442679 C3orf84H3BNL1 204 aa8.9□□□□□ -0.98
USP1-203ENST00000442679 J3KRW8 73 aa8.9□□□□□ -0.98
USP1-203ENST00000442679 ZNF138P52744 262 aa8.9□□□□□ -0.98
USP1-203ENST00000442679 NKX2-5P52952 324 aaPredicted RBP8.9□□□□□ -0.98
USP1-203ENST00000442679 SUMO1P63165 101 aaKnown RBP8.9□□□□□ -0.98
USP1-203ENST00000442679 KIR3DS1Q14943 382 aa8.9□□□□□ -0.98
USP1-203ENST00000442679 GOLT1AQ6ZVE7 132 aa8.9□□□□□ -0.98
USP1-203ENST00000442679 IL17DQ8TAD2 202 aa8.9□□□□□ -0.98
USP1-203ENST00000442679 SFT2D1Q8WV19 159 aa8.9□□□□□ -0.98
USP1-203ENST00000442679 MBD3L1Q8WWY6 194 aa8.9□□□□□ -0.98
USP1-203ENST00000442679 LINC01587Q99440 93 aa8.9□□□□□ -0.98
USP1-203ENST00000442679 ZNF492Q9P255 531 aa8.9□□□□□ -0.98
USP1-203ENST00000442679 A0A1W2PRE2 83 aa8.89□□□□□ -0.99
USP1-203ENST00000442679 GGTLC3B5MD39 225 aa8.89□□□□□ -0.99
USP1-203ENST00000442679 HBE1P02100 147 aa8.89□□□□□ -0.99
USP1-203ENST00000442679 H2AFB1P0C5Y9 115 aa8.89□□□□□ -0.99
USP1-203ENST00000442679 RAB5CP51148 216 aa8.89□□□□□ -0.99
USP1-203ENST00000442679 UBE2G2P60604 165 aa8.89□□□□□ -0.99
USP1-203ENST00000442679 GNG5P63218 68 aa8.89□□□□□ -0.99
USP1-203ENST00000442679 GFI1BQ5VTD9 330 aa8.89□□□□□ -0.99
USP1-203ENST00000442679 TMEM256Q8N2U0 113 aa8.89□□□□□ -0.99
USP1-203ENST00000442679 C5orf17Q8NAS9 161 aa8.89□□□□□ -0.99
USP1-203ENST00000442679 FAM19A4Q96LR4 140 aa8.89□□□□□ -0.99
USP1-203ENST00000442679 YTHDF2Q9Y5A9 579 aaKnown RBP8.89□□□□□ -0.99
USP1-203ENST00000442679 TRAV12-3A0A0B4J271 114 aa8.88□□□□□ -0.99
USP1-203ENST00000442679 A0A1B0GV50 99 aa8.88□□□□□ -0.99
USP1-203ENST00000442679 ZNF705GA8MUZ8 300 aaPredicted RBP8.88□□□□□ -0.99
USP1-203ENST00000442679 GPX1P07203 203 aa8.88□□□□□ -0.99
USP1-203ENST00000442679 NMBP08949 121 aa8.88□□□□□ -0.99
USP1-203ENST00000442679 RNASE4P34096 147 aaKnown RBP8.88□□□□□ -0.99
USP1-203ENST00000442679 RRN3P1Q2M238 152 aa8.88□□□□□ -0.99
USP1-203ENST00000442679 ZFAND6Q6FIF0 208 aa8.88□□□□□ -0.99
USP1-203ENST00000442679 Q8TAT8 98 aa8.88□□□□□ -0.99
USP1-203ENST00000442679 C11orf45Q8TAV5 145 aa8.88□□□□□ -0.99
USP1-203ENST00000442679 C20orf144Q9BQM9 153 aa8.88□□□□□ -0.99
USP1-203ENST00000442679 EPDR1Q9UM22 224 aa8.88□□□□□ -0.99
USP1-203ENST00000442679 STARD9Q9P2P6 4700 aa8.88□□□□□ -0.99
USP1-203ENST00000442679 DYNC2H1Q8NCM8 4307 aaKnown RBP8.87□□□□□ -0.99
USP1-203ENST00000442679 TRBV7-9A0A0J9YWB2 115 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 LOC102723971A0A1B0GUV8 181 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 TMEM189A5PLL7 270 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 FAM74A7A6NL05 159 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 KLLNB2CW77 178 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 H7BYZ3 331 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 IFNA7P01567 189 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 TCRAP04437 139 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 PRM2P04554 102 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 HTN1P15515 57 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 CRISP2P16562 243 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 SULT1A2P50226 295 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 EMP1P54849 157 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 TAS2R60P59551 318 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 NIPSNAP3BQ9BS92 247 aa8.87□□□□□ -0.99
USP1-203ENST00000442679 NKX6-2Q9C056 277 aaPredicted RBP8.87□□□□□ -0.99
USP1-203ENST00000442679 TRAV8-1A0A0A6YYK1 113 aa8.86□□□□□ -0.99
USP1-203ENST00000442679 SERTM2A0A1B0GWG4 89 aa8.86□□□□□ -0.99
USP1-203ENST00000442679 C7orf71A4D174 169 aa8.86□□□□□ -0.99
USP1-203ENST00000442679 K7EQM0 130 aa8.86□□□□□ -0.99
USP1-203ENST00000442679 AZU1P20160 251 aa8.86□□□□□ -0.99
USP1-203ENST00000442679 NANOS2P60321 138 aaKnown RBP8.86□□□□□ -0.99
USP1-203ENST00000442679 BTN1A1Q13410 526 aa8.86□□□□□ -0.99
USP1-203ENST00000442679 PMS2P11Q13670 270 aa8.86□□□□□ -0.99
USP1-203ENST00000442679 CASC10Q5T4H9 136 aa8.86□□□□□ -0.99
USP1-203ENST00000442679 ZFAND2AQ8N6M9 145 aa8.86□□□□□ -0.99
USP1-203ENST00000442679 LENEPQ9Y5L5 61 aa8.86□□□□□ -0.99
USP1-203ENST00000442679 CXorf65A6NEN9 183 aa8.85□□□□□ -0.99
USP1-203ENST00000442679 PAGE4O60829 102 aa8.85□□□□□ -0.99
USP1-203ENST00000442679 ZNF324O75467 553 aaPredicted RBP8.85□□□□□ -0.99
USP1-203ENST00000442679 PRR9Q5T870 116 aa8.85□□□□□ -0.99
USP1-203ENST00000442679 CST9LP1Q5W188 147 aa8.85□□□□□ -0.99
USP1-203ENST00000442679 CYB561D1Q8N8Q1 229 aa8.85□□□□□ -0.99
USP1-203ENST00000442679 SGK494Q96LW2 274 aa8.85□□□□□ -0.99
USP1-203ENST00000442679 ATG101Q9BSB4 218 aa8.85□□□□□ -0.99
USP1-203ENST00000442679 TRAV1-1A0A0B4J248 108 aa8.84□□□□□ -0.99
USP1-203ENST00000442679 TEX46H3BTG2 121 aa8.84□□□□□ -0.99
USP1-203ENST00000442679 SPART-AS1P0CW21 52 aa8.84□□□□□ -0.99
USP1-203ENST00000442679 PPT1P50897 306 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms